Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2172

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,576,360	-		Pf6N2E2_2170	0.73	+0.3
2,576,418	+		Pf6N2E2_2170	0.78	-0.3
2,576,419	-		Pf6N2E2_2170	0.78	-0.4
2,576,476	-		Pf6N2E2_2170	0.83	-0.9
2,576,476	-		Pf6N2E2_2170	0.83	+0.7
2,576,627	-				+0.6
2,576,627	-				-0.8
2,576,627	-				+0.1
2,576,627	-				-0.3
2,576,898	-		Pf6N2E2_2171	0.40	+0.8
2,576,898	-		Pf6N2E2_2171	0.40	-0.1
2,576,925	-		Pf6N2E2_2171	0.46	-0.8
2,576,925	-		Pf6N2E2_2171	0.46	-0.0
2,576,980	+		Pf6N2E2_2171	0.59	+0.5
2,576,996	+		Pf6N2E2_2171	0.62	-1.3
2,576,997	-		Pf6N2E2_2171	0.63	+0.5
2,576,997	-		Pf6N2E2_2171	0.63	+1.3
2,577,014	-		Pf6N2E2_2171	0.66	+0.0
2,577,014	-		Pf6N2E2_2171	0.66	+0.5
2,577,167	+				-1.2
2,577,167	+				-0.9
2,577,168	-				-0.4
2,577,177	+				+0.2
2,577,177	+				+0.4
2,577,177	+				-0.4
2,577,177	+				+1.0
2,577,178	-				-0.5
2,577,178	-				-0.2
2,577,181	+				-0.2
2,577,181	+				+0.8
2,577,181	+				-0.3
2,577,182	-				+1.1
2,577,182	-				-0.1
2,577,199	+				-0.6
2,577,199	+				+0.0
2,577,200	-				+1.3
2,577,298	-				+0.6
2,577,379	-		Pf6N2E2_2172	0.12	-0.1
2,577,440	-		Pf6N2E2_2172	0.19	+0.5
2,577,440	-		Pf6N2E2_2172	0.19	+0.4
2,577,601	+		Pf6N2E2_2172	0.35	+0.9
2,577,601	+		Pf6N2E2_2172	0.35	+0.9
2,577,695	-		Pf6N2E2_2172	0.45	+0.7
2,577,711	+		Pf6N2E2_2172	0.47	-1.6
2,577,711	+		Pf6N2E2_2172	0.47	+0.2
2,577,712	-		Pf6N2E2_2172	0.47	+0.0
2,577,712	-		Pf6N2E2_2172	0.47	-0.4
2,577,712	-		Pf6N2E2_2172	0.47	+0.7
2,577,712	-		Pf6N2E2_2172	0.47	+0.6
2,577,792	+		Pf6N2E2_2172	0.55	+0.4
2,577,792	+		Pf6N2E2_2172	0.55	+0.8
2,577,793	-		Pf6N2E2_2172	0.55	+0.4
2,577,848	+		Pf6N2E2_2172	0.61	+0.4
2,577,848	+		Pf6N2E2_2172	0.61	+0.1
2,577,848	+		Pf6N2E2_2172	0.61	+1.5
2,577,849	-		Pf6N2E2_2172	0.61	-0.3
2,578,151	+				-0.6
2,578,404	+				+0.4
2,578,404	+				+0.4
2,578,404	+				+0.1
2,578,404	+				+1.4
2,578,404	+				+1.0
2,578,404	+				-0.6
2,578,404	+				-1.3
2,578,404	+				+1.1
2,578,404	+				+0.7
2,578,404	+				+0.6
2,578,404	+				+0.4
2,578,404	+				+0.9
2,578,404	+				-0.1
2,578,404	+				-1.0
2,578,405	-				-0.9
2,578,405	-				+0.5
2,578,405	-				-0.4
2,578,405	-				+0.4
2,578,405	-				+0.4
2,578,405	-				-0.5
2,578,405	-				-0.1
2,578,408	+				+0.9
2,578,408	+				+0.4
2,578,409	-				-0.3
2,578,518	+		Pf6N2E2_2173	0.18	-0.7
2,578,518	+		Pf6N2E2_2173	0.18	+0.5
2,578,518	+		Pf6N2E2_2173	0.18	+1.0
2,578,519	-		Pf6N2E2_2173	0.18	-0.8
2,578,519	-		Pf6N2E2_2173	0.18	+1.4
2,578,519	-		Pf6N2E2_2173	0.18	+0.6
2,578,519	-		Pf6N2E2_2173	0.18	-0.2
2,578,519	-		Pf6N2E2_2173	0.18	-0.9
2,578,519	-		Pf6N2E2_2173	0.18	-0.5
2,578,519	-		Pf6N2E2_2173	0.18	-0.1
2,578,530	+		Pf6N2E2_2173	0.19	-0.3
2,578,530	+		Pf6N2E2_2173	0.19	-0.9
2,578,530	+		Pf6N2E2_2173	0.19	+0.1
2,578,531	-		Pf6N2E2_2173	0.19	-0.7
2,578,531	-		Pf6N2E2_2173	0.19	-0.1
2,578,531	-		Pf6N2E2_2173	0.19	+0.7
2,578,531	-		Pf6N2E2_2173	0.19	+0.2
2,578,531	-		Pf6N2E2_2173	0.19	-0.2
2,578,531	-		Pf6N2E2_2173	0.19	+0.5
2,578,681	+		Pf6N2E2_2173	0.39	+0.4
2,578,681	+		Pf6N2E2_2173	0.39	-3.7
2,578,682	-		Pf6N2E2_2173	0.39	-1.9
2,578,783	+		Pf6N2E2_2173	0.53	+1.2
2,578,791	+		Pf6N2E2_2173	0.54	-0.9
2,578,791	+		Pf6N2E2_2173	0.54	-0.1
2,578,791	+		Pf6N2E2_2173	0.54	+0.1
2,578,791	+		Pf6N2E2_2173	0.54	+0.1
2,578,792	-		Pf6N2E2_2173	0.54	-0.1
2,578,792	-		Pf6N2E2_2173	0.54	-1.6
2,578,911	+		Pf6N2E2_2173	0.70	+0.0
2,578,911	+		Pf6N2E2_2173	0.70	-0.1
2,578,911	+		Pf6N2E2_2173	0.70	+0.4
2,578,912	-		Pf6N2E2_2173	0.70	-0.2
2,578,912	-		Pf6N2E2_2173	0.70	-0.0
2,578,945	-		Pf6N2E2_2173	0.74	+0.4
2,578,963	-		Pf6N2E2_2173	0.76	+0.0
2,578,963	-		Pf6N2E2_2173	0.76	+1.3
2,578,980	+		Pf6N2E2_2173	0.79	-0.2
2,578,981	-		Pf6N2E2_2173	0.79	+0.9
2,578,981	-		Pf6N2E2_2173	0.79	+1.1