Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2759

Experiment: Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0001 mg/ml
1,058,141	-		Ac3H11_2757	0.38	+0.1
1,058,215	+		Ac3H11_2757	0.46	-0.9
1,058,215	+		Ac3H11_2757	0.46	+0.2
1,058,228	+		Ac3H11_2757	0.47	-0.6
1,058,228	+		Ac3H11_2757	0.47	+0.7
1,058,228	+		Ac3H11_2757	0.47	-0.4
1,058,228	+		Ac3H11_2757	0.47	-0.9
1,058,229	-		Ac3H11_2757	0.47	+0.0
1,058,297	+		Ac3H11_2757	0.54	-0.6
1,058,297	+		Ac3H11_2757	0.54	+1.5
1,058,297	+		Ac3H11_2757	0.54	-0.5
1,058,298	-		Ac3H11_2757	0.54	+0.2
1,058,298	-		Ac3H11_2757	0.54	+0.2
1,058,451	-		Ac3H11_2757	0.69	-0.2
1,058,510	+		Ac3H11_2757	0.75	+0.1
1,058,511	-		Ac3H11_2757	0.75	-1.0
1,058,511	-		Ac3H11_2757	0.75	-0.4
1,058,511	-		Ac3H11_2757	0.75	+0.1
1,058,511	-		Ac3H11_2757	0.75	+0.3
1,058,542	+		Ac3H11_2757	0.78	+0.2
1,058,542	+		Ac3H11_2757	0.78	-0.2
1,058,542	+		Ac3H11_2757	0.78	-0.6
1,058,542	+		Ac3H11_2757	0.78	-0.3
1,058,542	+		Ac3H11_2757	0.78	+0.3
1,058,543	-		Ac3H11_2757	0.78	-0.0
1,058,543	-		Ac3H11_2757	0.78	-0.9
1,058,543	-		Ac3H11_2757	0.78	-0.4
1,058,543	-		Ac3H11_2757	0.78	+0.3
1,058,543	-		Ac3H11_2757	0.78	-1.5
1,058,769	+				-1.6
1,058,769	+				+0.1
1,058,769	+				+0.5
1,058,770	-				-0.6
1,058,770	-				-0.1
1,058,922	+		Ac3H11_2758	0.17	+0.9
1,058,922	+		Ac3H11_2758	0.17	+0.5
1,058,922	+		Ac3H11_2758	0.17	+1.9
1,058,923	-		Ac3H11_2758	0.17	-0.3
1,058,923	-		Ac3H11_2758	0.17	-0.5
1,058,923	-		Ac3H11_2758	0.17	+0.1
1,058,923	-		Ac3H11_2758	0.17	-0.6
1,058,923	-		Ac3H11_2758	0.17	+1.0
1,059,042	+		Ac3H11_2758	0.55	-0.7
1,059,042	+		Ac3H11_2758	0.55	-0.3
1,059,043	-		Ac3H11_2758	0.56	+0.3
1,059,043	-		Ac3H11_2758	0.56	-0.5
1,059,043	-		Ac3H11_2758	0.56	+0.6
1,059,084	+		Ac3H11_2758	0.69	+0.0
1,059,084	+		Ac3H11_2758	0.69	+1.0
1,059,084	+		Ac3H11_2758	0.69	+0.5
1,059,084	+		Ac3H11_2758	0.69	+0.5
1,059,085	-		Ac3H11_2758	0.69	+0.6
1,059,085	-		Ac3H11_2758	0.69	+0.4
1,059,085	-		Ac3H11_2758	0.69	+1.3
1,059,085	-		Ac3H11_2758	0.69	+0.8
1,059,085	-		Ac3H11_2758	0.69	-0.3
1,059,122	+		Ac3H11_2758	0.81	+0.1
1,059,123	-		Ac3H11_2758	0.81	-0.3
1,059,123	-		Ac3H11_2758	0.81	-0.3
1,059,169	-				+1.0
1,059,276	+		Ac3H11_2759	0.16	-0.6
1,059,276	+		Ac3H11_2759	0.16	+0.7
1,059,276	+		Ac3H11_2759	0.16	+0.7
1,059,276	+		Ac3H11_2759	0.16	-0.4
1,059,276	+		Ac3H11_2759	0.16	-0.3
1,059,277	-				+1.8
1,059,277	-		Ac3H11_2759	0.16	-0.1
1,059,277	-		Ac3H11_2759	0.16	-0.4
1,059,277	-		Ac3H11_2759	0.16	+0.3
1,059,277	-		Ac3H11_2759	0.16	+0.4
1,059,288	+		Ac3H11_2759	0.17	+0.2
1,059,288	+		Ac3H11_2759	0.17	+0.6
1,059,291	+		Ac3H11_2759	0.17	+0.6
1,059,291	+		Ac3H11_2759	0.17	+0.8
1,059,405	+		Ac3H11_2759	0.30	-0.3
1,059,405	+		Ac3H11_2759	0.30	-0.0
1,059,406	-		Ac3H11_2759	0.30	-0.3
1,059,435	+		Ac3H11_2759	0.34	-0.4
1,059,501	+		Ac3H11_2759	0.41	-0.8
1,059,502	-		Ac3H11_2759	0.41	-0.6
1,059,502	-		Ac3H11_2759	0.41	+1.0
1,059,585	+		Ac3H11_2759	0.51	+0.4
1,059,586	-		Ac3H11_2759	0.51	-0.3
1,059,910	-		Ac3H11_2759	0.88	+0.1
1,060,273	+				+0.2
1,060,274	-				+0.4
1,060,274	-				+0.7
1,060,309	+				-0.6
1,060,363	+		Ac3H11_2760	0.11	-0.7
1,060,363	+		Ac3H11_2760	0.11	+0.3
1,060,477	+		Ac3H11_2760	0.24	+0.1
1,060,477	+		Ac3H11_2760	0.24	-0.3
1,060,477	+		Ac3H11_2760	0.24	+0.1
1,060,478	-		Ac3H11_2760	0.24	+0.2
1,060,478	-		Ac3H11_2760	0.24	-0.6
1,060,543	+		Ac3H11_2760	0.32	+1.5
1,060,543	+		Ac3H11_2760	0.32	-1.8
1,060,543	+		Ac3H11_2760	0.32	-0.3
1,060,543	+		Ac3H11_2760	0.32	-2.0
1,060,543	+		Ac3H11_2760	0.32	+0.5
1,060,544	-		Ac3H11_2760	0.32	+0.3
1,060,544	-		Ac3H11_2760	0.32	-0.0
1,060,544	-		Ac3H11_2760	0.32	-0.8
1,060,544	-		Ac3H11_2760	0.32	-0.6
1,060,544	-		Ac3H11_2760	0.32	-0.5
1,060,544	-		Ac3H11_2760	0.32	+0.2
1,060,634	-		Ac3H11_2760	0.42	-0.4
1,060,714	+		Ac3H11_2760	0.51	-0.8
1,060,714	+		Ac3H11_2760	0.51	-0.1
1,060,715	-		Ac3H11_2760	0.51	+1.0
1,060,766	-		Ac3H11_2760	0.57	+1.4
1,060,766	-		Ac3H11_2760	0.57	-1.1
1,060,789	+		Ac3H11_2760	0.60	-0.2
1,060,928	-		Ac3H11_2760	0.76	-0.9
1,061,019	+		Ac3H11_2760	0.86	+0.3