Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2838

Experiment: Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0001 mg/ml
1,144,557	+				-1.4
1,144,557	+				-2.1
1,144,557	+				-1.4
1,144,558	-				-0.8
1,144,584	+				-2.0
1,144,584	+				-2.1
1,144,584	+				-0.5
1,144,584	+				-0.1
1,144,585	-				-2.6
1,144,585	-				-2.1
1,144,585	-				-1.6
1,144,585	-				-0.9
1,144,585	-				+0.8
1,144,728	+				+0.8
1,144,728	+				-1.1
1,144,728	+				-1.4
1,144,728	+				-0.6
1,144,728	+				-2.3
1,144,728	+				+0.6
1,144,728	+				+0.8
1,144,728	+				-0.4
1,144,729	-				-1.1
1,144,729	-				-2.3
1,144,729	-				-1.9
1,144,729	-				-0.2
1,144,729	-				-0.1
1,144,966	+		Ac3H11_2837	0.34	-0.8
1,144,966	+		Ac3H11_2837	0.34	-1.6
1,144,966	+		Ac3H11_2837	0.34	-1.3
1,144,966	+		Ac3H11_2837	0.34	-1.0
1,144,966	+		Ac3H11_2837	0.34	+0.2
1,144,966	+		Ac3H11_2837	0.34	-0.0
1,144,966	+		Ac3H11_2837	0.34	-0.6
1,144,967	-		Ac3H11_2837	0.35	+1.0
1,144,967	-		Ac3H11_2837	0.35	-0.6
1,144,967	-		Ac3H11_2837	0.35	-0.8
1,144,967	-		Ac3H11_2837	0.35	-0.9
1,144,967	-		Ac3H11_2837	0.35	-1.5
1,144,967	-		Ac3H11_2837	0.35	-1.0
1,144,988	-		Ac3H11_2837	0.38	-1.5
1,145,008	+		Ac3H11_2837	0.41	-1.3
1,145,110	+		Ac3H11_2837	0.55	-0.6
1,145,111	-		Ac3H11_2837	0.56	-0.4
1,145,111	-		Ac3H11_2837	0.56	-1.2
1,145,111	-		Ac3H11_2837	0.56	-0.9
1,145,189	-		Ac3H11_2837	0.67	-2.1
1,145,189	-		Ac3H11_2837	0.67	-0.4
1,145,189	-		Ac3H11_2837	0.67	-0.6
1,145,189	-		Ac3H11_2837	0.67	-1.8
1,145,380	+				-0.1
1,145,380	+				-0.6
1,145,380	+				+0.8
1,145,381	-				-0.8
1,145,482	-				-0.4
1,145,510	-				+0.6
1,145,646	-				-0.7
1,145,646	-				-0.7
1,145,646	-				-1.5
1,145,855	+		Ac3H11_2838	0.27	-0.9
1,145,855	+		Ac3H11_2838	0.27	-1.1
1,145,855	+		Ac3H11_2838	0.27	-2.3
1,145,856	-		Ac3H11_2838	0.27	+0.3
1,145,856	-		Ac3H11_2838	0.27	-0.4
1,145,975	+		Ac3H11_2838	0.38	-2.0
1,145,975	+		Ac3H11_2838	0.38	-0.4
1,145,975	+		Ac3H11_2838	0.38	-0.6
1,145,976	-		Ac3H11_2838	0.38	-0.9
1,145,976	-		Ac3H11_2838	0.38	+0.3
1,145,976	-		Ac3H11_2838	0.38	-0.8
1,145,998	+		Ac3H11_2838	0.40	-1.3
1,146,799	+				-1.4
1,147,156	-				-0.2
1,147,169	+				-1.8
1,147,187	+				+0.3
1,147,214	+				-0.2
1,147,214	+				+0.7