Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2168 and Ga0059261_2169 are separated by 290 nucleotides Ga0059261_2169 and Ga0059261_2170 are separated by 192 nucleotides Ga0059261_2170 and Ga0059261_2171 overlap by 4 nucleotides Ga0059261_2171 and Ga0059261_2172 are separated by 1 nucleotides
Ga0059261_2168: Ga0059261_2168 - Uncharacterized protein conserved in bacteria, at 2,279,578 to 2,280,042
_2168
Ga0059261_2169: Ga0059261_2169 - tRNA, at 2,280,333 to 2,280,407
_2169
Ga0059261_2170: Ga0059261_2170 - Thioredoxin domain-containing protein, at 2,280,600 to 2,281,511
_2170
Ga0059261_2171: Ga0059261_2171 - Uncharacterized protein, similar to the N-terminal domain of Lon protease, at 2,281,508 to 2,282,131
_2171
Ga0059261_2172: Ga0059261_2172 - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 2,282,133 to 2,283,350
_2172
Position (kb)
2280
2281
2282 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2279.613 kb on + strand at 2279.613 kb on + strand at 2279.613 kb on + strand at 2279.613 kb on + strand at 2279.613 kb on + strand at 2279.613 kb on + strand at 2279.613 kb on + strand at 2279.614 kb on - strand at 2279.614 kb on - strand at 2279.614 kb on - strand at 2279.667 kb on + strand, within Ga0059261_2168 at 2279.668 kb on - strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.715 kb on + strand, within Ga0059261_2168 at 2279.716 kb on - strand, within Ga0059261_2168 at 2279.716 kb on - strand, within Ga0059261_2168 at 2279.716 kb on - strand, within Ga0059261_2168 at 2279.716 kb on - strand, within Ga0059261_2168 at 2279.716 kb on - strand, within Ga0059261_2168 at 2279.716 kb on - strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.717 kb on + strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2279.718 kb on - strand, within Ga0059261_2168 at 2280.057 kb on + strand at 2280.057 kb on + strand at 2280.057 kb on + strand at 2280.057 kb on + strand at 2280.058 kb on - strand at 2280.058 kb on - strand at 2280.058 kb on - strand at 2280.058 kb on - strand at 2280.058 kb on - strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.097 kb on + strand at 2280.098 kb on - strand at 2280.098 kb on - strand at 2280.098 kb on - strand at 2280.136 kb on + strand at 2280.136 kb on + strand at 2280.137 kb on - strand at 2280.289 kb on + strand at 2280.289 kb on + strand at 2280.289 kb on + strand at 2280.289 kb on + strand at 2280.289 kb on + strand at 2280.290 kb on - strand at 2280.290 kb on - strand at 2280.290 kb on - strand at 2280.290 kb on - strand at 2280.290 kb on - strand at 2280.290 kb on - strand at 2280.290 kb on - strand at 2280.303 kb on + strand at 2280.304 kb on - strand at 2280.520 kb on + strand at 2280.520 kb on + strand at 2280.520 kb on + strand at 2280.521 kb on - strand at 2280.521 kb on - strand at 2280.521 kb on - strand at 2280.567 kb on + strand at 2280.567 kb on + strand at 2280.567 kb on + strand at 2280.567 kb on + strand at 2280.567 kb on + strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.568 kb on - strand at 2280.766 kb on - strand, within Ga0059261_2170 at 2280.766 kb on - strand, within Ga0059261_2170 at 2280.766 kb on - strand, within Ga0059261_2170 at 2280.858 kb on + strand, within Ga0059261_2170 at 2280.858 kb on + strand, within Ga0059261_2170 at 2280.858 kb on + strand, within Ga0059261_2170 at 2280.858 kb on + strand, within Ga0059261_2170 at 2280.858 kb on + strand, within Ga0059261_2170 at 2280.858 kb on + strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2280.859 kb on - strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.021 kb on + strand, within