Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11555 and AO353_11560 are separated by 93 nucleotides AO353_11560 and AO353_11565 are separated by 85 nucleotides AO353_11565 and AO353_11570 are separated by 88 nucleotides AO353_11570 and AO353_11575 are separated by 147 nucleotides
AO353_11555: AO353_11555 - sulfate ABC transporter ATP-binding protein, at 2,553,791 to 2,554,780
_11555
AO353_11560: AO353_11560 - hypothetical protein, at 2,554,874 to 2,555,398
_11560
AO353_11565: AO353_11565 - Crp/Fnr family transcriptional regulator, at 2,555,484 to 2,556,170
_11565
AO353_11570: AO353_11570 - transcriptional regulator, at 2,556,259 to 2,556,624
_11570
AO353_11575: AO353_11575 - AraC family transcriptional regulator, at 2,556,772 to 2,557,776
_11575
Position (kb)
2555
2556
2557 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2554.490 kb on + strand, within AO353_11555 at 2554.491 kb on - strand, within AO353_11555 at 2554.608 kb on + strand at 2554.608 kb on + strand at 2554.608 kb on + strand, within AO353_11555 at 2554.608 kb on + strand, within AO353_11555 at 2554.608 kb on + strand, within AO353_11555 at 2554.608 kb on + strand, within AO353_11555 at 2554.609 kb on - strand, within AO353_11555 at 2554.609 kb on - strand, within AO353_11555 at 2554.609 kb on - strand, within AO353_11555 at 2554.609 kb on - strand, within AO353_11555 at 2554.609 kb on - strand, within AO353_11555 at 2554.689 kb on + strand at 2554.689 kb on + strand at 2554.689 kb on + strand at 2554.689 kb on + strand at 2554.689 kb on + strand at 2554.690 kb on - strand at 2554.690 kb on - strand at 2554.690 kb on - strand at 2554.690 kb on - strand at 2554.690 kb on - strand at 2554.690 kb on - strand at 2554.778 kb on + strand at 2554.778 kb on + strand at 2554.779 kb on - strand at 2554.806 kb on + strand at 2554.806 kb on + strand at 2554.806 kb on + strand at 2554.807 kb on - strand at 2554.807 kb on - strand at 2554.807 kb on - strand at 2554.807 kb on - strand at 2554.807 kb on - strand at 2554.807 kb on - strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.814 kb on + strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.815 kb on - strand at 2554.845 kb on + strand at 2554.845 kb on + strand at 2554.845 kb on + strand at 2554.846 kb on - strand at 2554.846 kb on - strand at 2554.846 kb on - strand at 2554.846 kb on - strand at 2554.846 kb on - strand at 2554.875 kb on + strand at 2554.875 kb on + strand at 2554.876 kb on - strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.885 kb on + strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2554.886 kb on - strand at 2555.043 kb on + strand, within AO353_11560 at 2555.116 kb on + strand, within AO353_11560 at 2555.116 kb on + strand, within AO353_11560 at 2555.116 kb on + strand, within AO353_11560 at 2555.116 kb on + strand, within AO353_11560 at 2555.116 kb on + strand, within AO353_11560 at 