Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2558
Experiment: MoYLS4 with Dimethyl Sulfoxide 7.5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Dimethyl Sulfoxide 7.5 % |
---|---|---|---|---|---|
remove | |||||
3,232,858 | + | +0.4 | |||
3,233,051 | + | -0.1 | |||
3,233,066 | + | +0.5 | |||
3,233,074 | - | -0.0 | |||
3,233,076 | + | +0.6 | |||
3,233,076 | + | +0.6 | |||
3,233,076 | + | +0.7 | |||
3,233,155 | + | -0.5 | |||
3,233,400 | + | DvMF_2558 | 0.19 | -0.7 | |
3,233,444 | - | DvMF_2558 | 0.22 | -1.0 | |
3,233,574 | + | DvMF_2558 | 0.31 | -1.0 | |
3,233,579 | + | DvMF_2558 | 0.31 | +2.0 | |
3,233,905 | - | DvMF_2558 | 0.54 | -1.1 | |
3,234,079 | - | DvMF_2558 | 0.67 | -1.0 | |
3,234,090 | + | DvMF_2558 | 0.67 | -1.4 | |
3,234,330 | + | DvMF_2558 | 0.84 | -1.0 | |
3,234,416 | - | -1.5 | |||
3,234,552 | - | +1.0 | |||
3,234,775 | - | -0.0 | |||
3,235,216 | - | DvMF_2559 | 0.19 | -0.7 | |
3,235,266 | - | DvMF_2559 | 0.26 | +0.0 | |
3,235,325 | + | DvMF_2559 | 0.34 | -0.1 | |
3,235,325 | + | DvMF_2559 | 0.34 | -0.1 | |
3,235,333 | - | DvMF_2559 | 0.35 | -0.8 | |
3,235,333 | - | DvMF_2559 | 0.35 | -0.3 | |
3,235,346 | - | DvMF_2559 | 0.36 | -0.7 | |
3,235,451 | - | DvMF_2559 | 0.50 | -0.6 |
Or see this region's nucleotide sequence