Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1483 and Ga0059261_1484 are separated by 76 nucleotides Ga0059261_1484 and Ga0059261_1485 overlap by 8 nucleotides Ga0059261_1485 and Ga0059261_1486 are separated by 0 nucleotides
Ga0059261_1483: Ga0059261_1483 - acetyl-CoA acetyltransferases, at 1,566,785 to 1,567,972
_1483
Ga0059261_1484: Ga0059261_1484 - hypothetical protein, at 1,568,049 to 1,568,300
_1484
Ga0059261_1485: Ga0059261_1485 - Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, at 1,568,293 to 1,569,039
_1485
Ga0059261_1486: Ga0059261_1486 - NAD-dependent aldehyde dehydrogenases, at 1,569,040 to 1,570,446
_1486
Position (kb)
1568
1569 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1567.461 kb on + strand, within Ga0059261_1483 at 1567.462 kb on - strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.512 kb on + strand, within Ga0059261_1483 at 1567.513 kb on - strand, within Ga0059261_1483 at 1567.513 kb on - strand, within Ga0059261_1483 at 1567.513 kb on - strand, within Ga0059261_1483 at 1567.513 kb on - strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.540 kb on + strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.541 kb on - strand at 1567.541 kb on - strand, within Ga0059261_1483 at 1567.600 kb on - strand, within Ga0059261_1483 at 1567.600 kb on - strand, within Ga0059261_1483 at 1567.600 kb on - strand, within Ga0059261_1483 at 1567.600 kb on - strand, within Ga0059261_1483 at 1567.600 kb on - strand, within Ga0059261_1483 at 1567.600 kb on - strand, within Ga0059261_1483 at 1567.810 kb on + strand, within Ga0059261_1483 at 1567.810 kb on + strand, within Ga0059261_1483 at 1567.811 kb on - strand, within Ga0059261_1483 at 1567.811 kb on - strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.812 kb on + strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.813 kb on - strand, within Ga0059261_1483 at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.941 kb on + strand at 1567.942 kb on - strand at 1567.942 kb on - strand at 1567.942 kb on - strand at 1567.942 kb on - strand at 1567.942 kb on - strand at 1567.942 kb on - strand at 1567.942 kb on - strand at 1567.946 kb on + strand at 1567.946 kb on + strand at 1567.946 kb on + strand at 1567.946 kb on + strand at 1567.946 kb on + strand at 1567.946 kb on + strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1567.947 kb on - strand at 1568.010 kb on + strand at 1568.011 kb on - strand at 1568.019 kb on + strand at 1568.265 kb on + strand, within Ga0059261_1484 at 1568.265 kb on + strand, within Ga0059261_1484 at 1568.265 kb on + strand, within Ga0059261_1484 at 1568.265 kb on + strand, within Ga0059261_1484 at 1568.266 kb on - strand, within Ga0059261_1484 at 1568.266 kb on - strand, within