Ga0059261_2170 at 2281.022 kb on - strand, within Ga0059261_2170 at 2281.022 kb on - strand, within Ga0059261_2170 at 2281.022 kb on - strand, within Ga0059261_2170 at 2281.059 kb on + strand, within Ga0059261_2170 at 2281.059 kb on + strand, within Ga0059261_2170 at 2281.059 kb on + strand, within Ga0059261_2170 at 2281.059 kb on + strand, within Ga0059261_2170 at 2281.059 kb on + strand, within Ga0059261_2170 at 2281.059 kb on + strand at 2281.059 kb on + strand, within Ga0059261_2170 at 2281.060 kb on - strand, within Ga0059261_2170 at 2281.060 kb on - strand, within Ga0059261_2170 at 2281.060 kb on - strand, within Ga0059261_2170 at 2281.060 kb on - strand, within Ga0059261_2170 at 2281.060 kb on - strand, within Ga0059261_2170 at 2281.312 kb on - strand, within Ga0059261_2170 at 2281.312 kb on - strand, within Ga0059261_2170 at 2281.312 kb on - strand, within Ga0059261_2170 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.582 kb on + strand, within Ga0059261_2171 at 2281.583 kb on - strand, within Ga0059261_2171 at 2281.583 kb on - strand, within Ga0059261_2171 at 2281.583 kb on - strand, within Ga0059261_2171 at 2281.583 kb on - strand, within Ga0059261_2171 at 2281.583 kb on - strand, within Ga0059261_2171 at 2281.599 kb on - strand, within Ga0059261_2171 at 2281.934 kb on + strand, within Ga0059261_2171 at 2281.934 kb on + strand, within Ga0059261_2171 at 2281.934 kb on + strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2281.935 kb on - strand, within Ga0059261_2171 at 2282.129 kb on + strand at 2282.129 kb on + strand at 2282.129 kb on + strand at 2282.129 kb on + strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.130 kb on - strand at 2282.134 kb on + strand at 2282.134 kb on + strand at 2282.134 kb on + strand at 2282.135 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 2,279,613 + -0.8 2,279,613 + +0.0 2,279,613 + -1.8 2,279,613 + +0.1 2,279,613 + +0.8 2,279,613 + -0.8 2,279,613 + +0.5 2,279,614 - +0.6 2,279,614 - +0.2 2,279,614 - -0.9 2,279,667 + Ga0059261_2168 0.19 -0.3 2,279,668 - Ga0059261_2168 0.19 +0.0 2,279,715 + Ga0059261_2168 0.29 -0.1 2,279,715 + Ga0059261_2168 0.29 +0.5 2,279,715 + Ga0059261_2168 0.29 -0.4 2,279,715 + Ga0059261_2168 0.29 +0.4 2,279,715 + Ga0059261_2168 0.29 +0.2 2,279,715 + Ga0059261_2168 0.29 -0.3 2,279,715 + Ga0059261_2168 0.29 +1.0 2,279,715 + Ga0059261_2168 0.29 -1.3 2,279,716 - Ga0059261_2168 0.30 -0.2 2,279,716 - Ga0059261_2168 0.30 +0.1 2,279,716 - Ga0059261_2168 0.30 -0.6 2,279,716 - Ga0059261_2168 0.30 -0.3 2,279,716 - Ga0059261_2168 0.30 -0.1 2,279,716 - Ga0059261_2168 0.30 -2.5 2,279,717 + Ga0059261_2168 0.30 +0.4 2,279,717 + Ga0059261_2168 0.30 -0.3 2,279,717 + Ga0059261_2168 0.30 -0.9 2,279,717 + Ga0059261_2168 0.30 -1.5 2,279,717 + Ga0059261_2168 0.30 +0.1 2,279,717 + Ga0059261_2168 0.30 -0.0 2,279,717 + Ga0059261_2168 0.30 +0.4 2,279,718 - Ga0059261_2168 0.30 -0.8 2,279,718 - Ga0059261_2168 0.30 -0.5 2,279,718 - Ga0059261_2168 0.30 +0.6 2,279,718 - Ga0059261_2168 0.30 -0.1 2,279,718 - Ga0059261_2168 0.30 +0.3 2,279,718 - Ga0059261_2168 0.30 -1.7 2,279,718 - Ga0059261_2168 0.30 -1.1 2,279,718 - Ga0059261_2168 0.30 -1.0 2,279,718 - Ga0059261_2168 0.30 -0.2 2,279,718 - Ga0059261_2168 0.30 -0.7 2,279,718 - Ga0059261_2168 0.30 -0.4 2,279,718 - Ga0059261_2168 0.30 +0.4 2,279,718 - Ga0059261_2168 0.30 +0.6 2,280,057 + +0.3 2,280,057 + -0.7 2,280,057 + -0.3 2,280,057 + -0.2 2,280,058 - +0.4 2,280,058 - +0.9 2,280,058 - -0.0 2,280,058 - +0.2 2,280,058 - +0.6 2,280,097 + +1.1 2,280,097 + +0.2 2,280,097 + -0.2 2,280,097 + -0.1 2,280,097 + -0.5 2,280,097 + -0.6 2,280,097 + +0.1 2,280,097 + +0.3 2,280,098 - +0.2 2,280,098 - +0.3 2,280,098 - +0.3 2,280,136 + -0.8 2,280,136 + +0.5 2,280,137 - -0.9 2,280,289 + -0.1 2,280,289 + +0.1 2,280,289 + +0.3 2,280,289 + -0.6 2,280,289 + +0.1 2,280,290 - +0.4 2,280,290 - +0.2 2,280,290 - -0.4 2,280,290 - +0.3 2,280,290 - +0.4 2,280,290 - -0.1 2,280,290 - -0.7 2,280,303 + +0.6 2,280,304 - -0.0 2,280,520 + +0.1 2,280,520 + +0.4 2,280,520 + +0.6 2,280,521 - +0.2 2,280,521 - +1.3 2,280,521 - -0.3 2,280,567 + -0.0 2,280,567 + -0.5 2,280,567 + +0.1 2,280,567 + -0.3 2,280,567 + -0.1 2,280,568 - -0.0 2,280,568 - +0.7 2,280,568 - +0.2 2,280,568 - +1.9 2,280,568 - +0.2 2,280,568 - +0.4 2,280,568 - -1.8 2,280,568 - -0.6 2,280,568 - +0.3 2,280,568 - -0.1 2,280,766 - Ga0059261_2170 0.18 -0.7 2,280,766 - Ga0059261_2170 0.18 -0.2 2,280,766 - Ga0059261_2170 0.18 +0.2 2,280,858 + Ga0059261_2170 0.28 +0.8 2,280,858 + Ga0059261_2170 0.28 +0.5 2,280,858 + Ga0059261_2170 0.28 +1.1 2,280,858 + Ga0059261_2170 0.28 +0.2 2,280,858 + Ga0059261_2170 0.28 +0.7 2,280,858 + Ga0059261_2170 0.28 +0.0 2,280,859 - Ga0059261_2170 0.28 +0.3 2,280,859 - Ga0059261_2170 0.28 +0.7 2,280,859 - Ga0059261_2170 0.28 +0.6 2,280,859 - Ga0059261_2170 0.28 +0.7 2,280,859 - Ga0059261_2170 0.28 +0.5 2,280,859 - Ga0059261_2170 0.28 +0.1 2,280,859 - Ga0059261_2170 0.28 +0.3 2,280,859 - Ga0059261_2170 0.28 -0.0 2,280,859 - Ga0059261_2170 0.28 +1.5 2,281,021 + Ga0059261_2170 0.46 +0.7 2,281,021 + Ga0059261_2170 0.46 -0.1 2,281,021 + Ga0059261_2170 0.46 +0.7 2,281,021 + Ga0059261_2170 0.46 +0.4 2,281,021 + Ga0059261_2170 0.46 +0.9 2,281,021 + Ga0059261_2170 0.46 +1.4 2,281,021 + Ga0059261_2170 0.46 +0.7 2,281,022 - Ga0059261_2170 0.46 +0.7 2,281,022 - Ga0059261_2170 0.46 +0.4 2,281,022 - Ga0059261_2170 0.46 +0.4 2,281,059 + Ga0059261_2170 0.50 +0.4 2,281,059 + Ga0059261_2170 0.50 -0.7 2,281,059 + Ga0059261_2170 0.50 +0.4 2,281,059 + Ga0059261_2170 0.50 +0.4 2,281,059 + Ga0059261_2170 0.50 +0.6 2,281,059 + +1.7 2,281,059 + Ga0059261_2170 0.50 -0.7 2,281,060 - Ga0059261_2170 0.50 +0.7 2,281,060 - Ga0059261_2170 0.50 -0.1 2,281,060 - Ga0059261_2170 0.50 +0.3 2,281,060 - Ga0059261_2170 0.50 +0.8 2,281,060 - Ga0059261_2170 0.50 +0.4 2,281,312 - Ga0059261_2170 0.78 +0.6 2,281,312 - Ga0059261_2170 0.78 +1.3 2,281,312 - Ga0059261_2170 0.78 +0.4 2,281,582 + Ga0059261_2171 0.12 +0.4 2,281,582 + Ga0059261_2171 0.12 +0.8 2,281,582 + Ga0059261_2171 0.12 -0.1 2,281,582 + Ga0059261_2171 0.12 +0.0 2,281,582 + Ga0059261_2171 0.12 +1.2 2,281,582 + Ga0059261_2171 0.12 +0.3 2,281,582 + Ga0059261_2171 0.12 -0.3 2,281,582 + Ga0059261_2171 0.12 +1.0 2,281,582 + Ga0059261_2171 0.12 -0.3 2,281,583 - Ga0059261_2171 0.12 +1.0 2,281,583 - Ga0059261_2171 0.12 +0.9 2,281,583 - Ga0059261_2171 0.12 +0.5 2,281,583 - Ga0059261_2171 0.12 +0.6 2,281,583 - Ga0059261_2171 0.12 +0.5 2,281,599 - Ga0059261_2171 0.15 -0.2 2,281,934 + Ga0059261_2171 0.68 +0.4 2,281,934 + Ga0059261_2171 0.68 +0.3 2,281,934 + Ga0059261_2171 0.68 -0.6 2,281,935 - Ga0059261_2171 0.68 +0.4 2,281,935 - Ga0059261_2171 0.68 +0.3 2,281,935 - Ga0059261_2171 0.68 -0.4 2,281,935 - Ga0059261_2171 0.68 +0.0 2,281,935 - Ga0059261_2171 0.68 +0.7 2,281,935 - Ga0059261_2171 0.68 +0.4 2,281,935 - Ga0059261_2171 0.68 -0.1 2,281,935 - Ga0059261_2171 0.68 +0.6 2,281,935 - Ga0059261_2171 0.68 -0.3 2,282,129 + +0.3 2,282,129 + -0.6 2,282,129 + -0.4 2,282,129 + -0.3 2,282,130 - -0.9 2,282,130 - -0.4 2,282,130 - +1.8 2,282,130 - +0.1 2,282,130 - +1.5 2,282,130 - -0.5 2,282,130 - -0.2 2,282,130 - -0.1 2,282,134 + -0.1 2,282,134 + -0.2 2,282,134 + -0.4 2,282,135 - +0.2
Or see this region's nucleotide sequence