Experiment: Fusidic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00475 and ABZR86_RS00480 are separated by 89 nucleotides ABZR86_RS00480 and ABZR86_RS00485 overlap by 16 nucleotides
ABZR86_RS00475: ABZR86_RS00475 - methionine ABC transporter ATP-binding protein, at 91,084 to 92,094
_RS00475
ABZR86_RS00480: ABZR86_RS00480 - glutathione peroxidase, at 92,184 to 92,669
_RS00480
ABZR86_RS00485: ABZR86_RS00485 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 92,654 to 94,225
_RS00485
Position (kb) 92
93 Strain fitness (log2 ratio) -1
0
1
2 at 91.323 kb on + strand, within ABZR86_RS00475 at 91.324 kb on - strand, within ABZR86_RS00475 at 91.324 kb on - strand, within ABZR86_RS00475 at 91.325 kb on + strand, within ABZR86_RS00475 at 91.326 kb on - strand, within ABZR86_RS00475 at 91.326 kb on - strand, within ABZR86_RS00475 at 91.326 kb on - strand, within ABZR86_RS00475 at 91.326 kb on - strand, within ABZR86_RS00475 at 91.682 kb on + strand, within ABZR86_RS00475 at 92.129 kb on + strand at 92.130 kb on - strand at 92.130 kb on - strand at 92.130 kb on - strand at 92.130 kb on - strand at 92.153 kb on - strand at 92.169 kb on + strand at 92.197 kb on - strand at 92.307 kb on + strand, within ABZR86_RS00480 at 92.439 kb on + strand, within ABZR86_RS00480 at 92.502 kb on + strand, within ABZR86_RS00480 at 92.785 kb on - strand at 92.785 kb on - strand at 92.785 kb on - strand at 92.838 kb on + strand, within ABZR86_RS00485 at 92.838 kb on + strand, within ABZR86_RS00485 at 92.963 kb on + strand, within ABZR86_RS00485 at 92.976 kb on + strand, within ABZR86_RS00485 at 93.223 kb on - strand, within ABZR86_RS00485 at 93.480 kb on + strand, within ABZR86_RS00485 at 93.480 kb on + strand, within ABZR86_RS00485 at 93.481 kb on - strand, within ABZR86_RS00485 at 93.481 kb on - strand, within ABZR86_RS00485
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml remove 91,323 + ABZR86_RS00475 0.24 +0.5 91,324 - ABZR86_RS00475 0.24 -0.2 91,324 - ABZR86_RS00475 0.24 -0.5 91,325 + ABZR86_RS00475 0.24 -0.9 91,326 - ABZR86_RS00475 0.24 +1.3 91,326 - ABZR86_RS00475 0.24 +0.2 91,326 - ABZR86_RS00475 0.24 -0.2 91,326 - ABZR86_RS00475 0.24 -0.7 91,682 + ABZR86_RS00475 0.59 +0.3 92,129 + -0.9 92,130 - +0.6 92,130 - +1.8 92,130 - +1.3 92,130 - -0.0 92,153 - -0.2 92,169 + +0.9 92,197 - +0.2 92,307 + ABZR86_RS00480 0.25 +0.2 92,439 + ABZR86_RS00480 0.52 -0.3 92,502 + ABZR86_RS00480 0.65 +0.3 92,785 - +0.2 92,785 - -0.1 92,785 - +0.1 92,838 + ABZR86_RS00485 0.12 -1.0 92,838 + ABZR86_RS00485 0.12 +0.8 92,963 + ABZR86_RS00485 0.20 -1.0 92,976 + ABZR86_RS00485 0.20 -0.3 93,223 - ABZR86_RS00485 0.36 -0.8 93,480 + ABZR86_RS00485 0.53 -0.2 93,480 + ABZR86_RS00485 0.53 -0.1 93,481 - ABZR86_RS00485 0.53 -0.6 93,481 - ABZR86_RS00485 0.53 -0.1
Or see this region's nucleotide sequence