Ga0059261_1484 at 1568.272 kb on - strand, within Ga0059261_1484 at 1568.470 kb on + strand, within Ga0059261_1485 at 1568.470 kb on + strand, within Ga0059261_1485 at 1568.470 kb on + strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.471 kb on - strand, within Ga0059261_1485 at 1568.794 kb on + strand, within Ga0059261_1485 at 1568.794 kb on + strand, within Ga0059261_1485 at 1568.795 kb on - strand, within Ga0059261_1485 at 1568.796 kb on - strand, within Ga0059261_1485 at 1569.022 kb on + strand at 1569.022 kb on + strand at 1569.022 kb on + strand at 1569.023 kb on - strand at 1569.023 kb on - strand at 1569.023 kb on - strand at 1569.023 kb on - strand at 1569.037 kb on + strand at 1569.037 kb on + strand at 1569.037 kb on + strand at 1569.037 kb on + strand at 1569.037 kb on + strand at 1569.037 kb on + strand at 1569.037 kb on + strand at 1569.038 kb on - strand at 1569.038 kb on - strand at 1569.038 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,567,461 + Ga0059261_1483 0.57 +1.6 1,567,462 - Ga0059261_1483 0.57 -1.3 1,567,512 + Ga0059261_1483 0.61 +0.9 1,567,512 + Ga0059261_1483 0.61 +0.9 1,567,512 + Ga0059261_1483 0.61 +0.5 1,567,512 + Ga0059261_1483 0.61 +0.9 1,567,512 + Ga0059261_1483 0.61 +0.5 1,567,512 + Ga0059261_1483 0.61 +0.2 1,567,512 + Ga0059261_1483 0.61 +1.2 1,567,512 + Ga0059261_1483 0.61 +0.8 1,567,512 + Ga0059261_1483 0.61 -0.0 1,567,513 - Ga0059261_1483 0.61 +0.9 1,567,513 - Ga0059261_1483 0.61 +0.7 1,567,513 - Ga0059261_1483 0.61 +1.0 1,567,513 - Ga0059261_1483 0.61 +0.5 1,567,540 + Ga0059261_1483 0.64 +0.0 1,567,540 + Ga0059261_1483 0.64 -0.2 1,567,540 + Ga0059261_1483 0.64 +0.9 1,567,540 + Ga0059261_1483 0.64 +1.0 1,567,540 + Ga0059261_1483 0.64 +0.3 1,567,540 + Ga0059261_1483 0.64 -0.6 1,567,540 + Ga0059261_1483 0.64 -0.5 1,567,540 + Ga0059261_1483 0.64 +0.6 1,567,541 - Ga0059261_1483 0.64 -0.5 1,567,541 - Ga0059261_1483 0.64 +0.5 1,567,541 - Ga0059261_1483 0.64 +0.4 1,567,541 - Ga0059261_1483 0.64 +1.0 1,567,541 - Ga0059261_1483 0.64 +0.3 1,567,541 - Ga0059261_1483 0.64 +0.5 1,567,541 - -0.7 1,567,541 - Ga0059261_1483 0.64 +0.5 1,567,541 - Ga0059261_1483 0.64 -0.8 1,567,541 - Ga0059261_1483 0.64 +0.6 1,567,541 - +2.2 1,567,541 - Ga0059261_1483 0.64 +1.3 1,567,600 - Ga0059261_1483 0.69 -0.1 1,567,600 - Ga0059261_1483 0.69 +0.4 1,567,600 - Ga0059261_1483 0.69 +0.1 1,567,600 - Ga0059261_1483 0.69 +0.0 1,567,600 - Ga0059261_1483 0.69 +0.3 1,567,600 - Ga0059261_1483 0.69 -0.6 1,567,810 + Ga0059261_1483 0.86 +0.9 1,567,810 + Ga0059261_1483 0.86 -0.2 1,567,811 - Ga0059261_1483 0.86 -0.1 1,567,811 - Ga0059261_1483 0.86 +0.6 1,567,812 + Ga0059261_1483 0.86 +0.0 1,567,812 + Ga0059261_1483 0.86 +0.7 1,567,812 + Ga0059261_1483 0.86 +0.2 1,567,812 + Ga0059261_1483 