Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24400 and AO353_24405 are separated by 52 nucleotides AO353_24405 and AO353_24410 are separated by 277 nucleotides AO353_24410 and AO353_24415 are separated by 46 nucleotides AO353_24415 and AO353_24420 overlap by 17 nucleotides
AO353_24400: AO353_24400 - ACP phosphodiesterase, at 5,365,246 to 5,365,851
_24400
AO353_24405: AO353_24405 - ArsR family transcriptional regulator, at 5,365,904 to 5,366,407
_24405
AO353_24410: AO353_24410 - amino acid ABC transporter substrate-binding protein, at 5,366,685 to 5,367,506
_24410
AO353_24415: AO353_24415 - glutamine ABC transporter ATP-binding protein, at 5,367,553 to 5,368,356
_24415
AO353_24420: AO353_24420 - amino acid ABC transporter permease, at 5,368,340 to 5,369,008
_24420
Position (kb)
5366
5367
5368 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5365.697 kb on + strand, within AO353_24400 at 5365.726 kb on + strand, within AO353_24400 at 5365.726 kb on + strand, within AO353_24400 at 5365.747 kb on + strand, within AO353_24400 at 5365.748 kb on - strand, within AO353_24400 at 5365.905 kb on + strand at 5365.929 kb on - strand at 5366.032 kb on + strand, within AO353_24405 at 5366.055 kb on - strand, within AO353_24405 at 5366.168 kb on + strand, within AO353_24405 at 5366.278 kb on + strand, within AO353_24405 at 5366.279 kb on - strand, within AO353_24405 at 5366.279 kb on - strand, within AO353_24405 at 5366.367 kb on - strand at 5366.367 kb on - strand at 5366.409 kb on + strand at 5366.497 kb on + strand at 5366.506 kb on + strand at 5366.519 kb on + strand at 5366.520 kb on - strand at 5366.537 kb on + strand at 5366.538 kb on - strand at 5366.538 kb on - strand at 5366.616 kb on + strand at 5366.616 kb on + strand at 5366.678 kb on + strand at 5366.699 kb on + strand at 5366.699 kb on + strand at 5366.699 kb on + strand at 5366.700 kb on - strand at 5366.700 kb on - strand at 5366.700 kb on - strand at 5366.731 kb on + strand at 5366.731 kb on + strand at 5366.731 kb on + strand at 5366.731 kb on + strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.734 kb on + strand at 5366.735 kb on - strand at 5366.735 kb on - strand at 5366.847 kb on + strand, within AO353_24410 at 5366.847 kb on + strand, within AO353_24410 at 5366.847 kb on + strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.877 kb on + strand, within AO353_24410 at 5366.921 kb on - strand, within AO353_24410 at 5366.921 kb on - strand, within AO353_24410 at 5366.968 kb on + strand, within AO353_24410 at 5366.969 kb on - strand, within AO353_24410 at 5367.011 kb on + strand, within AO353_24410 at 5367.011 kb on + strand, within AO353_24410 at 5367.011 kb on + strand, within AO353_24410 at 5367.011 kb on + strand, within AO353_24410 at 5367.011 kb on + strand, within AO353_24410 at 5367.012 kb on - strand, within AO353_24410 at 5367.012 kb on - strand, within AO353_24410 at 5367.012 kb on - strand, within AO353_24410 at 5367.084 kb on + strand, within AO353_24410 at 5367.085 kb on - strand, within AO353_24410 at 5367.085 kb on - strand, within AO353_24410 at 5367.116 kb on + strand, within AO353_24410 at 5367.183 kb on - strand, within AO353_24410 at 5367.183 kb on - strand, within AO353_24410 at 5367.258 kb on - strand, within AO353_24410 at 5367.288 kb on - strand, within AO353_24410 at 5367.300 kb on - strand, within AO353_24410 at 5367.300 kb on - strand, within AO353_24410 at 5367.337 kb on + strand, within AO353_24410 at 5367.337 kb on + strand, within AO353_24410 at 5367.337 kb on + strand, within AO353_24410 at 5367.353 kb on - strand, within AO353_24410 at 5367.398 kb on + strand, within AO353_24410 at 5367.405 kb on + strand, within AO353_24410 at 5367.405 kb on + strand, within AO353_24410 at 5367.432 kb on + strand at 5367.433 kb on - strand at 5367.434 kb on + strand at 5367.462 kb on - strand at 5367.485 kb on + strand at 5367.505 kb on - strand at 5367.523 kb on - strand at 5367.601 kb on + strand at 5367.614 kb on + strand at 5367.707 kb on + strand, within AO353_24415 at 5367.783 kb on + strand, within AO353_24415 at 5368.044 kb on - strand, within AO353_24415 at 5368.081 kb on - strand, within AO353_24415 at 5368.128 kb on + strand, within AO353_24415 at 5368.164 kb on - strand, within AO353_24415 at 5368.298 kb on + strand at 5368.298 kb on + strand at 5368.347 kb on - strand at 5368.440 kb on + strand, within AO353_24420 at 5368.441 kb on - strand, within AO353_24420 at 5368.441 kb on - strand, within AO353_24420 at 5368.441 kb on - strand, within AO353_24420
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 5,365,697 + AO353_24400 0.74 +0.9 5,365,726 + AO353_24400 0.79 +2.0 5,365,726 + AO353_24400 0.79 +0.8 5,365,747 + AO353_24400 0.83 +0.6 5,365,748 - AO353_24400 0.83 -0.1 5,365,905 + -2.5 5,365,929 - +0.3 5,366,032 + AO353_24405 0.25 -0.5 5,366,055 - AO353_24405 0.30 -0.1 5,366,168 + AO353_24405 0.52 +1.4 5,366,278 + AO353_24405 0.74 +0.1 5,366,279 - AO353_24405 0.74 -2.6 5,366,279 - AO353_24405 0.74 +0.6 5,366,367 - -0.6 5,366,367 - -0.8 5,366,409 + +0.0 5,366,497 + +0.9 5,366,506 + -2.0 5,366,519 + +0.1 5,366,520 - +0.7 5,366,537 + +0.3 5,366,538 - +0.8 5,366,538 - +0.7 5,366,616 + -1.0 5,366,616 + +0.2 5,366,678 + -0.9 5,366,699 + +0.3 5,366,699 + -0.8 5,366,699 + +1.5 5,366,700 - +0.3 5,366,700 - -0.8 5,366,700 - -0.1 5,366,731 + -1.0 5,366,731 + +0.5 5,366,731 + -0.1 5,366,731 + +1.2 5,366,732 - +0.7 5,366,732 - +1.0 5,366,732 - -1.1 5,366,732 - +0.2 5,366,732 - -0.9 5,366,732 - -0.0 5,366,734 + +2.2 5,366,735 - +0.6 5,366,735 - -0.1 5,366,847 + AO353_24410 0.20 -1.3 5,366,847 + AO353_24410 0.20 +0.1 5,366,847 + AO353_24410 0.20 +1.0 5,366,848 - AO353_24410 0.20 -2.5 5,366,848 - AO353_24410 0.20 -1.1 5,366,848 - AO353_24410 0.20 +0.2 5,366,848 - +1.2 5,366,848 - AO353_24410 0.20 -0.5 5,366,848 - AO353_24410 0.20 +0.7 5,366,877 + AO353_24410 0.23 +0.4 5,366,921 - AO353_24410 0.29 +0.8 5,366,921 - AO353_24410 0.29 -0.1 5,366,968 + AO353_24410 0.34 -0.4 5,366,969 - AO353_24410 0.35 +0.1 5,367,011 + AO353_24410 0.40 +0.2 5,367,011 + AO353_24410 0.40 +0.2 5,367,011 + AO353_24410 0.40 -0.8 5,367,011 + AO353_24410 0.40 -0.3 5,367,011 + AO353_24410 0.40 +0.5 5,367,012 - AO353_24410 0.40 -0.8 5,367,012 - AO353_24410 0.40 -0.8 5,367,012 - AO353_24410 0.40 -0.5 5,367,084 + AO353_24410 0.49 +0.7 5,367,085 - AO353_24410 0.49 -0.8 5,367,085 - AO353_24410 0.49 +0.7 5,367,116 + AO353_24410 0.52 -0.6 5,367,183 - AO353_24410 0.61 -0.2 5,367,183 - AO353_24410 0.61 -1.2 5,367,258 - AO353_24410 0.70 -0.1 5,367,288 - AO353_24410 0.73 -0.1 5,367,300 - AO353_24410 0.75 -3.0 5,367,300 - AO353_24410 0.75 +0.0 5,367,337 + AO353_24410 0.79 +0.5 5,367,337 + AO353_24410 0.79 -0.8 5,367,337 + AO353_24410 0.79 +0.7 5,367,353 - AO353_24410 0.81 -0.8 5,367,398 + AO353_24410 0.87 +0.1 5,367,405 + AO353_24410 0.88 -1.3 5,367,405 + AO353_24410 0.88 -0.8 5,367,432 + +1.6 5,367,433 - +0.5 5,367,434 + +1.0 5,367,462 - -0.1 5,367,485 + +0.2 5,367,505 - +1.4 5,367,523 - -1.5 5,367,601 + +1.7 5,367,614 + +1.2 5,367,707 + AO353_24415 0.19 +0.1 5,367,783 + AO353_24415 0.29 -0.6 5,368,044 - AO353_24415 0.61 -2.2 5,368,081 - AO353_24415 0.66 -0.5 5,368,128 + AO353_24415 0.72 -1.3 5,368,164 - AO353_24415 0.76 -0.3 5,368,298 + -0.4 5,368,298 + +0.4 5,368,347 - +0.5 5,368,440 + AO353_24420 0.15 +0.8 5,368,441 - AO353_24420 0.15 -1.7 5,368,441 - AO353_24420 0.15 +0.4 5,368,441 - AO353_24420 0.15 -1.4
Or see this region's nucleotide sequence