Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13915 and AO353_13920 are separated by 80 nucleotides AO353_13920 and AO353_13925 are separated by 6 nucleotides AO353_13925 and AO353_13930 are separated by 20 nucleotides AO353_13930 and AO353_13935 are separated by 61 nucleotides
AO353_13915: AO353_13915 - hypothetical protein, at 3,092,545 to 3,093,003
_13915
AO353_13920: AO353_13920 - dihydroxyacetone kinase, at 3,093,084 to 3,093,635
_13920
AO353_13925: AO353_13925 - XRE family transcriptional regulator, at 3,093,642 to 3,093,923
_13925
AO353_13930: AO353_13930 - Killer protein, at 3,093,944 to 3,094,222
_13930
AO353_13935: AO353_13935 - MFS transporter, at 3,094,284 to 3,095,558
_13935
Position (kb)
3093
3094 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3092.695 kb on - strand, within AO353_13915 at 3092.695 kb on - strand, within AO353_13915 at 3092.695 kb on - strand, within AO353_13915 at 3092.695 kb on - strand, within AO353_13915 at 3092.695 kb on - strand, within AO353_13915 at 3092.752 kb on + strand, within AO353_13915 at 3092.752 kb on + strand, within AO353_13915 at 3092.752 kb on + strand, within AO353_13915 at 3092.752 kb on + strand, within AO353_13915 at 3092.753 kb on - strand, within AO353_13915 at 3092.753 kb on - strand, within AO353_13915 at 3092.840 kb on - strand, within AO353_13915 at 3092.840 kb on - strand, within AO353_13915 at 3092.840 kb on - strand, within AO353_13915 at 3092.899 kb on + strand, within AO353_13915 at 3092.899 kb on + strand, within AO353_13915 at 3092.899 kb on + strand, within AO353_13915 at 3092.900 kb on - strand, within AO353_13915 at 3092.900 kb on - strand, within AO353_13915 at 3092.900 kb on - strand, within AO353_13915 at 3092.949 kb on + strand, within AO353_13915 at 3092.949 kb on + strand, within AO353_13915 at 3092.949 kb on + strand, within AO353_13915 at 3092.949 kb on + strand, within AO353_13915 at 3092.949 kb on + strand, within AO353_13915 at 3092.950 kb on - strand, within AO353_13915 at 3092.950 kb on - strand, within AO353_13915 at 3092.950 kb on - strand, within AO353_13915 at 3092.973 kb on + strand at 3092.974 kb on - strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.992 kb on + strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3092.993 kb on - strand at 3093.001 kb on + strand at 3093.001 kb on + strand at 3093.001 kb on + strand at 3093.001 kb on + strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.002 kb on - strand at 3093.051 kb on + strand at 3093.051 kb on + strand at 3093.059 kb on - strand at 3093.092 kb on + strand at 3093.092 kb on + strand at 3093.092 kb on + strand at 3093.093 kb on - strand at 3093.105 kb on - strand at 3093.105 kb on - strand at 3093.105 kb on - strand at 3093.343 kb on + strand, within AO353_13920 at 3093.343 kb on + strand, within AO353_13920 at 3093.343 kb on + strand, within AO353_13920 at 3093.344 kb on - strand, within AO353_13920 at 3093.344 kb on - strand, within AO353_13920 at 3093.344 kb