Experiment: Tetracycline 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2226 and Ac3H11_2227 overlap by 4 nucleotides Ac3H11_2227 and Ac3H11_2228 overlap by 4 nucleotides
Ac3H11_2226 - Zinc uptake regulation protein ZUR, at 463,324 to 463,749
_2226
Ac3H11_2227 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 463,746 to 464,429
_2227
Ac3H11_2228 - ABC-type antimicrobial peptide transport system, permease component, at 464,426 to 465,661
_2228
Position (kb) 463
464
465 Strain fitness (log2 ratio) -2
-1
0
1
2 at 462.830 kb on + strand at 462.830 kb on + strand at 462.830 kb on + strand at 462.830 kb on + strand at 462.831 kb on - strand at 462.831 kb on - strand at 462.831 kb on - strand at 462.846 kb on + strand at 462.881 kb on + strand at 462.881 kb on + strand at 462.882 kb on - strand at 462.882 kb on - strand at 462.924 kb on - strand at 462.924 kb on - strand at 462.981 kb on + strand at 462.981 kb on + strand at 462.982 kb on - strand at 462.985 kb on + strand at 462.986 kb on - strand at 462.989 kb on - strand at 462.991 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.074 kb on + strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.075 kb on - strand at 463.077 kb on + strand at 463.077 kb on + strand at 463.078 kb on - strand at 463.078 kb on - strand at 463.193 kb on + strand at 463.193 kb on + strand at 463.193 kb on + strand at 463.194 kb on - strand at 463.194 kb on - strand at 463.226 kb on + strand at 463.226 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.271 kb on + strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.272 kb on - strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.275 kb on + strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.276 kb on - strand at 463.364 kb on - strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.770 kb on + strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.771 kb on - strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.772 kb on + strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.773 kb on - strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.776 kb on + strand at 463.777 kb on - strand at 463.777 kb on - strand at 464.016 kb on + strand, within Ac3H11_2227 at 464.016 kb on + strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.017 kb on - strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.020 kb on + strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.021 kb on - strand, within Ac3H11_2227 at 464.062 kb on - strand, within Ac3H11_2227 at 464.096 kb on + strand, within Ac3H11_2227 at 464.097 kb on - strand, within Ac3H11_2227 at 464.097 kb on - strand, within Ac3H11_2227 at 464.390 kb on - strand at 464.465 kb on + strand at 464.466 kb on - strand at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.756 kb on + strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.757 kb on - strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.792 kb on + strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.793 kb on - strand, within Ac3H11_2228 at 464.804 kb on + strand, within Ac3H11_2228 at 464.805 kb on - strand, within Ac3H11_2228 at 464.805 kb on - strand, within Ac3H11_2228 at 464.981 kb on + strand, within Ac3H11_2228
