Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23720 and AO353_23725 overlap by 8 nucleotides AO353_23725 and AO353_23730 overlap by 4 nucleotides AO353_23730 and AO353_23735 are separated by 5 nucleotides
AO353_23720: AO353_23720 - BatB protein, at 5,200,072 to 5,201,148
_23720
AO353_23725: AO353_23725 - hypothetical protein, at 5,201,141 to 5,201,635
_23725
AO353_23730: AO353_23730 - hypothetical protein, at 5,201,632 to 5,202,576
_23730
AO353_23735: AO353_23735 - AAA family ATPase, at 5,202,582 to 5,203,541
_23735
Position (kb) 5201
5202 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5200.238 kb on + strand, within AO353_23720 at 5200.238 kb on + strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.346 kb on + strand, within AO353_23720 at 5200.671 kb on + strand, within AO353_23720 at 5200.672 kb on - strand, within AO353_23720 at 5200.712 kb on + strand, within AO353_23720 at 5200.712 kb on + strand, within AO353_23720 at 5200.713 kb on - strand, within AO353_23720 at 5200.713 kb on - strand, within AO353_23720 at 5201.223 kb on + strand, within AO353_23725 at 5201.223 kb on + strand, within AO353_23725 at 5201.223 kb on + strand, within AO353_23725 at 5201.223 kb on + strand, within AO353_23725 at 5201.223 kb on + strand, within AO353_23725 at 5201.224 kb on - strand, within AO353_23725 at 5201.224 kb on - strand, within AO353_23725 at 5201.224 kb on - strand, within AO353_23725 at 5201.224 kb on - strand, within AO353_23725 at 5201.224 kb on - strand, within AO353_23725 at 5201.224 kb on - strand, within AO353_23725 at 5201.299 kb on + strand at 5201.329 kb on - strand, within AO353_23725 at 5201.406 kb on + strand, within AO353_23725 at 5201.482 kb on + strand, within AO353_23725 at 5201.483 kb on - strand, within AO353_23725 at 5201.501 kb on - strand, within AO353_23725 at 5201.501 kb on - strand, within AO353_23725 at 5201.552 kb on + strand, within AO353_23725 at 5201.666 kb on + strand at 5201.666 kb on + strand at 5201.666 kb on + strand at 5201.667 kb on - strand at 5201.700 kb on + strand at 5202.159 kb on - strand, within AO353_23730 at 5202.159 kb on - strand, within AO353_23730 at 5202.159 kb on - strand, within AO353_23730 at 5202.396 kb on - strand, within AO353_23730 at 5202.396 kb on - strand, within AO353_23730 at 5202.396 kb on - strand, within AO353_23730 at 5202.396 kb on - strand, within AO353_23730
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 5,200,238 + AO353_23720 0.15 -1.7 5,200,238 + AO353_23720 0.15 +0.3 5,200,239 - AO353_23720 0.16 -1.5 5,200,239 - AO353_23720 0.16 -1.6 5,200,239 - AO353_23720 0.16 +0.3 5,200,346 + AO353_23720 0.25 -1.3 5,200,671 + AO353_23720 0.56 -0.5 5,200,672 - AO353_23720 0.56 -0.5 5,200,712 + AO353_23720 0.59 -1.7 5,200,712 + AO353_23720 0.59 +0.7 5,200,713 - AO353_23720 0.60 +0.1 5,200,713 - AO353_23720 0.60 -1.7 5,201,223 + AO353_23725 0.17 -1.5 5,201,223 + AO353_23725 0.17 +0.6 5,201,223 + AO353_23725 0.17 -1.0 5,201,223 + AO353_23725 0.17 +0.3 5,201,223 + AO353_23725 0.17 -3.6 5,201,224 - AO353_23725 0.17 -2.2 5,201,224 - AO353_23725 0.17 -0.7 5,201,224 - AO353_23725 0.17 -0.6 5,201,224 - AO353_23725 0.17 +0.9 5,201,224 - AO353_23725 0.17 -0.3 5,201,224 - AO353_23725 0.17 -1.0 5,201,299 + -1.5 5,201,329 - AO353_23725 0.38 -1.3 5,201,406 + AO353_23725 0.54 -1.5 5,201,482 + AO353_23725 0.69 -1.0 5,201,483 - AO353_23725 0.69 -1.0 5,201,501 - AO353_23725 0.73 -1.5 5,201,501 - AO353_23725 0.73 -1.7 5,201,552 + AO353_23725 0.83 -1.4 5,201,666 + +0.7 5,201,666 + -0.4 5,201,666 + -0.1 5,201,667 - -0.1 5,201,700 + +0.1 5,202,159 - AO353_23730 0.56 -2.3 5,202,159 - AO353_23730 0.56 -0.5 5,202,159 - AO353_23730 0.56 -1.4 5,202,396 - AO353_23730 0.81 -1.0 5,202,396 - AO353_23730 0.81 -2.7 5,202,396 - AO353_23730 0.81 -2.0 5,202,396 - AO353_23730 0.81 -0.3
Or see this region's nucleotide sequence