Experiment: MoYLS4 with Dimethyl Sulfoxide 7.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2760 and DvMF_2761 are separated by 262 nucleotides DvMF_2761 and DvMF_2762 are separated by 209 nucleotides DvMF_2762 and DvMF_2763 are separated by 460 nucleotides
DvMF_2760: DvMF_2760 - hypothetical protein (RefSeq), at 3,490,625 to 3,491,650
_2760
DvMF_2761: DvMF_2761 - hypothetical protein (RefSeq), at 3,491,913 to 3,492,314
_2761
DvMF_2762: DvMF_2762 - diguanylate cyclase with hemerythrin-like metal-binding domain (RefSeq), at 3,492,524 to 3,494,419
_2762
DvMF_2763: DvMF_2763 - ABC-type tungstate transport system, permease component (RefSeq), at 3,494,880 to 3,495,704
_2763
Position (kb)
3492
3493
3494
3495 Strain fitness (log2 ratio)
-1
0
1 at 3491.591 kb on - strand at 3491.683 kb on - strand at 3491.903 kb on + strand at 3491.970 kb on + strand, within DvMF_2761 at 3492.574 kb on - strand at 3492.665 kb on - strand at 3492.935 kb on + strand, within DvMF_2762 at 3493.066 kb on + strand, within DvMF_2762 at 3493.074 kb on - strand, within DvMF_2762 at 3493.160 kb on + strand, within DvMF_2762 at 3493.359 kb on + strand, within DvMF_2762 at 3493.458 kb on + strand, within DvMF_2762 at 3493.565 kb on + strand, within DvMF_2762 at 3493.575 kb on + strand, within DvMF_2762 at 3493.669 kb on - strand, within DvMF_2762 at 3493.823 kb on - strand, within DvMF_2762 at 3493.874 kb on - strand, within DvMF_2762 at 3493.908 kb on + strand, within DvMF_2762 at 3493.916 kb on - strand, within DvMF_2762 at 3493.916 kb on - strand, within DvMF_2762 at 3493.916 kb on - strand, within DvMF_2762 at 3494.144 kb on - strand, within DvMF_2762 at 3494.265 kb on - strand at 3494.286 kb on - strand at 3494.429 kb on - strand at 3494.472 kb on + strand at 3494.472 kb on + strand at 3494.480 kb on - strand at 3494.664 kb on + strand at 3494.665 kb on - strand at 3494.957 kb on - strand at 3494.957 kb on - strand at 3495.097 kb on - strand, within DvMF_2763 at 3495.107 kb on - strand, within DvMF_2763 at 3495.216 kb on - strand, within DvMF_2763 at 3495.320 kb on + strand, within DvMF_2763
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Dimethyl Sulfoxide 7.5 % remove 3,491,591 - -0.1 3,491,683 - -0.5 3,491,903 + -0.6 3,491,970 + DvMF_2761 0.14 -0.4 3,492,574 - -0.3 3,492,665 - -0.0 3,492,935 + DvMF_2762 0.22 -0.7 3,493,066 + DvMF_2762 0.29 -0.3 3,493,074 - DvMF_2762 0.29 -0.2 3,493,160 + DvMF_2762 0.34 -0.3 3,493,359 + DvMF_2762 0.44 -0.4 3,493,458 + DvMF_2762 0.49 +0.2 3,493,565 + DvMF_2762 0.55 -0.7 3,493,575 + DvMF_2762 0.55 -0.8 3,493,669 - DvMF_2762 0.60 +0.0 3,493,823 - DvMF_2762 0.69 -0.8 3,493,874 - DvMF_2762 0.71 +0.2 3,493,908 + DvMF_2762 0.73 -1.2 3,493,916 - DvMF_2762 0.73 -0.5 3,493,916 - DvMF_2762 0.73 -0.9 3,493,916 - DvMF_2762 0.73 -0.6 3,494,144 - DvMF_2762 0.85 -0.9 3,494,265 - -0.5 3,494,286 - -0.7 3,494,429 - -0.6 3,494,472 + -0.3 3,494,472 + -0.5 3,494,480 - -0.3 3,494,664 + -0.5 3,494,665 - -0.4 3,494,957 - -0.6 3,494,957 - -0.3 3,495,097 - DvMF_2763 0.26 -0.7 3,495,107 - DvMF_2763 0.28 -0.0 3,495,216 - DvMF_2763 0.41 -0.0 3,495,320 + DvMF_2763 0.53 +0.0
Or see this region's nucleotide sequence