2555.117 kb on - strand at 2555.117 kb on - strand, within AO353_11560 at 2555.117 kb on - strand, within AO353_11560 at 2555.117 kb on - strand, within AO353_11560 at 2555.117 kb on - strand, within AO353_11560 at 2555.117 kb on - strand, within AO353_11560 at 2555.117 kb on - strand, within AO353_11560 at 2555.189 kb on + strand, within AO353_11560 at 2555.189 kb on + strand, within AO353_11560 at 2555.189 kb on + strand, within AO353_11560 at 2555.189 kb on + strand, within AO353_11560 at 2555.190 kb on - strand, within AO353_11560 at 2555.205 kb on + strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.206 kb on - strand, within AO353_11560 at 2555.231 kb on + strand, within AO353_11560 at 2555.231 kb on + strand, within AO353_11560 at 2555.232 kb on - strand, within AO353_11560 at 2555.367 kb on + strand at 2555.402 kb on + strand at 2555.403 kb on - strand at 2555.413 kb on + strand at 2555.413 kb on + strand at 2555.413 kb on + strand at 2555.414 kb on - strand at 2555.489 kb on + strand at 2555.558 kb on + strand, within AO353_11565 at 2555.558 kb on + strand, within AO353_11565 at 2555.558 kb on + strand, within AO353_11565 at 2555.558 kb on + strand, within AO353_11565 at 2555.559 kb on - strand, within AO353_11565 at 2555.640 kb on + strand, within AO353_11565 at 2555.662 kb on + strand, within AO353_11565 at 2555.704 kb on + strand, within AO353_11565 at 2555.704 kb on + strand, within AO353_11565 at 2555.704 kb on + strand, within AO353_11565 at 2555.705 kb on - strand, within AO353_11565 at 2555.705 kb on - strand, within AO353_11565 at 2555.705 kb on - strand, within AO353_11565 at 2555.778 kb on + strand, within AO353_11565 at 2555.779 kb on - strand, within AO353_11565 at 2555.779 kb on - strand, within AO353_11565 at 2555.809 kb on + strand, within AO353_11565 at 2555.809 kb on + strand, within AO353_11565 at 2555.810 kb on - strand, within AO353_11565 at 2555.810 kb on - strand, within AO353_11565 at 2555.810 kb on - strand, within AO353_11565 at 2555.853 kb on + strand, within AO353_11565 at 2555.853 kb on + strand, within AO353_11565 at 2555.854 kb on - strand, within AO353_11565 at 2555.854 kb on - strand, within AO353_11565 at 2555.854 kb on - strand, within AO353_11565 at 2555.885 kb on + strand, within AO353_11565 at 2555.885 kb on + strand, within AO353_11565 at 2555.885 kb on + strand, within AO353_11565 at 2555.885 kb on + strand, within AO353_11565 at 2555.885 kb on + strand, within AO353_11565 at 2555.885 kb on + strand, within AO353_11565 at 2555.886 kb on - strand, within AO353_11565 at 2555.886 kb on - strand, within AO353_11565 at 2555.886 kb on - strand, within AO353_11565 at 2555.886 kb on - strand, within AO353_11565 at 2555.886 kb on - strand, within AO353_11565 at 2555.979 kb on + strand, within AO353_11565 at 2556.114 kb on + strand at 2556.115 kb on - strand at 2556.115 kb on - strand at 2556.115 kb