Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25010 and AO353_25015 are separated by 103 nucleotides AO353_25015 and AO353_25020 are separated by 60 nucleotides AO353_25020 and AO353_25025 are separated by 160 nucleotides
AO353_25010: AO353_25010 - LysR family transcriptional regulator, at 5,516,929 to 5,517,852
_25010
AO353_25015: AO353_25015 - polyketide cyclase, at 5,517,956 to 5,518,513
_25015
AO353_25020: AO353_25020 - lysine transporter LysE, at 5,518,574 to 5,519,203
_25020
AO353_25025: AO353_25025 - cupin, at 5,519,364 to 5,519,708
_25025
Position (kb)
5517
5518
5519 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5517.001 kb on + strand at 5517.001 kb on + strand at 5517.002 kb on - strand at 5517.002 kb on - strand at 5517.002 kb on - strand at 5517.017 kb on + strand at 5517.018 kb on - strand at 5517.043 kb on + strand, within AO353_25010 at 5517.043 kb on + strand, within AO353_25010 at 5517.044 kb on - strand, within AO353_25010 at 5517.044 kb on - strand, within AO353_25010 at 5517.115 kb on - strand, within AO353_25010 at 5517.214 kb on - strand, within AO353_25010 at 5517.214 kb on - strand, within AO353_25010 at 5517.214 kb on - strand, within AO353_25010 at 5517.215 kb on + strand, within AO353_25010 at 5517.215 kb on + strand, within AO353_25010 at 5517.215 kb on + strand, within AO353_25010 at 5517.216 kb on - strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.285 kb on + strand, within AO353_25010 at 5517.286 kb on - strand, within AO353_25010 at 5517.286 kb on - strand at 5517.286 kb on - strand, within AO353_25010 at 5517.286 kb on - strand, within AO353_25010 at 5517.286 kb on - strand, within AO353_25010 at 5517.286 kb on - strand, within AO353_25010 at 5517.286 kb on - strand, within AO353_25010 at 5517.286 kb on - strand, within AO353_25010 at 5517.342 kb on - strand, within AO353_25010 at 5517.500 kb on + strand, within AO353_25010 at 5517.604 kb on + strand, within AO353_25010 at 5517.604 kb on + strand, within AO353_25010 at 5517.605 kb on - strand, within AO353_25010 at 5517.605 kb on - strand, within AO353_25010 at 5517.605 kb on - strand, within AO353_25010 at 5517.605 kb on - strand, within AO353_25010 at 5517.650 kb on + strand, within AO353_25010 at 5517.651 kb on - strand, within AO353_25010 at 5517.659 kb on + strand, within AO353_25010 at 5517.659 kb on + strand, within AO353_25010 at 5517.660 kb on - strand, within AO353_25010 at 5517.660 kb on - strand, within AO353_25010 at 5517.660 kb on - strand, within AO353_25010 at 5517.717 kb on + strand, within AO353_25010 at 5517.718 kb on - strand, within AO353_25010 at 5517.770 kb on - strand at 5517.846 kb on - strand at 5517.886 kb on - strand at 5518.090 kb on + strand, within AO353_25015 at 5518.090 kb on + strand, within AO353_25015 at 5518.090 kb on + strand, within AO353_25015 at 5518.090 kb on + strand, within AO353_25015 at 5518.090 kb on + strand, within AO353_25015 at 5518.091 kb on - strand, within AO353_25015 at 5518.091 