Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07050 and AZOBR_RS07055 are separated by 180 nucleotides AZOBR_RS07055 and AZOBR_RS07060 are separated by 144 nucleotides AZOBR_RS07060 and AZOBR_RS07065 are separated by 416 nucleotides
AZOBR_RS07050: AZOBR_RS07050 - transcriptional regulator, at 1,491,933 to 1,493,327
_RS07050
AZOBR_RS07055: AZOBR_RS07055 - hypothetical protein, at 1,493,508 to 1,493,720
_RS07055
AZOBR_RS07060: AZOBR_RS07060 - hypothetical protein, at 1,493,865 to 1,494,188
_RS07060
AZOBR_RS07065: AZOBR_RS07065 - membrane protein, at 1,494,605 to 1,495,330
_RS07065
Position (kb)
1493
1494 Strain fitness (log2 ratio)
-1
0
1 at 1492.612 kb on + strand, within AZOBR_RS07050 at 1492.613 kb on - strand, within AZOBR_RS07050 at 1492.735 kb on + strand, within AZOBR_RS07050 at 1492.736 kb on - strand, within AZOBR_RS07050 at 1492.736 kb on - strand, within AZOBR_RS07050 at 1492.922 kb on - strand, within AZOBR_RS07050 at 1493.539 kb on - strand, within AZOBR_RS07055 at 1493.539 kb on - strand, within AZOBR_RS07055 at 1493.539 kb on - strand, within AZOBR_RS07055 at 1493.775 kb on + strand at 1493.776 kb on - strand at 1493.776 kb on - strand at 1493.827 kb on - strand at 1493.844 kb on - strand at 1493.972 kb on - strand, within AZOBR_RS07060 at 1494.374 kb on + strand at 1494.374 kb on + strand at 1494.375 kb on - strand at 1494.375 kb on - strand at 1494.378 kb on - strand at 1494.378 kb on - strand at 1494.505 kb on + strand at 1494.506 kb on - strand at 1494.506 kb on - strand at 1494.506 kb on - strand at 1494.506 kb on - strand at 1494.506 kb on - strand at 1494.506 kb on - strand at 1494.506 kb on - strand at 1494.707 kb on + strand, within AZOBR_RS07065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 1,492,612 + AZOBR_RS07050 0.49 -1.1 1,492,613 - AZOBR_RS07050 0.49 +0.8 1,492,735 + AZOBR_RS07050 0.57 -1.3 1,492,736 - AZOBR_RS07050 0.58 +0.3 1,492,736 - AZOBR_RS07050 0.58 -0.5 1,492,922 - AZOBR_RS07050 0.71 -0.9 1,493,539 - AZOBR_RS07055 0.15 -0.0 1,493,539 - AZOBR_RS07055 0.15 +0.5 1,493,539 - AZOBR_RS07055 0.15 -0.1 1,493,775 + +0.8 1,493,776 - +0.7 1,493,776 - +0.3 1,493,827 - +0.4 1,493,844 - +0.1 1,493,972 - AZOBR_RS07060 0.33 +0.4 1,494,374 + +0.5 1,494,374 + -0.0 1,494,375 - +0.5 1,494,375 - +0.3 1,494,378 - -0.1 1,494,378 - -0.4 1,494,505 + +0.4 1,494,506 - +0.4 1,494,506 - -0.0 1,494,506 - +0.6 1,494,506 - -0.5 1,494,506 - -1.5 1,494,506 - -0.1 1,494,506 - +0.3 1,494,707 + AZOBR_RS07065 0.14 +0.1
Or see this region's nucleotide sequence