Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2935

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
3,424,710	+				+4.3
3,424,721	+				+0.4
3,424,743	+				+0.1
3,424,744	-				+1.0
3,424,788	+				-0.5
3,424,788	+				+0.3
3,424,834	+				+0.6
3,424,834	+				+0.7
3,424,834	+				+0.5
3,424,835	-				-0.3
3,424,835	-				+0.9
3,424,835	-				-0.9
3,424,839	+				+1.4
3,424,839	+				-0.3
3,424,839	+				-0.7
3,424,839	+				+0.7
3,424,839	+				-0.0
3,424,839	+				-0.3
3,424,839	+				-0.5
3,424,840	-				+0.6
3,424,840	-				-0.5
3,425,060	+		Pf6N2E2_2934	0.26	+0.1
3,425,060	+		Pf6N2E2_2934	0.26	+0.7
3,425,211	-		Pf6N2E2_2934	0.48	+0.8
3,425,364	-		Pf6N2E2_2934	0.71	+1.0
3,425,364	-		Pf6N2E2_2934	0.71	-1.5
3,425,583	+				+0.5
3,425,584	-				-0.2
3,425,584	-				-1.2
3,425,599	+				-0.7
3,425,600	-				+0.2
3,425,600	-				+0.8
3,425,622	+				+1.1
3,425,623	-				+0.5
3,425,624	+				-0.9
3,425,624	+				+0.9
3,425,624	+				-0.7
3,425,624	+				-1.0
3,425,686	+				+0.1
3,425,808	+				-0.7
3,425,847	+		Pf6N2E2_2935	0.10	-0.8
3,425,847	+		Pf6N2E2_2935	0.10	-0.8
3,425,847	+		Pf6N2E2_2935	0.10	+1.0
3,425,848	-		Pf6N2E2_2935	0.10	-2.1
3,425,848	-		Pf6N2E2_2935	0.10	-1.2
3,425,848	-		Pf6N2E2_2935	0.10	+0.3
3,425,848	-		Pf6N2E2_2935	0.10	-0.2
3,425,937	+		Pf6N2E2_2935	0.16	-0.5
3,425,937	+		Pf6N2E2_2935	0.16	-1.1
3,425,938	-		Pf6N2E2_2935	0.16	-0.6
3,425,947	+		Pf6N2E2_2935	0.16	-1.1
3,425,948	-		Pf6N2E2_2935	0.16	-1.5
3,426,086	+		Pf6N2E2_2935	0.25	-1.5
3,426,189	+		Pf6N2E2_2935	0.31	+0.0
3,426,190	-		Pf6N2E2_2935	0.31	-1.0
3,426,273	+		Pf6N2E2_2935	0.37	-1.4
3,426,273	+		Pf6N2E2_2935	0.37	-0.4
3,426,274	-		Pf6N2E2_2935	0.37	-1.0
3,426,274	-		Pf6N2E2_2935	0.37	-1.3
3,426,274	-		Pf6N2E2_2935	0.37	-1.8
3,426,361	+		Pf6N2E2_2935	0.42	-1.4
3,426,361	+		Pf6N2E2_2935	0.42	+0.5
3,426,362	-		Pf6N2E2_2935	0.42	-0.5
3,426,519	+		Pf6N2E2_2935	0.52	-0.4
3,426,519	+		Pf6N2E2_2935	0.52	-0.1
3,426,520	-		Pf6N2E2_2935	0.52	-0.5
3,426,520	-		Pf6N2E2_2935	0.52	+0.1
3,426,520	-		Pf6N2E2_2935	0.52	-2.2
3,426,520	-		Pf6N2E2_2935	0.52	-0.5
3,426,520	-		Pf6N2E2_2935	0.52	-1.1
3,426,520	-		Pf6N2E2_2935	0.52	-1.9
3,426,520	-		Pf6N2E2_2935	0.52	+0.5
3,426,520	-		Pf6N2E2_2935	0.52	-0.4
3,426,600	+		Pf6N2E2_2935	0.57	-0.2
3,426,600	+		Pf6N2E2_2935	0.57	-1.3