kb on - strand, within AO353_25015 at 5518.363 kb on + strand, within AO353_25015 at 5518.427 kb on + strand, within AO353_25015 at 5518.427 kb on + strand, within AO353_25015 at 5518.428 kb on - strand, within AO353_25015 at 5518.474 kb on + strand at 5518.475 kb on - strand at 5518.475 kb on - strand at 5518.511 kb on + strand at 5518.511 kb on + strand at 5518.511 kb on + strand at 5518.512 kb on - strand at 5518.512 kb on - strand at 5518.512 kb on - strand at 5518.512 kb on - strand at 5518.620 kb on - strand at 5518.707 kb on + strand, within AO353_25020 at 5518.707 kb on + strand, within AO353_25020 at 5518.707 kb on + strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.708 kb on - strand, within AO353_25020 at 5518.761 kb on + strand, within AO353_25020 at 5518.762 kb on - strand, within AO353_25020 at 5518.762 kb on - strand, within AO353_25020 at 5518.762 kb on - strand, within AO353_25020 at 5518.762 kb on - strand, within AO353_25020 at 5518.802 kb on + strand at 5518.899 kb on + strand, within AO353_25020 at 5518.899 kb on + strand, within AO353_25020 at 5518.900 kb on - strand, within AO353_25020 at 5518.938 kb on - strand, within AO353_25020 at 5518.938 kb on - strand, within AO353_25020 at 5518.950 kb on + strand, within AO353_25020 at 5518.950 kb on + strand, within AO353_25020 at 5518.950 kb on + strand, within AO353_25020 at 5518.951 kb on - strand, within AO353_25020 at 5519.048 kb on + strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.049 kb on - strand, within AO353_25020 at 5519.050 kb on + strand, within AO353_25020 at 5519.050 kb on + strand, within AO353_25020 at 5519.051 kb on - strand, within AO353_25020 at 5519.051 kb on - strand, within AO353_25020 at 5519.051 kb on - strand, within AO353_25020 at 5519.051 kb on - strand, within AO353_25020 at 5519.051 kb on - strand, within AO353_25020 at 5519.051 kb on - strand, within AO353_25020 at 5519.098 kb on + strand, within AO353_25020 at 5519.098 kb on + strand, within AO353_25020 at 5519.099 kb on - strand, within AO353_25020 at 5519.099 kb on - strand, within AO353_25020 at 5519.099 kb on - strand, within AO353_25020 at 5519.116 kb on + strand, within AO353_25020 at 5519.117 kb on - strand, within AO353_25020 at 5519.165 kb on + strand at 5519.165 kb on + strand at 5519.166 kb on - strand at 5519.170 kb on + strand at 5519.170 kb on + strand at 5519.178 kb on + strand at 5519.179 kb on - strand at 5519.179 kb on - strand at 5519.179 kb on - strand at 5519.191 kb on + strand at 5519.191 kb on + strand at 5519.191 kb on + strand at 5519.191 kb on + strand at 5519.191 kb on + strand at 5519.192 kb on - strand at 5519.192 kb on - strand at 5519.192 kb on - strand at 5519.192 kb on - strand at 5519.208 kb on + strand at 5519.208 kb on + strand at 5519.208 kb on + strand at 5519.209 kb on - strand at 5519.209 kb on - strand at 5519.209 kb on - strand at 5519.242 kb on - strand at 5519.250 kb on + strand at 5519.250 kb on + strand at 5519.250 kb on + strand