Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01045 and ABZR86_RS01050 are separated by 70 nucleotides ABZR86_RS01050 and ABZR86_RS01055 are separated by 2 nucleotides ABZR86_RS01055 and ABZR86_RS01060 are separated by 51 nucleotides
ABZR86_RS01045: ABZR86_RS01045 - response regulator transcription factor, at 206,399 to 207,037
_RS01045
ABZR86_RS01050: ABZR86_RS01050 - response regulator transcription factor, at 207,108 to 207,737
_RS01050
ABZR86_RS01055: ABZR86_RS01055 - CHASE2 domain-containing protein, at 207,740 to 208,891
_RS01055
ABZR86_RS01060: ABZR86_RS01060 - FecR domain-containing protein, at 208,943 to 210,640
_RS01060
Position (kb) 207
208
209 Strain fitness (log2 ratio) -2
-1
0
1
2 at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.008 kb on + strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.009 kb on - strand at 207.014 kb on + strand at 207.015 kb on - strand at 207.091 kb on + strand at 207.092 kb on - strand at 207.092 kb on - strand at 207.097 kb on + strand at 207.098 kb on - strand at 207.098 kb on - strand at 207.098 kb on - strand at 207.113 kb on + strand at 207.114 kb on - strand at 207.477 kb on + strand, within ABZR86_RS01050 at 207.477 kb on + strand, within ABZR86_RS01050 at 207.477 kb on + strand, within ABZR86_RS01050 at 207.478 kb on - strand, within ABZR86_RS01050 at 207.478 kb on - strand, within ABZR86_RS01050 at 207.924 kb on + strand, within ABZR86_RS01055 at 207.924 kb on + strand, within ABZR86_RS01055 at 207.925 kb on - strand, within ABZR86_RS01055 at 207.925 kb on - strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.176 kb on + strand, within ABZR86_RS01055 at 208.177 kb on - strand, within ABZR86_RS01055 at 208.177 kb on - strand, within ABZR86_RS01055 at 208.227 kb on + strand, within ABZR86_RS01055 at 208.227 kb on + strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.228 kb on - strand, within ABZR86_RS01055 at 208.248 kb on + strand, within ABZR86_RS01055 at 208.248 kb on + strand, within ABZR86_RS01055 at 208.604 kb on - strand, within ABZR86_RS01055 at 208.746 kb on + strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.747 kb on - strand, within ABZR86_RS01055 at 208.772 kb on + strand, within ABZR86_RS01055 at 208.773 kb on + strand, within ABZR86_RS01055 at 208.773 kb on + strand, within ABZR86_RS01055 at 208.773 kb on + strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 208.774 kb on - strand, within ABZR86_RS01055 at 209.000 kb on + strand at 209.046 kb on + strand at 209.046 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.079 kb on + strand at 209.080 kb on - strand at 209.080 kb on - strand at 209.080 kb on - strand at 209.080 kb on - strand at 209.131 kb on + strand, within ABZR86_RS01060 at 209.184 kb on + strand, within ABZR86_RS01060 at 209.185 kb on - strand, within ABZR86_RS01060 at 209.305 kb on - strand, within ABZR86_RS01060 at 209.350 kb on - strand, within ABZR86_RS01060 at 209.350 kb on - strand, within ABZR86_RS01060 at 209.350 kb on - strand, within ABZR86_RS01060 at 209.352 kb on + strand, within ABZR86_RS01060 at 209.352 kb on + strand, within ABZR86_RS01060 at 209.353 kb on - strand, within ABZR86_RS01060 at 209.460 kb on + strand, within ABZR86_RS01060 at 209.460 kb on + strand, within ABZR86_RS01060 at 209.460 kb on + strand, within ABZR86_RS01060 at 209.461 kb on - strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.640 kb on + strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.641 kb on - strand, within ABZR86_RS01060 at 209.742 kb on + strand, within ABZR86_RS01060
