Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14575 and AO353_14580 are separated by 218 nucleotides AO353_14580 and AO353_14585 overlap by 8 nucleotides AO353_14585 and AO353_14590 are separated by 159 nucleotides AO353_14590 and AO353_14595 are separated by 150 nucleotides
AO353_14575: AO353_14575 - hypothetical protein, at 3,231,857 to 3,233,134
_14575
AO353_14580: AO353_14580 - energy transducer TonB, at 3,233,353 to 3,234,099
_14580
AO353_14585: AO353_14585 - ribosomal-protein-alanine acetyltransferase, at 3,234,092 to 3,234,544
_14585
AO353_14590: AO353_14590 - serine kinase/phosphatase, at 3,234,704 to 3,235,105
_14590
AO353_14595: AO353_14595 - carbonate dehydratase, at 3,235,256 to 3,235,900
_14595
Position (kb)
3234
3235 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3233.174 kb on + strand at 3233.174 kb on + strand at 3233.174 kb on + strand at 3233.174 kb on + strand at 3233.175 kb on - strand at 3233.175 kb on - strand at 3233.236 kb on + strand at 3233.237 kb on - strand at 3233.273 kb on + strand at 3234.105 kb on + strand at 3234.144 kb on + strand, within AO353_14585 at 3234.158 kb on + strand, within AO353_14585 at 3234.215 kb on + strand, within AO353_14585 at 3234.215 kb on + strand, within AO353_14585 at 3234.216 kb on - strand, within AO353_14585 at 3234.216 kb on - strand, within AO353_14585 at 3234.374 kb on + strand, within AO353_14585 at 3234.374 kb on + strand, within AO353_14585 at 3234.375 kb on - strand, within AO353_14585 at 3234.375 kb on - strand, within AO353_14585 at 3234.440 kb on + strand, within AO353_14585 at 3234.440 kb on + strand, within AO353_14585 at 3234.440 kb on + strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand at 3234.441 kb on - strand, within AO353_14585 at 3234.441 kb on - strand, within AO353_14585 at 3234.482 kb on + strand, within AO353_14585 at 3234.482 kb on + strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.483 kb on - strand, within AO353_14585 at 3234.485 kb on + strand, within AO353_14585 at 3234.601 kb on - strand at 3234.610 kb on + strand at 3234.610 kb on + strand at 3234.610 kb on + strand at 3234.611 kb on - strand at 3234.638 kb on - strand at 3234.932 kb on + strand, within AO353_14590 at 3234.932 kb on + strand, within AO353_14590 at 3234.933 kb on - strand, within AO353_14590 at 3235.084 kb on - strand at 3235.084 kb on - strand at 3235.118 kb on + strand at 3235.118 kb on + strand at 3235.118 kb on + strand at 3235.118 kb on + strand at 3235.119 kb on - strand at 3235.119 kb on - strand at 3235.119 kb on - strand at 3235.119 kb on - strand at 3235.131 kb on + strand at 3235.132 kb on - strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.133 kb on + strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.134 kb on - strand at 3235.156 kb on - strand at 3235.266 kb on + strand at 3235.282 kb on + strand at 3235.283 kb on - strand at 3235.283 kb on - strand at 3235.283 kb on - strand at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.364 kb on + strand, within AO353_14595 at 3235.365 kb on - strand, within AO353_14595 at 3235.365 kb on - strand, within AO353_14595 at 3235.365 kb on - strand, within AO353_14595 at 3235.440 kb on + strand, within AO353_14595 at 3235.440 kb on + strand, within AO353_14595 at 3235.440 kb on + strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.441 kb on - strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.480 kb on + strand, within AO353_14595 at 3235.481 kb on - strand, within AO353_14595 at 3235.481 kb on - strand, within AO353_14595
