Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21295 and AO353_21300 are separated by 110 nucleotides AO353_21300 and AO353_21305 are separated by 3 nucleotides
AO353_21295: AO353_21295 - hypothetical protein, at 4,659,387 to 4,660,784
_21295
AO353_21300: AO353_21300 - glycolate oxidase iron-sulfur subunit, at 4,660,895 to 4,662,112
_21300
AO353_21305: AO353_21305 - glycolate oxidase, at 4,662,116 to 4,663,174
_21305
Position (kb)
4660
4661
4662
4663 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4660.177 kb on + strand, within AO353_21295 at 4660.177 kb on + strand, within AO353_21295 at 4660.178 kb on - strand, within AO353_21295 at 4660.489 kb on + strand, within AO353_21295 at 4660.489 kb on + strand, within AO353_21295 at 4660.489 kb on + strand, within AO353_21295 at 4660.490 kb on - strand, within AO353_21295 at 4660.490 kb on - strand, within AO353_21295 at 4660.617 kb on + strand, within AO353_21295 at 4660.617 kb on + strand, within AO353_21295 at 4660.714 kb on + strand at 4660.714 kb on + strand at 4660.714 kb on + strand at 4660.715 kb on - strand at 4660.715 kb on - strand at 4660.715 kb on - strand at 4660.784 kb on + strand at 4660.784 kb on + strand at 4660.817 kb on - strand at 4660.904 kb on + strand at 4660.904 kb on + strand at 4660.905 kb on - strand at 4660.905 kb on - strand at 4661.073 kb on + strand, within AO353_21300 at 4661.073 kb on + strand, within AO353_21300 at 4661.073 kb on + strand, within AO353_21300 at 4661.073 kb on + strand, within AO353_21300 at 4661.074 kb on - strand, within AO353_21300 at 4661.074 kb on - strand, within AO353_21300 at 4661.145 kb on - strand, within AO353_21300 at 4661.145 kb on - strand, within AO353_21300 at 4661.145 kb on - strand, within AO353_21300 at 4661.473 kb on - strand, within AO353_21300 at 4661.510 kb on - strand, within AO353_21300 at 4661.955 kb on + strand, within AO353_21300 at 4661.955 kb on + strand, within AO353_21300 at 4661.955 kb on + strand, within AO353_21300 at 4661.955 kb on + strand, within AO353_21300 at 4661.956 kb on - strand, within AO353_21300 at 4661.956 kb on - strand, within AO353_21300 at 4662.000 kb on + strand at 4662.000 kb on + strand at 4662.001 kb on - strand at 4662.001 kb on - strand at 4662.001 kb on - strand at 4662.129 kb on + strand at 4662.130 kb on - strand at 4662.130 kb on - strand at 4662.130 kb on - strand at 4662.130 kb on - strand at 4662.130 kb on - strand at 4662.247 kb on - strand, within AO353_21305 at 4662.247 kb on - strand, within AO353_21305 at 4662.247 kb on - strand, within AO353_21305 at 4662.775 kb on + strand, within AO353_21305 at 4662.851 kb on + strand, within AO353_21305 at 4662.965 kb on - strand, within AO353_21305 at 4663.002 kb on + strand at 4663.002 kb on + strand, within AO353_21305 at 4663.003 kb on - strand, within AO353_21305 at 4663.003 kb on - strand, within AO353_21305 at 4663.003 kb on - strand, within AO353_21305
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 4,660,177 + AO353_21295 0.57 -0.5 4,660,177 + AO353_21295 0.57 +1.5 4,660,178 - AO353_21295 0.57 +0.5 4,660,489 + AO353_21295 0.79 -1.6 4,660,489 + AO353_21295 0.79 -1.4 4,660,489 + AO353_21295 0.79 +0.0 4,660,490 - AO353_21295 0.79 +1.5 4,660,490 - AO353_21295 0.79 +0.5 4,660,617 + AO353_21295 0.88 +1.1 4,660,617 + AO353_21295 0.88 +0.5 4,660,714 + -0.5 4,660,714 + -1.3 4,660,714 + -0.1 4,660,715 - +0.8 4,660,715 - +1.3 4,660,715 - +0.6 4,660,784 + +0.3 4,660,784 + -0.2 4,660,817 - -2.2 4,660,904 + -0.3 4,660,904 + -0.4 4,660,905 - -0.5 4,660,905 - -0.4 4,661,073 + AO353_21300 0.15 -2.1 4,661,073 + AO353_21300 0.15 -0.5 4,661,073 + AO353_21300 0.15 -1.1 4,661,073 + AO353_21300 0.15 -3.0 4,661,074 - AO353_21300 0.15 -0.5 4,661,074 - AO353_21300 0.15 -0.2 4,661,145 - AO353_21300 0.21 -0.1 4,661,145 - AO353_21300 0.21 +0.9 4,661,145 - AO353_21300 0.21 -1.3 4,661,473 - AO353_21300 0.47 +0.7 4,661,510 - AO353_21300 0.50 -0.4 4,661,955 + AO353_21300 0.87 -1.5 4,661,955 + AO353_21300 0.87 -0.9 4,661,955 + AO353_21300 0.87 -1.3 4,661,955 + AO353_21300 0.87 -0.7 4,661,956 - AO353_21300 0.87 -1.2 4,661,956 - AO353_21300 0.87 +0.1 4,662,000 + +0.2 4,662,000 + -1.5 4,662,001 - -1.2 4,662,001 - -2.1 4,662,001 - -2.0 4,662,129 + -2.5 4,662,130 - -0.2 4,662,130 - -0.1 4,662,130 - -0.1 4,662,130 - +0.2 4,662,130 - +0.1 4,662,247 - AO353_21305 0.12 -0.7 4,662,247 - AO353_21305 0.12 +0.0 4,662,247 - AO353_21305 0.12 +0.7 4,662,775 + AO353_21305 0.62 +0.1 4,662,851 + AO353_21305 0.69 -0.6 4,662,965 - AO353_21305 0.80 +0.1 4,663,002 + +0.5 4,663,002 + AO353_21305 0.84 -0.9 4,663,003 - AO353_21305 0.84 +0.9 4,663,003 - AO353_21305 0.84 -0.5 4,663,003 - AO353_21305 0.84 -2.2
Or see this region's nucleotide sequence