on - strand, within AO353_13920 at 3093.344 kb on - strand, within AO353_13920 at 3093.430 kb on + strand, within AO353_13920 at 3093.431 kb on - strand, within AO353_13920 at 3093.633 kb on + strand at 3093.634 kb on - strand at 3093.707 kb on - strand, within AO353_13925 at 3093.786 kb on - strand, within AO353_13925 at 3093.858 kb on - strand, within AO353_13925 at 3093.858 kb on - strand, within AO353_13925 at 3093.858 kb on - strand, within AO353_13925 at 3093.923 kb on + strand at 3093.923 kb on + strand at 3093.923 kb on + strand at 3093.923 kb on + strand at 3093.923 kb on + strand at 3093.923 kb on + strand at 3093.924 kb on - strand at 3093.924 kb on - strand at 3093.924 kb on - strand at 3093.924 kb on - strand at 3093.924 kb on - strand at 3093.924 kb on - strand at 3093.924 kb on - strand at 3093.951 kb on + strand at 3093.951 kb on + strand at 3093.951 kb on + strand at 3093.951 kb on + strand at 3093.951 kb on + strand at 3093.952 kb on - strand at 3093.952 kb on - strand at 3093.960 kb on + strand at 3093.960 kb on + strand at 3093.961 kb on - strand at 3093.961 kb on - strand at 3094.035 kb on + strand, within AO353_13930 at 3094.035 kb on + strand, within AO353_13930 at 3094.035 kb on + strand, within AO353_13930 at 3094.035 kb on + strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.036 kb on - strand, within AO353_13930 at 3094.182 kb on + strand, within AO353_13930 at 3094.182 kb on + strand at 3094.182 kb on + strand, within AO353_13930 at 3094.182 kb on + strand, within AO353_13930 at 3094.183 kb on - strand, within AO353_13930 at 3094.183 kb on - strand, within AO353_13930 at 3094.183 kb on - strand, within AO353_13930 at 3094.183 kb on - strand, within AO353_13930 at 3094.183 kb on - strand, within AO353_13930 at 3094.183 kb on - strand, within AO353_13930 at 3094.241 kb on + strand at 3094.241 kb on + strand at 3094.253 kb on + strand at 3094.254 kb on - strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.260 kb on + strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.261 kb on - strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.264 kb on + strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.265 kb on - strand at 3094.268 kb on + strand at 3094.269 kb on - strand at 3094.269 kb on - strand at 3094.269 kb on - strand at 3094.269 kb on - strand at 3094.269 kb on - strand at 3094.285 kb on + strand at 3094.285 kb on + strand at 3094.286 kb on - strand at 3094.286 kb on - strand at 3094.286 kb on - strand at 3094.338 kb on + strand at 3094.339 kb on - strand at 3094.339 kb on - strand at 3094.743 kb on + strand, within AO353_13935 at 3094.743 kb on + strand, within AO353_13935 at 3094.743 kb on + strand, within AO353_13935 at 3094.743 kb on + strand, within AO353_13935 at 3094.743 kb on + strand, within AO353_13935 at 3094.743 kb on + strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.744 kb on - strand, within AO353_13935 at 3094.830 kb on + strand, within AO353_13935 at 3094.830 kb on + strand, within AO353_13935 at 3094.864 kb on - strand, within AO353_13935