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 207,008 + +0.9 207,008 + +0.2 207,008 + +0.6 207,008 + +0.7 207,008 + -0.1 207,008 + +0.4 207,008 + +0.6 207,008 + +0.5 207,008 + +0.7 207,008 + +0.4 207,008 + +0.0 207,008 + +0.4 207,008 + +1.7 207,008 + -0.2 207,008 + -0.4 207,008 + +0.2 207,009 - +0.4 207,009 - -0.6 207,009 - +0.4 207,009 - +0.2 207,009 - +0.9 207,009 - +0.1 207,009 - +0.1 207,009 - -0.6 207,009 - -0.5 207,009 - -0.7 207,009 - +0.6 207,009 - -0.3 207,009 - +0.3 207,009 - -0.1 207,009 - -0.4 207,009 - -1.3 207,009 - -0.9 207,009 - +0.2 207,009 - -0.6 207,009 - +0.2 207,009 - -1.0 207,014 + -0.6 207,015 - -1.2 207,091 + -1.4 207,092 - +0.1 207,092 - -0.3 207,097 + +0.5 207,098 - +0.0 207,098 - -0.1 207,098 - +0.4 207,113 + -1.9 207,114 - -0.2 207,477 + ABZR86_RS01050 0.59 -0.6 207,477 + ABZR86_RS01050 0.59 -0.3 207,477 + ABZR86_RS01050 0.59 +1.7 207,478 - ABZR86_RS01050 0.59 +0.8 207,478 - ABZR86_RS01050 0.59 +0.2 207,924 + ABZR86_RS01055 0.16 -0.4 207,924 + ABZR86_RS01055 0.16 +1.0 207,925 - ABZR86_RS01055 0.16 +1.2 207,925 - ABZR86_RS01055 0.16 +1.2 208,176 + ABZR86_RS01055 0.38 +1.5 208,176 + ABZR86_RS01055 0.38 +0.7 208,176 + ABZR86_RS01055 0.38 +0.5 208,176 + ABZR86_RS01055 0.38 +0.5 208,177 - ABZR86_RS01055 0.38 -0.4 208,177 - ABZR86_RS01055 0.38 +2.1 208,227 + ABZR86_RS01055 0.42 +1.3 208,227 + ABZR86_RS01055 0.42 -0.5 208,228 - ABZR86_RS01055 0.42 -1.1 208,228 - ABZR86_RS01055 0.42 +2.6 208,228 - ABZR86_RS01055 0.42 +0.0 208,228 - ABZR86_RS01055 0.42 -0.3 208,228 - ABZR86_RS01055 0.42 +0.9 208,248 + ABZR86_RS01055 0.44 +0.0 208,248 + ABZR86_RS01055 0.44 -2.5 208,604 - ABZR86_RS01055 0.75 +0.6 208,746 + ABZR86_RS01055 0.87 +1.0 208,747 - ABZR86_RS01055 0.87 +0.1 208,747 - ABZR86_RS01055 0.87 +0.2 208,747 - ABZR86_RS01055 0.87 -0.5 208,747 - ABZR86_RS01055 0.87 +0.4 208,747 - ABZR86_RS01055 0.87 +0.9 208,772 + ABZR86_RS01055 0.90 -0.7 208,773 + ABZR86_RS01055 0.90 +0.6 208,773 + ABZR86_RS01055 0.90 -0.3 208,773 + ABZR86_RS01055 0.90 +0.4 208,774 - ABZR86_RS01055 0.90 +0.5 208,774 - ABZR86_RS01055 0.90 -0.6 208,774 - ABZR86_RS01055 0.90 -0.4 208,774 - ABZR86_RS01055 0.90 +0.3 208,774 - ABZR86_RS01055 0.90 +0.5 208,774 - ABZR86_RS01055 0.90 -1.7 208,774 - ABZR86_RS01055 0.90 -1.1 209,000 + +0.5 209,046 + -0.8 209,046 + -0.6 209,079 + +0.0 209,079 + +0.4 209,079 + +0.2 209,079 + +0.2 209,079 + +1.1 209,079 + -1.0 209,080 - -0.4 209,080 - -0.6 209,080 - +1.2 209,080 - +1.7 209,131 + ABZR86_RS01060 0.11 -2.3 209,184 + ABZR86_RS01060 0.14 +1.5 209,185 - ABZR86_RS01060 0.14 -0.6 209,305 - ABZR86_RS01060 0.21 -0.9 209,350 - ABZR86_RS01060 0.24 +0.0 209,350 - ABZR86_RS01060 0.24 -0.9 209,350 - ABZR86_RS01060 0.24 +0.5 209,352 + ABZR86_RS01060 0.24 +0.9 209,352 + ABZR86_RS01060 0.24 -0.2 209,353 - ABZR86_RS01060 0.24 -1.9 209,460 + ABZR86_RS01060 0.30 -0.2 209,460 + ABZR86_RS01060 0.30 -0.1 209,460 + ABZR86_RS01060 0.30 -0.1 209,461 - ABZR86_RS01060 0.31 -0.0 209,640 + ABZR86_RS01060 0.41 +0.2 209,640 + ABZR86_RS01060 0.41 +0.5 209,640 + ABZR86_RS01060 0.41 -0.3 209,640 + ABZR86_RS01060 0.41 +0.5 209,641 - ABZR86_RS01060 0.41 +1.1 209,641 - ABZR86_RS01060 0.41 +1.1 209,641 - ABZR86_RS01060 0.41 -0.3 209,641 - ABZR86_RS01060 0.41 +0.1 209,641 - ABZR86_RS01060 0.41 -0.0 209,641 - ABZR86_RS01060 0.41 -0.1 209,742 + ABZR86_RS01060 0.47 -0.2
Or see this region's nucleotide sequence