Experiment: Tetracycline 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_482 and Ac3H11_483 are separated by 55 nucleotides Ac3H11_483 and Ac3H11_484 are separated by 48 nucleotides Ac3H11_484 and Ac3H11_485 are separated by 68 nucleotides Ac3H11_485 and Ac3H11_486 are separated by 30 nucleotides
Ac3H11_482 - RND multidrug efflux transporter; Acriflavin resistance protein, at 178,045 to 181,206
_482
Ac3H11_483 - Thioredoxin, at 181,262 to 181,594
_483
Ac3H11_484 - Molybdopterin biosynthesis protein MoeA, at 181,643 to 183,010
_484
Ac3H11_485 - GCN5-related N-acetyltransferase, at 183,079 to 183,678
_485
Ac3H11_486 - Molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 183,709 to 184,347
_486
Position (kb) 181
182
183
184 Strain fitness (log2 ratio) -2
-1
0
1 at 180.808 kb on + strand, within Ac3H11_482 at 180.951 kb on + strand at 180.951 kb on + strand at 180.951 kb on + strand at 180.952 kb on - strand at 180.952 kb on - strand at 180.952 kb on - strand at 181.059 kb on + strand at 181.059 kb on + strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.204 kb on + strand at 181.204 kb on + strand at 181.205 kb on - strand at 181.205 kb on - strand at 181.223 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.252 kb on + strand at 181.253 kb on - strand at 181.253 kb on - strand at 181.322 kb on + strand, within Ac3H11_483 at 181.587 kb on + strand at 181.594 kb on + strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.827 kb on + strand, within Ac3H11_484 at 181.827 kb on + strand, within Ac3H11_484 at 181.827 kb on + strand, within Ac3H11_484 at 181.828 kb on - strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.932 kb on - strand, within Ac3H11_484 at 181.932 kb on - strand, within Ac3H11_484 at 182.026 kb on + strand, within Ac3H11_484 at 182.029 kb on - strand, within Ac3H11_484 at 182.338 kb on - strand, within Ac3H11_484 at 182.352 kb on + strand, within Ac3H11_484 at 182.352 kb on + strand, within Ac3H11_484 at 182.412 kb on + strand, within Ac3H11_484 at 182.413 kb on - strand, within Ac3H11_484 at 182.418 kb on - strand, within Ac3H11_484 at 182.796 kb on + strand, within Ac3H11_484 at 182.796 kb on + strand, within Ac3H11_484 at 182.797 kb on - strand, within Ac3H11_484 at 182.970 kb on + strand at 182.970 kb on + strand at 182.970 kb on + strand at 182.971 kb on - strand at 182.971 kb on - strand at 183.080 kb on + strand at 183.080 kb on + strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.081 kb on - strand at 183.143 kb on + strand, within Ac3H11_485 at 183.143 kb on + strand, within Ac3H11_485 at 183.143 kb on + strand, within Ac3H11_485 at 183.143 kb on + strand, within Ac3H11_485 at 183.144 kb on - strand, within Ac3H11_485 at 183.209 kb on + strand, within Ac3H11_485 at 183.209 kb on + strand, within Ac3H11_485 at 183.209 kb on + strand, within Ac3H11_485 at 183.210 kb on - strand, within Ac3H11_485 at 183.272 kb on - strand, within Ac3H11_485 at 183.272 kb on - strand, within Ac3H11_485 at 183.272 kb on - strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.488 kb on + strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.489 kb on - strand, within Ac3H11_485 at 183.508 kb on + strand, within Ac3H11_485 at 183.509 kb on - strand, within Ac3H11_485 at 183.521 kb on + strand, within Ac3H11_485 at 183.521 kb on + strand, within Ac3H11_485 at 183.522 kb on - strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.578 kb on + strand, within Ac3H11_485 at 183.579 kb on - strand, within Ac3H11_485 at 183.579 kb on - strand, within Ac3H11_485 at 183.579 kb on - strand, within Ac3H11_485 at 183.928 kb on + strand, within Ac3H11_486