3,426,633	+		Pf6N2E2_2935	0.59	-0.4
3,426,672	+		Pf6N2E2_2935	0.61	-1.9
3,426,820	-		Pf6N2E2_2935	0.71	-1.6
3,426,893	+		Pf6N2E2_2935	0.75	-0.6
3,426,893	+		Pf6N2E2_2935	0.75	-0.3
3,426,893	+		Pf6N2E2_2935	0.75	-1.2
3,426,893	+		Pf6N2E2_2935	0.75	-0.8
3,426,893	+		Pf6N2E2_2935	0.75	-1.0
3,426,897	+		Pf6N2E2_2935	0.75	-1.3
3,426,897	+		Pf6N2E2_2935	0.75	-0.2
3,426,897	+		Pf6N2E2_2935	0.75	+0.7
3,426,897	+		Pf6N2E2_2935	0.75	+0.1
3,426,898	-		Pf6N2E2_2935	0.75	-1.0
3,426,898	-		Pf6N2E2_2935	0.75	-0.6
3,426,975	+		Pf6N2E2_2935	0.80	-0.5
3,427,209	+				-0.5
3,427,314	+				+0.1
3,427,314	+				+0.2
3,427,314	+				-0.4
3,427,314	+				+0.5
3,427,314	+				+0.3
3,427,315	-				-0.2
3,427,315	-				+0.1
3,427,315	-				-0.1
3,427,315	-				+0.3
3,427,315	-				+0.3
3,427,318	+				-0.4
3,427,318	+				+0.6
3,427,318	+				-0.8
3,427,318	+				+0.6
3,427,319	-				+1.0
3,427,319	-				+0.6
3,427,377	+				+0.1
3,427,532	+				+0.3
3,427,562	+		Pf6N2E2_2936	0.11	+0.9
3,427,563	-		Pf6N2E2_2936	0.11	+1.2
3,427,565	+		Pf6N2E2_2936	0.11	+0.3
3,427,565	+		Pf6N2E2_2936	0.11	+0.9
3,427,566	-		Pf6N2E2_2936	0.11	+0.2
3,427,718	+		Pf6N2E2_2936	0.25	-0.4
3,427,719	-		Pf6N2E2_2936	0.25	+0.7
3,427,719	-				+1.0
3,427,865	+		Pf6N2E2_2936	0.38	-0.1
3,427,865	+		Pf6N2E2_2936	0.38	+0.2
3,427,866	-		Pf6N2E2_2936	0.39	-0.5
3,427,937	+		Pf6N2E2_2936	0.45	-1.5
3,427,937	+		Pf6N2E2_2936	0.45	+0.8
3,427,937	+		Pf6N2E2_2936	0.45	+0.8
3,427,937	+		Pf6N2E2_2936	0.45	-0.7
3,427,937	+		Pf6N2E2_2936	0.45	+0.6
3,427,937	+		Pf6N2E2_2936	0.45	+0.4
3,427,937	+		Pf6N2E2_2936	0.45	-0.1
3,427,938	-		Pf6N2E2_2936	0.45	+0.2
3,427,938	-		Pf6N2E2_2936	0.45	-0.5
3,427,938	-		Pf6N2E2_2936	0.45	-1.2
3,427,938	-		Pf6N2E2_2936	0.45	+0.7
3,427,938	-		Pf6N2E2_2936	0.45	-1.0
3,427,938	-		Pf6N2E2_2936	0.45	+1.0
3,427,959	+		Pf6N2E2_2936	0.47	+0.7
3,428,081	+		Pf6N2E2_2936	0.58	+0.2
3,428,142	-		Pf6N2E2_2936	0.64	-0.0
3,428,142	-		Pf6N2E2_2936	0.64	+0.2
3,428,142	-		Pf6N2E2_2936	0.64	+0.1
3,428,152	-		Pf6N2E2_2936	0.65	+1.7
3,428,183	+		Pf6N2E2_2936	0.67	-0.5
3,428,183	+		Pf6N2E2_2936	0.67	+0.2
3,428,184	-		Pf6N2E2_2936	0.68	+0.1
3,428,267	+		Pf6N2E2_2936	0.75	-0.2
3,428,267	+		Pf6N2E2_2936	0.75	-0.2
3,428,268	-		Pf6N2E2_2936	0.75	+0.0
3,428,268	-		Pf6N2E2_2936	0.75	-0.3