Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25405 and AZOBR_RS25410 are separated by 8 nucleotides AZOBR_RS25410 and AZOBR_RS25415 overlap by 4 nucleotides
AZOBR_RS25405: AZOBR_RS25405 - C4-dicarboxylate ABC transporter, at 754,514 to 755,551
_RS25405
AZOBR_RS25410: AZOBR_RS25410 - C4-dicarboxylate ABC transporter permease, at 755,560 to 756,090
_RS25410
AZOBR_RS25415: AZOBR_RS25415 - C4-dicarboxylate ABC transporter, at 756,087 to 757,376
_RS25415
Position (kb) 755
756
757 Strain fitness (log2 ratio) -2
-1
0
1 at 754.604 kb on + strand at 754.605 kb on - strand at 754.616 kb on + strand at 754.617 kb on - strand at 754.617 kb on - strand at 754.668 kb on - strand, within AZOBR_RS25405 at 754.668 kb on - strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.234 kb on + strand, within AZOBR_RS25405 at 755.235 kb on - strand, within AZOBR_RS25405 at 755.235 kb on - strand, within AZOBR_RS25405 at 755.235 kb on - strand, within AZOBR_RS25405 at 755.235 kb on - strand, within AZOBR_RS25405 at 755.728 kb on + strand, within AZOBR_RS25410 at 755.728 kb on + strand, within AZOBR_RS25410 at 755.728 kb on + strand, within AZOBR_RS25410 at 755.729 kb on - strand, within AZOBR_RS25410 at 755.930 kb on - strand, within AZOBR_RS25410 at 755.977 kb on + strand, within AZOBR_RS25410 at 756.225 kb on + strand, within AZOBR_RS25415 at 756.244 kb on - strand, within AZOBR_RS25415 at 756.558 kb on + strand, within AZOBR_RS25415 at 756.558 kb on + strand, within AZOBR_RS25415 at 756.559 kb on - strand, within AZOBR_RS25415 at 756.559 kb on - strand, within AZOBR_RS25415 at 756.859 kb on - strand, within AZOBR_RS25415
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 754,604 + +0.4 754,605 - -1.9 754,616 + +0.5 754,617 - +0.0 754,617 - +0.6 754,668 - AZOBR_RS25405 0.15 +0.0 754,668 - AZOBR_RS25405 0.15 -1.5 755,234 + AZOBR_RS25405 0.69 +0.8 755,234 + AZOBR_RS25405 0.69 +0.3 755,234 + AZOBR_RS25405 0.69 -0.4 755,234 + AZOBR_RS25405 0.69 -0.5 755,234 + AZOBR_RS25405 0.69 -0.8 755,234 + AZOBR_RS25405 0.69 +0.1 755,234 + AZOBR_RS25405 0.69 +0.4 755,235 - AZOBR_RS25405 0.69 +0.3 755,235 - AZOBR_RS25405 0.69 +0.3 755,235 - AZOBR_RS25405 0.69 +0.8 755,235 - AZOBR_RS25405 0.69 -0.4 755,728 + AZOBR_RS25410 0.32 +1.3 755,728 + AZOBR_RS25410 0.32 +0.2 755,728 + AZOBR_RS25410 0.32 +0.1 755,729 - AZOBR_RS25410 0.32 +1.2 755,930 - AZOBR_RS25410 0.70 +1.0 755,977 + AZOBR_RS25410 0.79 +0.1 756,225 + AZOBR_RS25415 0.11 -0.0 756,244 - AZOBR_RS25415 0.12 +1.0 756,558 + AZOBR_RS25415 0.37 -0.1 756,558 + AZOBR_RS25415 0.37 -0.4 756,559 - AZOBR_RS25415 0.37 -0.2 756,559 - AZOBR_RS25415 0.37 +0.5 756,859 - AZOBR_RS25415 0.60 +0.0
Or see this region's nucleotide sequence