Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2009

Experiment: Chloramphenicol 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.008 mg/ml
2,391,115	-				+0.4
2,391,172	-				-0.0
2,391,172	-				-0.8
2,391,172	-				+0.5
2,391,318	-				+0.6
2,391,323	+				-1.9
2,391,323	+				+0.8
2,391,324	-				+1.2
2,391,324	-				-0.1
2,391,324	-				+0.1
2,391,324	-				-0.0
2,391,324	-				-1.3
2,391,324	-				-0.7
2,391,324	-				-0.3
2,391,389	-				-1.7
2,391,444	-				+0.1
2,391,459	+				-0.1
2,391,535	-				+0.2
2,391,565	+				+0.3
2,391,566	-				+1.6
2,391,566	-				+0.6
2,391,566	-				+0.4
2,391,566	-				+0.3
2,391,568	-				+0.9
2,391,614	-				-0.3
2,391,614	-				-0.1
2,391,621	+				+0.2
2,391,621	+				-0.6
2,391,622	-				-0.1
2,391,622	-				-0.1
2,391,629	+				-0.1
2,391,630	-				-0.1
2,391,630	-				+0.1
2,391,632	+				-1.2
2,391,632	+				+0.3
2,391,733	+				+1.7
2,391,748	+				-1.6
2,391,749	-				+0.3
2,391,749	-				+0.4
2,391,857	+				+0.6
2,391,857	+				+0.3
2,391,857	+				-1.3
2,391,858	-				-0.6
2,391,933	-				+0.3
2,391,933	-				-1.2
2,391,933	-				+0.1
2,391,933	-				+0.3
2,391,933	-				-1.7
2,391,935	-				-0.3
2,391,935	-				+0.3
2,391,935	-				+0.1
2,391,935	-				+0.5
2,391,944	-				-0.2
2,391,959	-				+0.5
2,392,138	+				+0.2
2,392,145	+		Pf6N2E2_2009	0.11	+0.2
2,392,145	+		Pf6N2E2_2009	0.11	+0.6
2,392,145	+		Pf6N2E2_2009	0.11	+0.1
2,392,145	+		Pf6N2E2_2009	0.11	-0.5
2,392,146	-		Pf6N2E2_2009	0.11	-0.4
2,392,146	-		Pf6N2E2_2009	0.11	-0.3
2,392,146	-		Pf6N2E2_2009	0.11	+8.8
2,392,202	+		Pf6N2E2_2009	0.20	-0.6
2,392,202	+		Pf6N2E2_2009	0.20	+0.4
2,392,258	+		Pf6N2E2_2009	0.29	+1.1
2,392,258	+		Pf6N2E2_2009	0.29	+0.2
2,392,259	-		Pf6N2E2_2009	0.29	-0.0
2,392,259	-		Pf6N2E2_2009	0.29	-1.5
2,392,259	-		Pf6N2E2_2009	0.29	+1.2
2,392,259	-		Pf6N2E2_2009	0.29	-0.6
2,392,259	-		Pf6N2E2_2009	0.29	-0.3
2,392,259	-		Pf6N2E2_2009	0.29	+0.9
2,392,390	-		Pf6N2E2_2009	0.51	-0.3
2,392,524	+		Pf6N2E2_2009	0.72	-0.7
2,392,524	+		Pf6N2E2_2009	0.72	-2.3
2,392,524	+		Pf6N2E2_2009	0.72	+0.6
2,392,525	-		Pf6N2E2_2009	0.72	+0.5
2,392,525	-		Pf6N2E2_2009	0.72	-0.2
2,392,525	-		Pf6N2E2_2009	0.72	+0.1
2,392,532	+		Pf6N2E2_2009	0.74	+0.8
2,392,532	+		Pf6N2E2_2009	0.74	+0.0
2,392,540	+		Pf6N2E2_2009	0.75	+1.0
2,392,540	+		Pf6N2E2_2009	0.75	-0.1
2,392,540	+		Pf6N2E2_2009	0.75	+1.1
2,392,541	-		Pf6N2E2_2009	0.75	-0.1
2,392,541	-		Pf6N2E2_2009	0.75	+0.4
2,392,541	-		Pf6N2E2_2009	0.75	-2.1
2,392,541	-		Pf6N2E2_2009	0.75	+0.5
2,392,541	-		Pf6N2E2_2009	0.75	-0.4
2,392,541	-		Pf6N2E2_2009	0.75	+0.4
2,392,541	-		Pf6N2E2_2009	0.75	-0.2
2,392,541	-		Pf6N2E2_2009	0.75	-0.8
2,392,630	+		Pf6N2E2_2009	0.89	-0.3
2,392,631	-		Pf6N2E2_2009	0.90	+0.9
2,392,690	+				-0.3
2,392,690	+				+1.2
2,392,691	-				+1.0
2,392,691	-				+0.8
2,392,691	-				+0.3
2,392,691	-				-0.2
2,392,691	-				-0.3
2,392,691	-				+0.8
2,392,697	+				+0.9
2,392,698	-				-0.6
2,392,778	+				-0.7
2,392,846	+		Pf6N2E2_2010	0.14	-1.6
2,393,089	+		Pf6N2E2_2010	0.62	-2.1
2,393,211	+		Pf6N2E2_2010	0.87	-2.1
2,393,274	-				-1.4
2,393,437	+				-1.1
2,393,518	-				+0.4
2,393,527	+				-0.4
2,393,528	-				-0.1
2,393,528	-				-0.5
2,393,610	+				+0.2
2,393,685	+				+0.1
2,393,685	+				-0.1
2,393,686	-				+0.5
2,393,686	-				+0.6