Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23815 and AO353_23820 are separated by 13 nucleotides AO353_23820 and AO353_23825 are separated by 356 nucleotides
AO353_23815: AO353_23815 - hypothetical protein, at 5,225,666 to 5,225,854
_23815
AO353_23820: AO353_23820 - fe2+ zn2+ uptake regulation protein, at 5,225,868 to 5,226,245
_23820
AO353_23825: AO353_23825 - hypothetical protein, at 5,226,602 to 5,231,431
_23825
Position (kb)
5225
5226
5227 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5224.893 kb on + strand at 5224.894 kb on - strand at 5224.894 kb on - strand at 5224.894 kb on - strand at 5224.916 kb on - strand at 5224.967 kb on + strand at 5224.987 kb on - strand at 5224.994 kb on + strand at 5225.009 kb on - strand at 5225.051 kb on + strand at 5225.083 kb on + strand at 5225.094 kb on + strand at 5225.095 kb on - strand at 5225.095 kb on - strand at 5225.098 kb on + strand at 5225.098 kb on + strand at 5225.098 kb on + strand at 5225.099 kb on - strand at 5225.124 kb on + strand at 5225.125 kb on - strand at 5225.135 kb on - strand at 5225.140 kb on + strand at 5225.140 kb on + strand at 5225.175 kb on + strand at 5225.175 kb on + strand at 5225.176 kb on - strand at 5225.259 kb on + strand at 5225.345 kb on + strand at 5225.345 kb on + strand at 5225.391 kb on - strand at 5225.446 kb on + strand at 5225.446 kb on + strand at 5225.446 kb on + strand at 5225.447 kb on - strand at 5225.562 kb on - strand at 5225.627 kb on + strand at 5225.627 kb on + strand at 5225.628 kb on - strand at 5225.638 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.642 kb on + strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.643 kb on - strand at 5225.741 kb on + strand, within AO353_23815 at 5225.741 kb on + strand at 5225.741 kb on + strand, within AO353_23815 at 5225.742 kb on - strand at 5225.742 kb on - strand, within AO353_23815 at 5225.783 kb on + strand, within AO353_23815 at 5225.792 kb on - strand, within AO353_23815 at 5225.881 kb on + strand at 5225.914 kb on + strand, within AO353_23820 at 5225.914 kb on + strand, within AO353_23820 at 5225.915 kb on - strand, within AO353_23820 at 5226.241 kb on + strand at 5226.241 kb on + strand at 5226.241 kb on + strand at 5226.241 kb on + strand at 5226.242 kb on - strand at 5226.242 kb on - strand at 5226.242 kb on - strand at 5226.242 kb on - strand at 5226.303 kb on + strand at 5226.401 kb on + strand at 5226.402 kb on - strand at 5226.512 kb on + strand at 5226.529 kb on + strand at 5226.529 kb on + strand at 5226.529 kb on + strand at 5226.529 kb on + strand at 5226.529 kb on + strand at 5226.530 kb on - strand at 5226.576 kb on + strand at 5226.577 kb on - strand at 5226.583 kb on + strand at 5226.583 kb on + strand at 5226.584 kb on - strand at 5226.584 kb on - strand at 5226.584 kb on - strand at 5226.584 kb on - strand at 5226.584 kb on - strand at 5227.083 kb on + strand at 5227.083 kb on + strand at 5227.083 kb on + strand at 5227.091 kb on + strand, within AO353_23825 at 5227.091 kb on + strand, within AO353_23825 at 5227.118 kb on - strand, within AO353_23825 at 5227.118 kb on - strand, within AO353_23825 at 5227.152 kb on - strand, within AO353_23825 at 5227.152 kb on - strand, within AO353_23825
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 5,224,893 + -1.9 5,224,894 - -0.1 5,224,894 - +0.5 5,224,894 - +0.4 5,224,916 - +0.8 5,224,967 + -1.9 5,224,987 - -0.3 5,224,994 + +0.1 5,225,009 - -0.0 5,225,051 + -0.6 5,225,083 + +1.3 5,225,094 + +1.1 5,225,095 - +0.3 5,225,095 - -0.3 5,225,098 + +1.5 5,225,098 + -0.8 5,225,098 + -0.3 5,225,099 - -0.0 5,225,124 + -1.9 5,225,125 - -0.9 5,225,135 - -0.3 5,225,140 + -0.8 5,225,140 + -0.6 5,225,175 + -1.0 5,225,175 + -0.2 5,225,176 - -1.0 5,225,259 + -0.3 5,225,345 + +0.8 5,225,345 + -2.2 5,225,391 - +1.0 5,225,446 + +0.9 5,225,446 + -0.7 5,225,446 + +1.8 5,225,447 - +0.0 5,225,562 - -0.7 5,225,627 + +0.2 5,225,627 + +0.3 5,225,628 - -0.0 5,225,638 + +1.0 5,225,642 + -0.2 5,225,642 + +0.1 5,225,642 + +0.1 5,225,642 + +1.3 5,225,642 + +0.3 5,225,642 + -0.5 5,225,642 + -1.1 5,225,642 + -0.3 5,225,642 + -0.2 5,225,642 + -1.7 5,225,642 + +0.8 5,225,642 + -0.3 5,225,642 + -0.7 5,225,642 + +0.7 5,225,642 + -0.0 5,225,642 + +0.3 5,225,643 - -0.1 5,225,643 - +0.1 5,225,643 - +0.6 5,225,643 - -1.7 5,225,643 - -0.9 5,225,643 - +0.4 5,225,643 - -2.2 5,225,643 - -1.0 5,225,643 - -2.0 5,225,643 - -0.5 5,225,643 - -0.3 5,225,741 + AO353_23815 0.40 -0.9 5,225,741 + +0.3 5,225,741 + AO353_23815 0.40 +0.8 5,225,742 - -0.3 5,225,742 - AO353_23815 0.40 +0.3 5,225,783 + AO353_23815 0.62 +1.9 5,225,792 - AO353_23815 0.67 +0.9 5,225,881 + +1.3 5,225,914 + AO353_23820 0.12 +1.8 5,225,914 + AO353_23820 0.12 +0.3 5,225,915 - AO353_23820 0.12 +1.9 5,226,241 + -0.6 5,226,241 + +0.7 5,226,241 + +0.7 5,226,241 + +1.3 5,226,242 - -2.0 5,226,242 - +1.3 5,226,242 - +2.3 5,226,242 - -0.4 5,226,303 + +0.5 5,226,401 + -0.6 5,226,402 - +0.9 5,226,512 + +2.3 5,226,529 + -0.3 5,226,529 + +0.5 5,226,529 + +0.1 5,226,529 + -0.3 5,226,529 + -0.1 5,226,530 - -0.3 5,226,576 + -0.4 5,226,577 - +0.3 5,226,583 + -1.7 5,226,583 + +1.5 5,226,584 - -1.4 5,226,584 - -1.2 5,226,584 - -0.5 5,226,584 - +0.7 5,226,584 - +0.3 5,227,083 + +1.0 5,227,083 + +0.5 5,227,083 + -0.2 5,227,091 + AO353_23825 0.10 +1.7 5,227,091 + AO353_23825 0.10 -1.0 5,227,118 - AO353_23825 0.11 -1.8 5,227,118 - AO353_23825 0.11 +0.1 5,227,152 - AO353_23825 0.11 -0.0 5,227,152 - AO353_23825 0.11 -0.5
Or see this region's nucleotide sequence