0.86 +0.6 1,567,812 + Ga0059261_1483 0.86 +0.3 1,567,812 + Ga0059261_1483 0.86 -0.5 1,567,812 + Ga0059261_1483 0.86 +0.3 1,567,812 + Ga0059261_1483 0.86 +0.8 1,567,812 + Ga0059261_1483 0.86 +0.4 1,567,812 + Ga0059261_1483 0.86 +0.4 1,567,812 + Ga0059261_1483 0.86 +0.9 1,567,812 + Ga0059261_1483 0.86 -0.1 1,567,812 + Ga0059261_1483 0.86 +0.2 1,567,813 - Ga0059261_1483 0.87 +1.2 1,567,813 - Ga0059261_1483 0.87 +0.8 1,567,813 - Ga0059261_1483 0.87 +0.3 1,567,813 - Ga0059261_1483 0.87 +0.2 1,567,813 - Ga0059261_1483 0.87 +0.6 1,567,813 - Ga0059261_1483 0.87 +0.2 1,567,813 - Ga0059261_1483 0.87 +0.1 1,567,813 - Ga0059261_1483 0.87 +0.7 1,567,813 - Ga0059261_1483 0.87 -0.9 1,567,813 - Ga0059261_1483 0.87 +0.8 1,567,813 - Ga0059261_1483 0.87 +0.9 1,567,813 - Ga0059261_1483 0.87 +0.5 1,567,813 - Ga0059261_1483 0.87 +0.3 1,567,813 - Ga0059261_1483 0.87 +0.0 1,567,813 - Ga0059261_1483 0.87 -0.3 1,567,813 - Ga0059261_1483 0.87 -1.4 1,567,941 + +0.5 1,567,941 + -0.9 1,567,941 + +0.1 1,567,941 + +0.3 1,567,941 + -0.5 1,567,941 + -0.2 1,567,941 + -0.2 1,567,941 + +0.7 1,567,941 + -0.1 1,567,941 + -0.6 1,567,941 + +2.1 1,567,941 + +0.1 1,567,941 + +0.4 1,567,942 - +0.9 1,567,942 - -0.4 1,567,942 - +0.2 1,567,942 - +0.3 1,567,942 - +0.5 1,567,942 - +0.6 1,567,942 - +0.5 1,567,946 + -0.2 1,567,946 + +0.4 1,567,946 + -0.1 1,567,946 + +1.1 1,567,946 + +0.9 1,567,946 + -0.7 1,567,947 - +0.6 1,567,947 - +0.2 1,567,947 - +0.1 1,567,947 - -0.3 1,567,947 - +1.2 1,567,947 - +0.4 1,567,947 - -0.5 1,567,947 - +0.3 1,567,947 - +0.1 1,567,947 - +0.3 1,568,010 + -0.7 1,568,011 - +0.1 1,568,019 + -0.6 1,568,265 + Ga0059261_1484 0.86 -0.2 1,568,265 + Ga0059261_1484 0.86 -1.6 1,568,265 + Ga0059261_1484 0.86 -0.3 1,568,265 + Ga0059261_1484 0.86 -0.3 1,568,266 - Ga0059261_1484 0.86 +0.1 1,568,266 - Ga0059261_1484 0.86 -0.5 1,568,272 - Ga0059261_1484 0.88 +0.2 1,568,470 + Ga0059261_1485 0.24 -0.3 1,568,470 + Ga0059261_1485 0.24 +0.4 1,568,470 + Ga0059261_1485 0.24 +0.4 1,568,471 - Ga0059261_1485 0.24 +0.2 1,568,471 - Ga0059261_1485 0.24 +0.0 1,568,471 - Ga0059261_1485 0.24 +0.8 1,568,471 - Ga0059261_1485 0.24 -0.1 1,568,471 - Ga0059261_1485 0.24 -0.1 1,568,471 - Ga0059261_1485 0.24 -0.2 1,568,471 - Ga0059261_1485 0.24 -0.7 1,568,471 - Ga0059261_1485 0.24 -1.5 1,568,794 + Ga0059261_1485 0.67 +0.5 1,568,794 + Ga0059261_1485 0.67 +0.0 1,568,795 - Ga0059261_1485 0.67 +0.5 1,568,796 - Ga0059261_1485 0.67 +0.0 1,569,022 + -0.7 1,569,022 + +0.1 1,569,022 + +0.6 1,569,023 - +0.3 1,569,023 - -0.5 1,569,023 - -0.4 1,569,023 - +1.9 1,569,037 + +3.2 1,569,037 + -1.1 1,569,037 + -0.7 1,569,037 + -0.4 1,569,037 + +0.3 1,569,037 + +0.0 1,569,037 + +0.4 1,569,038 - +0.3 1,569,038 - -1.6 1,569,038 - -0.1
Or see this region's nucleotide sequence