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 3,092,695 - AO353_13915 0.33 +0.1 3,092,695 - AO353_13915 0.33 +1.6 3,092,695 - AO353_13915 0.33 +0.8 3,092,695 - AO353_13915 0.33 -1.0 3,092,695 - AO353_13915 0.33 -0.0 3,092,752 + AO353_13915 0.45 -0.8 3,092,752 + AO353_13915 0.45 -0.3 3,092,752 + AO353_13915 0.45 +0.8 3,092,752 + AO353_13915 0.45 +0.7 3,092,753 - AO353_13915 0.45 +1.5 3,092,753 - AO353_13915 0.45 -0.3 3,092,840 - AO353_13915 0.64 -1.5 3,092,840 - AO353_13915 0.64 -0.2 3,092,840 - AO353_13915 0.64 +0.3 3,092,899 + AO353_13915 0.77 -0.6 3,092,899 + AO353_13915 0.77 +0.6 3,092,899 + AO353_13915 0.77 +1.4 3,092,900 - AO353_13915 0.77 -1.1 3,092,900 - AO353_13915 0.77 -0.6 3,092,900 - AO353_13915 0.77 -0.2 3,092,949 + AO353_13915 0.88 +0.3 3,092,949 + AO353_13915 0.88 +0.9 3,092,949 + AO353_13915 0.88 +0.8 3,092,949 + AO353_13915 0.88 +0.6 3,092,949 + AO353_13915 0.88 -0.3 3,092,950 - AO353_13915 0.88 -0.1 3,092,950 - AO353_13915 0.88 +0.7 3,092,950 - AO353_13915 0.88 -0.1 3,092,973 + -2.2 3,092,974 - +0.0 3,092,992 + -1.4 3,092,992 + -0.7 3,092,992 + -1.0 3,092,992 + +0.1 3,092,992 + -0.1 3,092,992 + -2.1 3,092,992 + -0.3 3,092,992 + +2.0 3,092,992 + -0.8 3,092,992 + -0.5 3,092,992 + +1.3 3,092,992 + +0.6 3,092,992 + -0.7 3,092,992 + -0.3 3,092,993 - +0.0 3,092,993 - +1.0 3,092,993 - +0.2 3,092,993 - -0.5 3,092,993 - +1.2 3,092,993 - -0.2 3,092,993 - +0.4 3,092,993 - +1.4 3,092,993 - +0.2 3,092,993 - -1.8 3,092,993 - +0.4 3,092,993 - -1.0 3,093,001 + -0.1 3,093,001 + -1.0 3,093,001 + -1.7 3,093,001 + -0.5 3,093,002 - -0.8 3,093,002 - +0.7 3,093,002 - -0.5 3,093,002 - +0.2 3,093,002 - +0.1 3,093,002 - -1.0 3,093,002 - -0.1 3,093,002 - -0.3 3,093,051 + -1.5 3,093,051 + +0.2 3,093,059 - -0.5 3,093,092 + -0.3 3,093,092 + -1.1 3,093,092 + +0.2 3,093,093 - +1.2 3,093,105 - -0.8 3,093,105 - +1.0 3,093,105 - -1.3 3,093,343 + AO353_13920 0.47 +0.4 3,093,343 + AO353_13920 0.47 +0.6 3,093,343 + AO353_13920 0.47 -1.5 3,093,344 - AO353_13920 0.47 +0.0 3,093,344 - AO353_13920 0.47 +1.8 3,093,344 - AO353_13920 0.47 -1.2 3,093,344 - AO353_13920 0.47 +2.3 3,093,430 + AO353_13920 0.63 +0.3 3,093,431 - AO353_13920 0.63 -0.5 3,093,633 + -0.5 3,093,634 - +2.0 3,093,707 - AO353_13925 0.23 +0.2 3,093,786 - AO353_13925 0.51 +0.5 3,093,858 - AO353_13925 0.77 -0.4 3,093,858 - AO353_13925 0.77 -0.8 3,093,858 - AO353_13925 0.77 -1.7 3,093,923 + +0.2 3,093,923 + +0.0 3,093,923 + +0.0 3,093,923 + -0.9 3,093,923 + -1.3 3,093,923 + -0.2 3,093,924 - +0.8 3,093,924 - +0.3 3,093,924 - -0.1 3,093,924 - -1.1 3,093,924 - +1.6 3,093,924 - -0.8 3,093,924 - -0.8 3,093,951 + -0.8 3,093,951 + +0.6 3,093,951 + +0.7 3,093,951 + -0.2 3,093,951 + +0.3 3,093,952 - -0.5 3,093,952 - +0.3 3,093,960 + -1.1 3,093,960 + -0.3 3,093,961 - -1.1 3,093,961 - +0.6 3,094,035 + AO353_13930 0.33 +0.6 3,094,035 + AO353_13930 0.33 +0.5 3,094,035 + AO353_13930 0.33 -0.8 3,094,035 + AO353_13930 0.33 -0.5 3,094,036 - AO353_13930 0.33 -0.1 3,094,036 - AO353_13930 0.33 +0.3 3,094,036 - AO353_13930 0.33 -0.9 3,094,036 - AO353_13930 0.33 +0.3 3,094,036 - AO353_13930 0.33 +0.1 3,094,036 - AO353_13930 0.33 +1.0 3,094,036 - AO353_13930 0.33 +0.9 3,094,036 - AO353_13930 0.33 +1.8 3,094,036 - AO353_13930 0.33 +0.2 3,094,036 - AO353_13930 0.33 +1.5 3,094,182 + AO353_13930 0.85 -0.2 3,094,182 + +1.0 3,094,182 + AO353_13930 0.85 -0.1 3,094,182 + AO353_13930 0.85 -2.5 3,094,183 - AO353_13930 0.86 -0.3 3,094,183 - AO353_13930 0.86 +0.1 3,094,183 - AO353_13930 0.86 +0.9 3,094,183 - AO353_13930 0.86 +2.0 3,094,183 - AO353_13930 0.86 +0.5 3,094,183 - AO353_13930 0.86 -1.7 3,094,241 + -0.3 3,094,241 + -0.7 3,094,253 + +1.2 3,094,254 - -0.1 3,094,260 + -0.7 3,094,260 + -1.5 3,094,260 + -0.2 3,094,260 + -0.3 3,094,260 + -2.1 3,094,260 + -0.6 3,094,260 + +1.3 3,094,260 + -0.1 3,094,260 + +0.6 3,094,261 - +2.4 3,094,261 - -0.3 3,094,261 - +0.8 3,094,261 - -1.3 3,094,261 - +0.5 3,094,261 - -0.3 3,094,261 - -1.3 3,094,261 - -0.2 3,094,261 - +1.6 3,094,261 - -0.4 3,094,261 - +1.1 3,094,264 + -0.3 3,094,264 + -1.1 3,094,264 + +0.8 3,094,264 + +0.2 3,094,264 + -0.5 3,094,264 + +0.9 3,094,264 + -0.3 3,094,264 + -0.5 3,094,264 + -1.0 3,094,264 + +0.8 3,094,264 + -2.1 3,094,264 + -1.8 3,094,264 + +0.7 3,094,264 + -1.0 3,094,264 + -0.5 3,094,264 + -0.4 3,094,264 + -0.2 3,094,264 + +0.4 3,094,264 + -1.3 3,094,264 + -0.6 3,094,264 + -0.7 3,094,264 + -0.8 3,094,264 + +0.2 3,094,264 + -0.9 3,094,264 + +0.5 3,094,264 + -1.0 3,094,264 + -0.2 3,094,264 + -1.1 3,094,264 + +0.5 3,094,264 + +0.3 3,094,264 + -0.4 3,094,265 - +1.0 3,094,265 - +0.7 3,094,265 - +0.7 3,094,265 - +0.8 3,094,265 - -0.2 3,094,265 - -0.5 3,094,265 - -1.1 3,094,265 - -0.5 3,094,265 - +0.0 3,094,265 - +0.3 3,094,265 - +0.2 3,094,265 - -0.2 3,094,265 - +1.0 3,094,265 - +1.5 3,094,265 - +1.6 3,094,265 - -1.7 3,094,265 - +0.9 3,094,265 - -1.9 3,094,265 - +0.3 3,094,265 - -1.2 3,094,265 - -0.5 3,094,265 - -0.8 3,094,265 - +0.0 3,094,265 - -0.7 3,094,265 - +1.5 3,094,265 - +2.0 3,094,265 - -0.7 3,094,268 + +0.5 3,094,269 - -0.6 3,094,269 - -0.8 3,094,269 - +0.7 3,094,269 - -0.7 3,094,269 - -0.7 3,094,285 + +0.4 3,094,285 + -1.1 3,094,286 - -1.7 3,094,286 - +0.2 3,094,286 - -0.1 3,094,338 + +0.7 3,094,339 - +0.7 3,094,339 - -0.7 3,094,743 + AO353_13935 0.36 -0.8 3,094,743 + AO353_13935 0.36 -0.1 3,094,743 + AO353_13935 0.36 -0.5 3,094,743 + AO353_13935 0.36 -1.7 3,094,743 + AO353_13935 0.36 -1.0 3,094,743 + AO353_13935 0.36 +0.5 3,094,744 - AO353_13935 0.36 -1.3 3,094,744 - AO353_13935 0.36 -1.1 3,094,744 - AO353_13935 0.36 +0.2 3,094,744 - AO353_13935 0.36 -0.3 3,094,744 - AO353_13935 0.36 +1.2 3,094,744 - AO353_13935 0.36 +0.5 3,094,744 - AO353_13935 0.36 +0.5 3,094,744 - AO353_13935 0.36 +0.8 3,094,744 - AO353_13935 0.36 -0.3 3,094,744 - AO353_13935 0.36 +0.7 3,094,830 + AO353_13935 0.43 +0.9 3,094,830 + AO353_13935 0.43 +0.2 3,094,864 - AO353_13935 0.45 -0.4
Or see this region's nucleotide sequence