Experiment: Tetracycline 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4738 and Ac3H11_4739 are separated by 164 nucleotides Ac3H11_4739 and Ac3H11_4740 are separated by 106 nucleotides Ac3H11_4740 and Ac3H11_4741 are separated by 62 nucleotides Ac3H11_4741 and Ac3H11_4742 are separated by 68 nucleotides
Ac3H11_4738 - Ferredoxin reductase, at 43,666 to 44,715
_4738
Ac3H11_4739 - FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 44,880 to 45,236
_4739
Ac3H11_4740 - Twin-arginine translocation protein TatA, at 45,343 to 45,585
_4740
Ac3H11_4741 - Twin-arginine translocation protein TatB, at 45,648 to 46,109
_4741
Ac3H11_4742 - Twin-arginine translocation protein TatC, at 46,178 to 46,972
_4742
Position (kb) 44
45
46 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 44.030 kb on - strand, within Ac3H11_4738 at 44.049 kb on + strand, within Ac3H11_4738 at 44.129 kb on + strand, within Ac3H11_4738 at 44.278 kb on + strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.294 kb on - strand, within Ac3H11_4738 at 44.326 kb on + strand, within Ac3H11_4738 at 44.326 kb on + strand, within Ac3H11_4738 at 44.327 kb on - strand, within Ac3H11_4738 at 44.327 kb on - strand, within Ac3H11_4738 at 44.518 kb on + strand, within Ac3H11_4738 at 44.851 kb on - strand at 44.851 kb on - strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.857 kb on + strand at 44.858 kb on - strand at 44.858 kb on - strand at 44.858 kb on - strand at 44.858 kb on - strand at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.943 kb on + strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 44.944 kb on - strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.023 kb on + strand, within Ac3H11_4739 at 45.024 kb on - strand, within Ac3H11_4739 at 45.151 kb on + strand, within Ac3H11_4739 at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand at 45.260 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0001 mg/ml remove 44,030 - Ac3H11_4738 0.35 +0.7 44,049 + Ac3H11_4738 0.36 -2.8 44,129 + Ac3H11_4738 0.44 +0.2 44,278 + Ac3H11_4738 0.58 -0.8 44,294 - Ac3H11_4738 0.60 -0.5 44,294 - Ac3H11_4738 0.60 -0.5 44,294 - Ac3H11_4738 0.60 -1.0 44,326 + Ac3H11_4738 0.63 -0.5 44,326 + Ac3H11_4738 0.63 -0.3 44,327 - Ac3H11_4738 0.63 -0.7 44,327 - Ac3H11_4738 0.63 +0.3 44,518 + Ac3H11_4738 0.81 -1.4 44,851 - +0.2 44,851 - -0.1 44,857 + +0.5 44,857 + -0.4 44,857 + +0.1 44,857 + +0.2 44,857 + -0.0 44,857 + +0.0 44,858 - -1.6 44,858 - -0.2 44,858 - -0.7 44,858 - -0.2 44,943 + Ac3H11_4739 0.18 +0.7 44,943 + Ac3H11_4739 0.18 -0.3 44,943 + Ac3H11_4739 0.18 -0.4 44,943 + Ac3H11_4739 0.18 +0.0 44,943 + Ac3H11_4739 0.18 +1.9 44,943 + Ac3H11_4739 0.18 -0.4 44,943 + Ac3H11_4739 0.18 -0.8 44,943 + Ac3H11_4739 0.18 -0.3 44,943 + Ac3H11_4739 0.18 -0.2 44,944 - Ac3H11_4739 0.18 -1.3 44,944 - Ac3H11_4739 0.18 -0.4 44,944 - Ac3H11_4739 0.18 +0.3 44,944 - Ac3H11_4739 0.18 +0.1 44,944 - Ac3H11_4739 0.18 -1.1 44,944 - Ac3H11_4739 0.18 -0.9 44,944 - Ac3H11_4739 0.18 -0.3 44,944 - Ac3H11_4739 0.18 +0.2 44,944 - Ac3H11_4739 0.18 +0.5 45,023 + Ac3H11_4739 0.40 -0.0 45,023 + Ac3H11_4739 0.40 +0.9 45,023 + Ac3H11_4739 0.40 -0.0 45,023 + Ac3H11_4739 0.40 +0.0 45,023 + Ac3H11_4739 0.40 -1.1 45,024 - Ac3H11_4739 0.40 -1.5 45,151 + Ac3H11_4739 0.76 +0.2 45,260 + -0.2 45,260 + +0.9 45,260 + +0.6 45,260 + -1.1 45,260 + -0.2 45,260 + -0.5
Or see this region's nucleotide sequence