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0001 mg/ml remove 180,808 + Ac3H11_482 0.87 -0.7 180,951 + -0.8 180,951 + +0.3 180,951 + -0.3 180,952 - +0.6 180,952 - +0.2 180,952 - +0.8 181,059 + -0.7 181,059 + -0.2 181,060 - -0.4 181,060 - -0.0 181,060 - -0.5 181,060 - -1.1 181,060 - +0.7 181,105 + -0.2 181,105 + -0.0 181,105 + -0.5 181,105 + +1.3 181,105 + -0.1 181,105 + -0.6 181,105 + +0.6 181,106 - -0.6 181,106 - +0.8 181,106 - -1.8 181,106 - +0.2 181,106 - -0.7 181,106 - -1.4 181,106 - -0.7 181,106 - -0.4 181,106 - -0.3 181,106 - -0.8 181,106 - +0.3 181,106 - -1.0 181,106 - -0.7 181,106 - -0.3 181,106 - +0.3 181,106 - +0.9 181,192 + -0.5 181,192 + -0.4 181,192 + +0.7 181,192 + -0.2 181,192 + -1.3 181,192 + -0.3 181,193 - +0.4 181,193 - -0.3 181,193 - -0.8 181,193 - -0.2 181,193 - +0.2 181,204 + -0.1 181,204 + -0.3 181,205 - +0.2 181,205 - +0.6 181,223 + -0.1 181,249 + +0.1 181,249 + +0.6 181,249 + +0.1 181,249 + +0.0 181,249 + -0.4 181,249 + -1.3 181,249 + +0.5 181,249 + +0.1 181,249 + -0.1 181,250 - -0.1 181,250 - -0.7 181,250 - -0.1 181,250 - -0.7 181,250 - +0.9 181,250 - +0.2 181,250 - -0.7 181,250 - -0.2 181,250 - -0.8 181,250 - +0.8 181,250 - -1.0 181,250 - +0.3 181,250 - -0.8 181,252 + +0.3 181,253 - -0.8 181,253 - -0.8 181,322 + Ac3H11_483 0.18 +0.9 181,587 + -0.6 181,594 + +0.6 181,595 - -0.3 181,595 - -0.1 181,595 - +0.6 181,595 - +0.4 181,827 + Ac3H11_484 0.13 -0.2 181,827 + Ac3H11_484 0.13 -0.7 181,827 + Ac3H11_484 0.13 -0.1 181,828 - Ac3H11_484 0.14 +0.8 181,931 + Ac3H11_484 0.21 +0.7 181,931 + Ac3H11_484 0.21 +0.8 181,931 + Ac3H11_484 0.21 +0.4 181,931 + Ac3H11_484 0.21 +0.2 181,932 - Ac3H11_484 0.21 +0.1 181,932 - Ac3H11_484 0.21 +0.7 182,026 + Ac3H11_484 0.28 -0.2 182,029 - Ac3H11_484 0.28 -0.2 182,338 - Ac3H11_484 0.51 +1.6 182,352 + Ac3H11_484 0.52 +1.5 182,352 + Ac3H11_484 0.52 -0.5 182,412 + Ac3H11_484 0.56 -0.9 182,413 - Ac3H11_484 0.56 +1.0 182,418 - Ac3H11_484 0.57 +1.2 182,796 + Ac3H11_484 0.84 -0.5 182,796 + Ac3H11_484 0.84 +0.6 182,797 - Ac3H11_484 0.84 +0.7 182,970 + +0.2 182,970 + -0.0 182,970 + +1.4 182,971 - +0.1 182,971 - +1.3 183,080 + +1.2 183,080 + -0.4 183,081 - +0.7 183,081 - +0.6 183,081 - -0.6 183,081 - -0.8 183,081 - +0.6 183,143 + Ac3H11_485 0.11 -0.1 183,143 + Ac3H11_485 0.11 -1.0 183,143 + Ac3H11_485 0.11 -0.3 183,143 + Ac3H11_485 0.11 -0.5 183,144 - Ac3H11_485 0.11 -0.1 183,209 + Ac3H11_485 0.22 -0.0 183,209 + Ac3H11_485 0.22 -0.6 183,209 + Ac3H11_485 0.22 +0.3 183,210 - Ac3H11_485 0.22 +0.1 183,272 - Ac3H11_485 0.32 -0.1 183,272 - Ac3H11_485 0.32 -0.9 183,272 - Ac3H11_485 0.32 -1.4 183,488 + Ac3H11_485 0.68 +0.2 183,488 + Ac3H11_485 0.68 +0.0 183,488 + Ac3H11_485 0.68 -0.6 183,488 + Ac3H11_485 0.68 -1.5 183,488 + Ac3H11_485 0.68 -1.5 183,488 + Ac3H11_485 0.68 +0.3 183,488 + Ac3H11_485 0.68 -0.4 183,489 - Ac3H11_485 0.68 +0.4 183,489 - Ac3H11_485 0.68 -0.1 183,489 - Ac3H11_485 0.68 -1.2 183,489 - Ac3H11_485 0.68 +0.3 183,489 - Ac3H11_485 0.68 -0.1 183,508 + Ac3H11_485 0.71 -0.3 183,509 - Ac3H11_485 0.72 -0.4 183,521 + Ac3H11_485 0.74 +0.9 183,521 + Ac3H11_485 0.74 -0.4 183,522 - Ac3H11_485 0.74 -0.4 183,578 + Ac3H11_485 0.83 +0.9 183,578 + Ac3H11_485 0.83 +0.2 183,578 + Ac3H11_485 0.83 -0.4 183,578 + Ac3H11_485 0.83 +0.2 183,578 + Ac3H11_485 0.83 +0.1 183,578 + Ac3H11_485 0.83 -0.3 183,578 + Ac3H11_485 0.83 -0.5 183,578 + Ac3H11_485 0.83 +0.6 183,579 - Ac3H11_485 0.83 +0.0 183,579 - Ac3H11_485 0.83 +0.1 183,579 - Ac3H11_485 0.83 -0.2 183,928 + Ac3H11_486 0.34 +0.5
Or see this region's nucleotide sequence