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0001 mg/ml remove 462,830 + +0.3 462,830 + -0.1 462,830 + -0.1 462,830 + -1.5 462,831 - -0.3 462,831 - +0.0 462,831 - -0.7 462,846 + +0.3 462,881 + +0.1 462,881 + +0.0 462,882 - -1.1 462,882 - +0.8 462,924 - -0.3 462,924 - +0.4 462,981 + +0.2 462,981 + -0.9 462,982 - +0.5 462,985 + -0.3 462,986 - -0.7 462,989 - +0.0 462,991 + -0.1 463,074 + +0.0 463,074 + -1.9 463,074 + +0.5 463,074 + -1.7 463,074 + -0.1 463,075 - +0.0 463,075 - -0.0 463,075 - -0.3 463,075 - +0.4 463,075 - +0.1 463,077 + +0.2 463,077 + -0.1 463,078 - +0.7 463,078 - -0.6 463,193 + -0.5 463,193 + +0.2 463,193 + +1.7 463,194 - -0.9 463,194 - +0.6 463,226 + +0.6 463,226 + -0.1 463,271 + +0.5 463,271 + +0.2 463,271 + -0.2 463,271 + -0.7 463,271 + -0.4 463,271 + +0.7 463,271 + -0.0 463,272 - +0.5 463,272 - +0.8 463,272 - +0.5 463,272 - +0.7 463,272 - +0.1 463,272 - -1.0 463,275 + +0.2 463,275 + +0.9 463,275 + +1.2 463,275 + -0.3 463,275 + +0.8 463,275 + +0.2 463,275 + +0.3 463,275 + -0.0 463,276 - -1.2 463,276 - -1.0 463,276 - -1.7 463,276 - -0.9 463,276 - -0.0 463,276 - -1.1 463,276 - -1.2 463,276 - +1.1 463,276 - +1.0 463,276 - -0.6 463,276 - -0.0 463,276 - -0.7 463,276 - +0.1 463,276 - -1.9 463,364 - +0.1 463,770 + +1.4 463,770 + +0.5 463,770 + +2.5 463,770 + +0.7 463,770 + +0.5 463,770 + -0.4 463,770 + -2.2 463,770 + +0.7 463,771 - -0.0 463,771 - -0.0 463,771 - -0.6 463,771 - +0.7 463,771 - +1.4 463,771 - +0.0 463,772 + +0.8 463,772 + -0.7 463,772 + -0.8 463,772 + -0.0 463,772 + -0.7 463,772 + +0.0 463,772 + -0.2 463,772 + -0.8 463,772 + +0.0 463,772 + +0.0 463,772 + -1.2 463,773 - +0.2 463,773 - +0.6 463,773 - -0.2 463,773 - +0.4 463,773 - +0.4 463,773 - -0.4 463,773 - +0.8 463,776 + +0.1 463,776 + +1.1 463,776 + +0.4 463,776 + -1.0 463,777 - +0.7 463,777 - +0.1 464,016 + Ac3H11_2227 0.39 +0.2 464,016 + Ac3H11_2227 0.39 +1.2 464,017 - Ac3H11_2227 0.40 -0.7 464,017 - Ac3H11_2227 0.40 +0.4 464,017 - Ac3H11_2227 0.40 +0.2 464,017 - Ac3H11_2227 0.40 +0.9 464,017 - Ac3H11_2227 0.40 -1.6 464,020 + Ac3H11_2227 0.40 +0.1 464,020 + Ac3H11_2227 0.40 -1.0 464,020 + Ac3H11_2227 0.40 -0.1 464,020 + Ac3H11_2227 0.40 +1.1 464,020 + Ac3H11_2227 0.40 +0.7 464,020 + Ac3H11_2227 0.40 -0.3 464,021 - Ac3H11_2227 0.40 +1.0 464,021 - Ac3H11_2227 0.40 -1.0 464,021 - Ac3H11_2227 0.40 +0.1 464,021 - Ac3H11_2227 0.40 +0.3 464,021 - Ac3H11_2227 0.40 -0.2 464,021 - Ac3H11_2227 0.40 -0.8 464,021 - Ac3H11_2227 0.40 -1.0 464,021 - Ac3H11_2227 0.40 +0.0 464,021 - Ac3H11_2227 0.40 +0.3 464,062 - Ac3H11_2227 0.46 -1.0 464,096 + Ac3H11_2227 0.51 +0.3 464,097 - Ac3H11_2227 0.51 +0.4 464,097 - Ac3H11_2227 0.51 -1.9 464,390 - +1.0 464,465 + +0.1 464,466 - -0.6 464,756 + Ac3H11_2228 0.27 +0.8 464,756 + Ac3H11_2228 0.27 +0.2 464,756 + Ac3H11_2228 0.27 -1.2 464,756 + Ac3H11_2228 0.27 +0.3 464,756 + Ac3H11_2228 0.27 +0.0 464,756 + Ac3H11_2228 0.27 -0.4 464,757 - Ac3H11_2228 0.27 -0.2 464,757 - Ac3H11_2228 0.27 +0.7 464,757 - Ac3H11_2228 0.27 +0.0 464,792 + Ac3H11_2228 0.30 +0.4 464,792 + Ac3H11_2228 0.30 +1.2 464,792 + Ac3H11_2228 0.30 -0.1 464,793 - Ac3H11_2228 0.30 +1.0 464,793 - Ac3H11_2228 0.30 +0.9 464,793 - Ac3H11_2228 0.30 -0.9 464,793 - Ac3H11_2228 0.30 -0.5 464,793 - Ac3H11_2228 0.30 +0.1 464,804 + Ac3H11_2228 0.31 -1.4 464,805 - Ac3H11_2228 0.31 +0.2 464,805 - Ac3H11_2228 0.31 -0.8 464,981 + Ac3H11_2228 0.45 +0.1
Or see this region's nucleotide sequence