on - strand at 2556.124 kb on + strand at 2556.124 kb on + strand at 2556.124 kb on + strand at 2556.124 kb on + strand at 2556.124 kb on + strand at 2556.124 kb on + strand at 2556.125 kb on - strand at 2556.125 kb on - strand at 2556.125 kb on - strand at 2556.125 kb on - strand at 2556.191 kb on + strand at 2556.191 kb on + strand at 2556.191 kb on + strand at 2556.191 kb on + strand at 2556.192 kb on - strand at 2556.244 kb on + strand at 2556.244 kb on + strand at 2556.244 kb on + strand at 2556.245 kb on - strand at 2556.245 kb on - strand at 2556.331 kb on + strand, within AO353_11570 at 2556.331 kb on + strand, within AO353_11570 at 2556.331 kb on + strand, within AO353_11570 at 2556.331 kb on + strand, within AO353_11570 at 2556.332 kb on - strand, within AO353_11570 at 2556.332 kb on - strand, within AO353_11570 at 2556.332 kb on - strand, within AO353_11570 at 2556.332 kb on - strand, within AO353_11570 at 2556.344 kb on + strand, within AO353_11570 at 2556.344 kb on + strand, within AO353_11570 at 2556.345 kb on - strand, within AO353_11570 at 2556.345 kb on - strand, within AO353_11570 at 2556.345 kb on - strand, within AO353_11570 at 2556.345 kb on - strand, within AO353_11570 at 2556.345 kb on - strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.391 kb on + strand, within AO353_11570 at 2556.392 kb on - strand, within AO353_11570 at 2556.392 kb on - strand, within AO353_11570 at 2556.392 kb on - strand, within AO353_11570 at 2556.392 kb on - strand, within AO353_11570 at 2556.392 kb on - strand, within AO353_11570 at 2556.547 kb on + strand, within AO353_11570 at 2556.547 kb on + strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.548 kb on - strand, within AO353_11570 at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.866 kb on + strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.867 kb on - strand at 2556.945 kb on + strand, within AO353_11575 at 2556.946 kb on - strand, within AO353_11575 at 2557.018 kb on - strand, within AO353_11575 at 2557.018 kb on - strand, within AO353_11575 at 2557.121 kb on - strand, within AO353_11575
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 2,554,490 + AO353_11555 0.71 -1.4 2,554,491 - AO353_11555 0.71 -0.2 2,554,608 + -0.0 2,554,608 + +1.3 2,554,608 + AO353_11555 0.83 +1.6 2,554,608 + AO353_11555 0.83 -0.3 2,554,608 + AO353_11555 0.83 -0.4 2,554,608 + AO353_11555 0.83 +1.3 2,554,609 - AO353_11555 0.83 -2.9 2,554,609 - AO353_11555 0.83 -0.4 2,554,609 - AO353_11555 0.83 -0.0 2,554,609 - AO353_11555 0.83 -2.2 2,554,609 - AO353_11555 0.83 +0.5 2,554,689 + -0.1 2,554,689 + -0.6 2,554,689 + +1.2 2,554,689 + -1.6 2,554,689 + +0.2 2,554,690 - -0.9 2,554,690 - +0.8 2,554,690 - -1.7 2,554,690 - +1.1 2,554,690 - -0.0 2,554,690 - -0.4 2,554,778 + -0.7 2,554,778 + -0.5 2,554,779 - +0.0 2,554,806 + -0.8 2,554,806 + -0.1 2,554,806 + -0.6 2,554,807 - +0.3 2,554,807 - +1.0 2,554,807 - +0.1 2,554,807 - -0.6 2,554,807 - -1.1 2,554,807 - -0.7 2,554,814 + +0.5 2,554,814 + -0.7 2,554,814 + -0.9 2,554,814 + +0.3 2,554,814 + -0.5 2,554,814 + +0.7 2,554,814 + +0.6 2,554,814 + -0.0 2,554,814 + -0.7 2,554,814 + -0.0 2,554,814 + +0.6 2,554,814 + -1.3 2,554,814 + +0.4 2,554,814 + +1.7 2,554,815 - -0.2 2,554,815 - +0.3 2,554,815 - -0.6 2,554,815 - +0.9 2,554,815 - -0.5 2,554,815 - +0.4 2,554,815 - +0.3 2,554,815 - -0.3 2,554,815 - +2.5 2,554,815 - +1.4 2,554,815 - -0.2 2,554,815 - +0.0 2,554,815 - +1.1 2,554,815 - -0.5 2,554,815 - +1.1 2,554,815 - -0.2 2,554,815 - -1.0 2,554,815 - -0.2 2,554,815 - -0.1 2,554,815 - -0.5 2,554,815 - +2.1 2,554,845 + +0.7 2,554,845 + +1.3 2,554,845 + -0.2 2,554,846 - +0.0 2,554,846 - -0.0 2,554,846 - -0.0 2,554,846 - -0.6 2,554,846 - +0.5 2,554,875 + -1.0 2,554,875 + -0.4 2,554,876 - +0.6 2,554,885 + -1.2 2,554,885 + -0.0 2,554,885 + -0.3 2,554,885 + +0.6 2,554,885 + -0.1 2,554,885 + -0.6 2,554,885 + -0.0 2,554,885 + -0.3 2,554,885 + -1.3 2,554,885 + +1.7 2,554,886 - -0.5 2,554,886 - +0.6 2,554,886 - -0.9 2,554,886 - -0.8 2,554,886 - -0.6 2,554,886 - -0.0 2,554,886 - -0.3 2,554,886 - -0.3 2,554,886 - +0.3 2,555,043 + AO353_11560 0.32 -0.2 2,555,116 + AO353_11560 0.46 +0.7 2,555,116 + AO353_11560 0.46 +1.3 2,555,116 + AO353_11560 0.46 +0.3 2,555,116 + AO353_11560 0.46 -0.3 2,555,116 + AO353_11560 0.46 -0.4 2,555,117 - +1.5 2,555,117 - AO353_11560 0.46 -1.5 2,555,117 - AO353_11560 0.46 +0.1 2,555,117 - AO353_11560 0.46 -1.6 2,555,117 - AO353_11560 0.46 +0.4 2,555,117 - AO353_11560 0.46 +0.3 2,555,117 - AO353_11560 0.46 +0.9 2,555,189 + AO353_11560 0.60 -0.5 2,555,189 + AO353_11560 0.60 +0.4 2,555,189 + AO353_11560 0.60 +0.5 2,555,189 + AO353_11560 0.60 +0.8 2,555,190 - AO353_11560 0.60 +1.1 2,555,205 + AO353_11560 0.63 +0.3 2,555,206 - AO353_11560 0.63 -0.0 2,555,206 - AO353_11560 0.63 -0.5 2,555,206 - AO353_11560 0.63 +1.1 2,555,206 - AO353_11560 0.63 +1.5 2,555,206 - AO353_11560 0.63 -1.1 2,555,206 - AO353_11560 0.63 +0.3 2,555,206 - AO353_11560 0.63 -1.7 2,555,231 + AO353_11560 0.68 -0.9 2,555,231 + AO353_11560 0.68 -0.4 2,555,232 - AO353_11560 0.68 -1.0 2,555,367 + +1.3 2,555,402 + +0.3 2,555,403 - -0.1 2,555,413 + -0.6 2,555,413 + +0.8 2,555,413 + +0.2 2,555,414 - -0.2 2,555,489 + -1.2 2,555,558 + AO353_11565 0.11 +0.5 2,555,558 + AO353_11565 0.11 -0.5 2,555,558 + AO353_11565 0.11 -1.0 2,555,558 + AO353_11565 0.11 -0.1 2,555,559 - AO353_11565 0.11 +0.7 2,555,640 + AO353_11565 0.23 +0.9 2,555,662 + AO353_11565 0.26 -0.6 2,555,704 + AO353_11565 0.32 -0.7 2,555,704 + AO353_11565 0.32 -0.5 2,555,704 + AO353_11565 0.32 -0.2 2,555,705 - AO353_11565 0.32 -0.1 2,555,705 - AO353_11565 0.32 -0.3 2,555,705 - AO353_11565 0.32 +0.8 2,555,778 + AO353_11565 0.43 -0.5 2,555,779 - AO353_11565 0.43 -0.1 2,555,779 - AO353_11565 0.43 +0.2 2,555,809 + AO353_11565 0.47 -0.2 2,555,809 + AO353_11565 0.47 -1.3 2,555,810 - AO353_11565 0.47 -1.3 2,555,810 - AO353_11565 0.47 +2.2 2,555,810 - AO353_11565 0.47 +0.1 2,555,853 + AO353_11565 0.54 -1.3 2,555,853 + AO353_11565 0.54 +0.3 2,555,854 - AO353_11565 0.54 +0.2 2,555,854 - AO353_11565 0.54 -0.2 2,555,854 - AO353_11565 0.54 -0.1 2,555,885 + AO353_11565 0.58 -1.9 2,555,885 + AO353_11565 0.58 +0.5 2,555,885 + AO353_11565 0.58 -0.7 2,555,885 + AO353_11565 0.58 -0.3 2,555,885 + AO353_11565 0.58 +0.5 2,555,885 + AO353_11565 0.58 -0.7 2,555,886 - AO353_11565 0.59 -0.0 2,555,886 - AO353_11565 0.59 +0.5 2,555,886 - AO353_11565 0.59 +1.5 2,555,886 - AO353_11565 0.59 -0.2 2,555,886 - AO353_11565 0.59 -0.8 2,555,979 + AO353_11565 0.72 -1.7 2,556,114 + +1.6 2,556,115 - +1.3 2,556,115 - -1.1 2,556,115 - +1.3 2,556,124 + -1.9 2,556,124 + +0.7 2,556,124 + +1.4 2,556,124 + -1.3 2,556,124 + -0.4 2,556,124 + +0.7 2,556,125 - -1.1 2,556,125 - +0.2 2,556,125 - +1.2 2,556,125 - -1.2 2,556,191 + +0.9 2,556,191 + +1.1 2,556,191 + -0.5 2,556,191 + +0.5 2,556,192 - -1.6 2,556,244 + +0.4 2,556,244 + +2.3 2,556,244 + +0.0 2,556,245 - +0.5 2,556,245 - +0.3 2,556,331 + AO353_11570 0.20 +0.9 2,556,331 + AO353_11570 0.20 +0.3 2,556,331 + AO353_11570 0.20 -1.4 2,556,331 + AO353_11570 0.20 -1.9 2,556,332 - AO353_11570 0.20 -0.5 2,556,332 - AO353_11570 0.20 -0.3 2,556,332 - AO353_11570 0.20 -1.1 2,556,332 - AO353_11570 0.20 +0.1 2,556,344 + AO353_11570 0.23 -0.4 2,556,344 + AO353_11570 0.23 -0.4 2,556,345 - AO353_11570 0.23 -0.2 2,556,345 - AO353_11570 0.23 -1.0 2,556,345 - AO353_11570 0.23 +0.5 2,556,345 - AO353_11570 0.23 -1.0 2,556,345 - AO353_11570 0.23 -0.6 2,556,391 + AO353_11570 0.36 -0.1 2,556,391 + AO353_11570 0.36 -0.9 2,556,391 + AO353_11570 0.36 +0.2 2,556,391 + AO353_11570 0.36 +0.4 2,556,391 + AO353_11570 0.36 -0.4 2,556,391 + AO353_11570 0.36 -1.2 2,556,391 + AO353_11570 0.36 -0.8 2,556,391 + AO353_11570 0.36 +0.8 2,556,391 + AO353_11570 0.36 +0.9 2,556,392 - AO353_11570 0.36 +0.4 2,556,392 - AO353_11570 0.36 +0.1 2,556,392 - AO353_11570 0.36 +2.6 2,556,392 - AO353_11570 0.36 +1.3 2,556,392 - AO353_11570 0.36 -0.5 2,556,547 + AO353_11570 0.79 +1.0 2,556,547 + AO353_11570 0.79 +0.6 2,556,548 - AO353_11570 0.79 -0.7 2,556,548 - AO353_11570 0.79 +0.9 2,556,548 - AO353_11570 0.79 +0.6 2,556,548 - AO353_11570 0.79 +0.7 2,556,548 - AO353_11570 0.79 +0.3 2,556,548 - AO353_11570 0.79 -0.0 2,556,548 - AO353_11570 0.79 +0.1 2,556,548 - AO353_11570 0.79 +0.3 2,556,866 + -0.1 2,556,866 + -0.8 2,556,866 + -1.2 2,556,866 + +0.5 2,556,866 + -0.1 2,556,866 + +1.1 2,556,866 + -0.5 2,556,866 + -0.3 2,556,866 + +0.1 2,556,867 - -1.3 2,556,867 - +1.7 2,556,867 - +0.1 2,556,867 - -0.9 2,556,867 - +0.4 2,556,867 - -1.2 2,556,867 - -1.2 2,556,867 - +1.9 2,556,945 + AO353_11575 0.17 -0.4 2,556,946 - AO353_11575 0.17 +1.3 2,557,018 - AO353_11575 0.24 -0.5 2,557,018 - AO353_11575 0.24 -0.4 2,557,121 - AO353_11575 0.35 -1.8
Or see this region's nucleotide sequence