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 3,233,174 + +0.7 3,233,174 + +1.2 3,233,174 + -0.0 3,233,174 + +1.1 3,233,175 - +0.2 3,233,175 - +3.3 3,233,236 + -0.2 3,233,237 - -0.7 3,233,273 + -2.2 3,234,105 + +0.9 3,234,144 + AO353_14585 0.11 -1.3 3,234,158 + AO353_14585 0.15 +0.8 3,234,215 + AO353_14585 0.27 -0.6 3,234,215 + AO353_14585 0.27 +0.7 3,234,216 - AO353_14585 0.27 -0.9 3,234,216 - AO353_14585 0.27 +0.8 3,234,374 + AO353_14585 0.62 -0.5 3,234,374 + AO353_14585 0.62 +0.4 3,234,375 - AO353_14585 0.62 -0.5 3,234,375 - AO353_14585 0.62 -0.6 3,234,440 + AO353_14585 0.77 -1.5 3,234,440 + AO353_14585 0.77 -0.0 3,234,440 + AO353_14585 0.77 +0.1 3,234,441 - AO353_14585 0.77 -1.5 3,234,441 - AO353_14585 0.77 -1.6 3,234,441 - AO353_14585 0.77 +0.2 3,234,441 - +1.0 3,234,441 - AO353_14585 0.77 -1.2 3,234,441 - AO353_14585 0.77 -0.5 3,234,482 + AO353_14585 0.86 -0.5 3,234,482 + AO353_14585 0.86 -0.0 3,234,483 - AO353_14585 0.86 -0.8 3,234,483 - AO353_14585 0.86 +1.0 3,234,483 - AO353_14585 0.86 +0.8 3,234,483 - AO353_14585 0.86 -0.6 3,234,485 + AO353_14585 0.87 -1.9 3,234,601 - +0.2 3,234,610 + +0.3 3,234,610 + +1.6 3,234,610 + -0.8 3,234,611 - -0.0 3,234,638 - -2.3 3,234,932 + AO353_14590 0.57 +0.7 3,234,932 + AO353_14590 0.57 +0.0 3,234,933 - AO353_14590 0.57 -0.6 3,235,084 - +0.8 3,235,084 - -0.3 3,235,118 + +0.5 3,235,118 + +1.2 3,235,118 + +0.3 3,235,118 + +0.4 3,235,119 - -0.9 3,235,119 - -0.0 3,235,119 - +0.2 3,235,119 - -1.5 3,235,131 + +0.2 3,235,132 - -0.1 3,235,133 + +0.2 3,235,133 + -1.5 3,235,133 + -1.8 3,235,133 + +0.2 3,235,133 + -0.0 3,235,133 + -0.6 3,235,133 + -0.4 3,235,133 + -2.1 3,235,133 + -0.3 3,235,133 + +0.5 3,235,133 + +1.0 3,235,134 - -2.2 3,235,134 - -0.3 3,235,134 - -0.3 3,235,134 - +1.0 3,235,134 - -1.6 3,235,134 - -0.1 3,235,134 - -0.5 3,235,134 - +0.2 3,235,134 - +1.0 3,235,134 - -0.3 3,235,156 - +0.1 3,235,266 + +0.2 3,235,282 + -0.0 3,235,283 - +0.1 3,235,283 - -1.2 3,235,283 - +0.5 3,235,364 + AO353_14595 0.17 +0.1 3,235,364 + AO353_14595 0.17 -0.7 3,235,364 + AO353_14595 0.17 +0.5 3,235,364 + AO353_14595 0.17 -1.2 3,235,364 + AO353_14595 0.17 +1.0 3,235,365 - AO353_14595 0.17 +1.5 3,235,365 - AO353_14595 0.17 -0.8 3,235,365 - AO353_14595 0.17 -0.3 3,235,440 + AO353_14595 0.29 -0.5 3,235,440 + AO353_14595 0.29 +0.2 3,235,440 + AO353_14595 0.29 -0.1 3,235,441 - AO353_14595 0.29 +0.7 3,235,441 - AO353_14595 0.29 -0.8 3,235,441 - AO353_14595 0.29 +0.4 3,235,441 - AO353_14595 0.29 +0.2 3,235,441 - AO353_14595 0.29 -0.6 3,235,441 - AO353_14595 0.29 +0.3 3,235,441 - AO353_14595 0.29 +1.0 3,235,480 + AO353_14595 0.35 +0.7 3,235,480 + AO353_14595 0.35 -0.2 3,235,480 + AO353_14595 0.35 +1.1 3,235,480 + AO353_14595 0.35 +0.2 3,235,480 + AO353_14595 0.35 -1.7 3,235,481 - AO353_14595 0.35 -1.9 3,235,481 - AO353_14595 0.35 +1.2
Or see this region's nucleotide sequence