at 5519.251 kb on - strand at 5519.251 kb on - strand at 5519.251 kb on - strand at 5519.294 kb on + strand at 5519.295 kb on - strand at 5519.295 kb on - strand at 5519.295 kb on - strand at 5519.323 kb on + strand at 5519.333 kb on + strand at 5519.334 kb on - strand at 5519.381 kb on - strand at 5519.413 kb on + strand, within AO353_25025 at 5519.413 kb on + strand, within AO353_25025 at 5519.414 kb on - strand, within AO353_25025 at 5519.414 kb on - strand, within AO353_25025 at 5519.468 kb on + strand at 5519.468 kb on + strand, within AO353_25025 at 5519.468 kb on + strand, within AO353_25025 at 5519.469 kb on - strand, within AO353_25025 at 5519.469 kb on - strand, within AO353_25025 at 5519.469 kb on - strand, within AO353_25025 at 5519.469 kb on - strand, within AO353_25025 at 5519.469 kb on - strand, within AO353_25025 at 5519.477 kb on + strand, within AO353_25025 at 5519.478 kb on - strand, within AO353_25025
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 5,517,001 + +1.0 5,517,001 + +0.5 5,517,002 - +0.6 5,517,002 - -1.6 5,517,002 - -0.2 5,517,017 + +0.5 5,517,018 - +1.0 5,517,043 + AO353_25010 0.12 -1.2 5,517,043 + AO353_25010 0.12 -0.9 5,517,044 - AO353_25010 0.12 -1.0 5,517,044 - AO353_25010 0.12 +0.7 5,517,115 - AO353_25010 0.20 +0.6 5,517,214 - AO353_25010 0.31 +0.3 5,517,214 - AO353_25010 0.31 -1.0 5,517,214 - AO353_25010 0.31 +0.3 5,517,215 + AO353_25010 0.31 +0.2 5,517,215 + AO353_25010 0.31 +0.6 5,517,215 + AO353_25010 0.31 -1.4 5,517,216 - AO353_25010 0.31 +0.1 5,517,285 + AO353_25010 0.39 -0.4 5,517,285 + AO353_25010 0.39 +0.2 5,517,285 + AO353_25010 0.39 +1.8 5,517,285 + AO353_25010 0.39 -0.7 5,517,285 + AO353_25010 0.39 +0.4 5,517,285 + AO353_25010 0.39 -1.4 5,517,285 + AO353_25010 0.39 +0.6 5,517,286 - AO353_25010 0.39 -0.6 5,517,286 - +2.2 5,517,286 - AO353_25010 0.39 -0.5 5,517,286 - AO353_25010 0.39 +1.6 5,517,286 - AO353_25010 0.39 -0.8 5,517,286 - AO353_25010 0.39 +0.8 5,517,286 - AO353_25010 0.39 -0.9 5,517,286 - AO353_25010 0.39 +1.1 5,517,342 - AO353_25010 0.45 -0.6 5,517,500 + AO353_25010 0.62 +1.4 5,517,604 + AO353_25010 0.73 +0.7 5,517,604 + AO353_25010 0.73 -0.3 5,517,605 - AO353_25010 0.73 -0.1 5,517,605 - AO353_25010 0.73 -1.1 5,517,605 - AO353_25010 0.73 +0.2 5,517,605 - AO353_25010 0.73 -0.8 5,517,650 + AO353_25010 0.78 -0.9 5,517,651 - AO353_25010 0.78 -0.1 5,517,659 + AO353_25010 0.79 +0.1 5,517,659 + AO353_25010 0.79 +1.5 5,517,660 - AO353_25010 0.79 -0.1 5,517,660 - AO353_25010 0.79 +0.9 5,517,660 - AO353_25010 0.79 +0.8 5,517,717 + AO353_25010 0.85 -1.6 5,517,718 - AO353_25010 0.85 +1.8 5,517,770 - +0.1 5,517,846 - +2.2 5,517,886 - -0.2 5,518,090 + AO353_25015 0.24 -0.1 5,518,090 + AO353_25015 0.24 -1.6 5,518,090 + AO353_25015 0.24 -1.0 5,518,090 + AO353_25015 0.24 -0.9 5,518,090 + AO353_25015 0.24 +1.2 5,518,091 - AO353_25015 0.24 -1.1 5,518,091 - AO353_25015 0.24 -0.1 5,518,363 + AO353_25015 0.73 -0.8 5,518,427 + AO353_25015 0.84 -0.6 5,518,427 + AO353_25015 0.84 -2.1 5,518,428 - AO353_25015 0.85 -0.6 5,518,474 + +1.2 5,518,475 - +0.2 5,518,475 - +0.9 5,518,511 + +0.2 5,518,511 + -0.1 5,518,511 + +1.5 5,518,512 - +0.5 5,518,512 - +0.2 5,518,512 - -1.8 5,518,512 - +0.5 5,518,620 - -0.1 5,518,707 + AO353_25020 0.21 -0.5 5,518,707 + AO353_25020 0.21 -0.0 5,518,707 + AO353_25020 0.21 -1.4 5,518,708 - AO353_25020 0.21 +1.6 5,518,708 - AO353_25020 0.21 +0.2 5,518,708 - AO353_25020 0.21 +2.6 5,518,708 - AO353_25020 0.21 -0.0 5,518,708 - AO353_25020 0.21 +0.9 5,518,708 - AO353_25020 0.21 -2.4 5,518,708 - AO353_25020 0.21 -0.1 5,518,761 + AO353_25020 0.30 -0.2 5,518,762 - AO353_25020 0.30 +0.5 5,518,762 - AO353_25020 0.30 +0.9 5,518,762 - AO353_25020 0.30 -1.2 5,518,762 - AO353_25020 0.30 -0.7 5,518,802 + +0.2 5,518,899 + AO353_25020 0.52 -1.9 5,518,899 + AO353_25020 0.52 -1.1 5,518,900 - AO353_25020 0.52 +0.3 5,518,938 - AO353_25020 0.58 +0.1 5,518,938 - AO353_25020 0.58 +0.6 5,518,950 + AO353_25020 0.60 +1.0 5,518,950 + AO353_25020 0.60 +0.8 5,518,950 + AO353_25020 0.60 -2.3 5,518,951 - AO353_25020 0.60 +0.1 5,519,048 + AO353_25020 0.75 +0.6 5,519,049 - AO353_25020 0.75 -0.1 5,519,049 - AO353_25020 0.75 +1.2 5,519,049 - AO353_25020 0.75 -0.3 5,519,049 - AO353_25020 0.75 +0.3 5,519,049 - AO353_25020 0.75 +0.9 5,519,049 - AO353_25020 0.75 +0.7 5,519,049 - AO353_25020 0.75 +1.2 5,519,050 + AO353_25020 0.76 -1.8 5,519,050 + AO353_25020 0.76 -0.6 5,519,051 - AO353_25020 0.76 +0.1 5,519,051 - AO353_25020 0.76 +1.2 5,519,051 - AO353_25020 0.76 -0.0 5,519,051 - AO353_25020 0.76 -0.5 5,519,051 - AO353_25020 0.76 -0.9 5,519,051 - AO353_25020 0.76 -1.5 5,519,098 + AO353_25020 0.83 +0.6 5,519,098 + AO353_25020 0.83 -0.7 5,519,099 - AO353_25020 0.83 +0.0 5,519,099 - AO353_25020 0.83 +0.0 5,519,099 - AO353_25020 0.83 +1.2 5,519,116 + AO353_25020 0.86 +0.1 5,519,117 - AO353_25020 0.86 -0.0 5,519,165 + -0.1 5,519,165 + -1.4 5,519,166 - -2.5 5,519,170 + +2.1 5,519,170 + -1.1 5,519,178 + +1.6 5,519,179 - -1.0 5,519,179 - -0.3 5,519,179 - +0.9 5,519,191 + -0.4 5,519,191 + -0.5 5,519,191 + -0.8 5,519,191 + -0.8 5,519,191 + +1.8 5,519,192 - +0.4 5,519,192 - +0.4 5,519,192 - +0.5 5,519,192 - +0.2 5,519,208 + -0.3 5,519,208 + -1.4 5,519,208 + +2.2 5,519,209 - -0.9 5,519,209 - +2.2 5,519,209 - -2.0 5,519,242 - +1.2 5,519,250 + +0.3 5,519,250 + -2.4 5,519,250 + -0.4 5,519,251 - +0.6 5,519,251 - +0.8 5,519,251 - +0.5 5,519,294 + +0.4 5,519,295 - +0.2 5,519,295 - +0.3 5,519,295 - +0.1 5,519,323 + +0.2 5,519,333 + +1.0 5,519,334 - +3.2 5,519,381 - -1.1 5,519,413 + AO353_25025 0.14 +0.5 5,519,413 + AO353_25025 0.14 +0.9 5,519,414 - AO353_25025 0.14 +0.0 5,519,414 - AO353_25025 0.14 -0.2 5,519,468 + +1.2 5,519,468 + AO353_25025 0.30 -2.6 5,519,468 + AO353_25025 0.30 +0.5 5,519,469 - AO353_25025 0.30 +0.6 5,519,469 - AO353_25025 0.30 -0.6 5,519,469 - AO353_25025 0.30 +1.5 5,519,469 - AO353_25025 0.30 +0.4 5,519,469 - AO353_25025 0.30 +0.9 5,519,477 + AO353_25025 0.33 +0.0 5,519,478 - AO353_25025 0.33 -0.2
Or see this region's nucleotide sequence