Experiment: Fusidic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18850 and ABZR86_RS18855 are separated by 1 nucleotides ABZR86_RS18855 and ABZR86_RS18860 overlap by 4 nucleotides ABZR86_RS18860 and ABZR86_RS18865 are separated by 206 nucleotides
ABZR86_RS18850: ABZR86_RS18850 - MlaD family protein, at 199,651 to 200,589
_RS18850
ABZR86_RS18855: ABZR86_RS18855 - ATP-binding cassette domain-containing protein, at 200,591 to 201,403
_RS18855
ABZR86_RS18860: ABZR86_RS18860 - ABC transporter permease, at 201,400 to 202,545
_RS18860
ABZR86_RS18865: ABZR86_RS18865 - sulfate adenylyltransferase subunit CysD, at 202,752 to 203,669
_RS18865
Position (kb) 201
202
203 Strain fitness (log2 ratio) -1
0
1
2 at 200.415 kb on - strand, within ABZR86_RS18850 at 200.472 kb on - strand, within ABZR86_RS18850 at 200.655 kb on + strand at 200.655 kb on + strand at 200.656 kb on - strand at 200.656 kb on - strand at 200.757 kb on + strand, within ABZR86_RS18855 at 200.758 kb on - strand, within ABZR86_RS18855 at 200.758 kb on - strand, within ABZR86_RS18855 at 200.758 kb on - strand, within ABZR86_RS18855 at 200.961 kb on + strand, within ABZR86_RS18855 at 200.961 kb on + strand, within ABZR86_RS18855 at 200.962 kb on - strand, within ABZR86_RS18855 at 201.728 kb on - strand, within ABZR86_RS18860 at 201.927 kb on + strand, within ABZR86_RS18860 at 201.928 kb on - strand, within ABZR86_RS18860 at 201.928 kb on - strand, within ABZR86_RS18860 at 201.929 kb on + strand, within ABZR86_RS18860 at 201.929 kb on + strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 201.930 kb on - strand, within ABZR86_RS18860 at 202.451 kb on + strand at 202.452 kb on - strand at 202.558 kb on + strand at 202.559 kb on - strand at 202.559 kb on - strand at 202.561 kb on - strand at 202.580 kb on - strand at 202.580 kb on - strand at 202.860 kb on + strand, within ABZR86_RS18865 at 202.860 kb on + strand, within ABZR86_RS18865 at 203.090 kb on + strand, within ABZR86_RS18865 at 203.090 kb on + strand, within ABZR86_RS18865 at 203.091 kb on - strand, within ABZR86_RS18865 at 203.136 kb on + strand, within ABZR86_RS18865 at 203.136 kb on + strand, within ABZR86_RS18865 at 203.136 kb on + strand, within ABZR86_RS18865 at 203.137 kb on - strand, within ABZR86_RS18865 at 203.137 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.272 kb on - strand, within ABZR86_RS18865 at 203.309 kb on - strand, within ABZR86_RS18865 at 203.349 kb on + strand, within ABZR86_RS18865 at 203.349 kb on + strand, within ABZR86_RS18865 at 203.386 kb on - strand, within ABZR86_RS18865 at 203.407 kb on + strand, within ABZR86_RS18865 at 203.408 kb on - strand, within ABZR86_RS18865 at 203.408 kb on - strand, within ABZR86_RS18865 at 203.408 kb on - strand, within ABZR86_RS18865 at 203.410 kb on + strand, within ABZR86_RS18865 at 203.411 kb on - strand, within ABZR86_RS18865 at 203.411 kb on - strand, within ABZR86_RS18865
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.2 mg/ml remove 200,415 - ABZR86_RS18850 0.81 -0.2 200,472 - ABZR86_RS18850 0.87 +0.6 200,655 + -0.3 200,655 + -0.7 200,656 - -1.7 200,656 - +0.1 200,757 + ABZR86_RS18855 0.20 +0.4 200,758 - ABZR86_RS18855 0.21 -0.6 200,758 - ABZR86_RS18855 0.21 -0.6 200,758 - ABZR86_RS18855 0.21 +0.5 200,961 + ABZR86_RS18855 0.46 +1.7 200,961 + ABZR86_RS18855 0.46 +0.1 200,962 - ABZR86_RS18855 0.46 -1.3 201,728 - ABZR86_RS18860 0.29 -0.4 201,927 + ABZR86_RS18860 0.46 +0.1 201,928 - ABZR86_RS18860 0.46 -1.2 201,928 - ABZR86_RS18860 0.46 +0.0 201,929 + ABZR86_RS18860 0.46 -0.3 201,929 + ABZR86_RS18860 0.46 -1.3 201,930 - ABZR86_RS18860 0.46 +0.4 201,930 - ABZR86_RS18860 0.46 +0.7 201,930 - ABZR86_RS18860 0.46 +0.0 201,930 - ABZR86_RS18860 0.46 -0.8 201,930 - ABZR86_RS18860 0.46 +0.1 201,930 - ABZR86_RS18860 0.46 -0.1 202,451 + +0.6 202,452 - +0.6 202,558 + -0.6 202,559 - -0.1 202,559 - +0.2 202,561 - -0.7 202,580 - -0.1 202,580 - +0.6 202,860 + ABZR86_RS18865 0.12 +0.4 202,860 + ABZR86_RS18865 0.12 -0.5 203,090 + ABZR86_RS18865 0.37 -0.5 203,090 + ABZR86_RS18865 0.37 +0.7 203,091 - ABZR86_RS18865 0.37 -1.5 203,136 + ABZR86_RS18865 0.42 +1.0 203,136 + ABZR86_RS18865 0.42 -0.2 203,136 + ABZR86_RS18865 0.42 -0.1 203,137 - ABZR86_RS18865 0.42 -0.6 203,137 - ABZR86_RS18865 0.42 +0.4 203,272 - ABZR86_RS18865 0.57 +0.6 203,272 - ABZR86_RS18865 0.57 +0.4 203,272 - ABZR86_RS18865 0.57 +0.2 203,272 - ABZR86_RS18865 0.57 +1.0 203,272 - ABZR86_RS18865 0.57 -0.5 203,309 - ABZR86_RS18865 0.61 +0.9 203,349 + ABZR86_RS18865 0.65 +0.5 203,349 + ABZR86_RS18865 0.65 -1.3 203,386 - ABZR86_RS18865 0.69 -0.3 203,407 + ABZR86_RS18865 0.71 +0.7 203,408 - ABZR86_RS18865 0.71 +1.8 203,408 - ABZR86_RS18865 0.71 -0.5 203,408 - ABZR86_RS18865 0.71 +0.5 203,410 + ABZR86_RS18865 0.72 +0.1 203,411 - ABZR86_RS18865 0.72 -0.2 203,411 - ABZR86_RS18865 0.72 +1.3
Or see this region's nucleotide sequence