Experiment: Fusidic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14680 and ABZR86_RS14685 are separated by 167 nucleotides ABZR86_RS14685 and ABZR86_RS14690 are separated by 22 nucleotides ABZR86_RS14690 and ABZR86_RS14695 are separated by 85 nucleotides ABZR86_RS14695 and ABZR86_RS14700 are separated by 111 nucleotides
ABZR86_RS14680: ABZR86_RS14680 - M4 family metallopeptidase, at 3,287,425 to 3,289,026
_RS14680
ABZR86_RS14685: ABZR86_RS14685 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 3,289,194 to 3,289,844
_RS14685
ABZR86_RS14690: ABZR86_RS14690 - phosphogluconate dehydratase, at 3,289,867 to 3,291,687
_RS14690
ABZR86_RS14695: ABZR86_RS14695 - 6-phosphogluconolactonase, at 3,291,773 to 3,292,486
_RS14695
ABZR86_RS14700: ABZR86_RS14700 - glucose-6-phosphate dehydrogenase, at 3,292,598 to 3,294,067
_RS14700
Position (kb)
3289
3290
3291
3292 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3288.895 kb on + strand at 3288.895 kb on + strand at 3288.896 kb on - strand at 3288.896 kb on - strand at 3288.896 kb on - strand at 3289.078 kb on + strand at 3289.078 kb on + strand at 3289.078 kb on + strand at 3289.079 kb on - strand at 3289.079 kb on - strand at 3289.079 kb on - strand at 3289.079 kb on - strand at 3289.079 kb on - strand at 3289.177 kb on + strand at 3289.190 kb on + strand at 3289.190 kb on + strand at 3289.190 kb on + strand at 3289.190 kb on + strand at 3289.190 kb on + strand at 3289.190 kb on + strand at 3289.191 kb on - strand at 3289.191 kb on - strand at 3290.654 kb on + strand, within ABZR86_RS14690 at 3290.667 kb on - strand, within ABZR86_RS14690 at 3290.835 kb on + strand, within ABZR86_RS14690 at 3290.835 kb on + strand, within ABZR86_RS14690 at 3291.087 kb on - strand, within ABZR86_RS14690 at 3291.227 kb on + strand, within ABZR86_RS14690 at 3291.227 kb on + strand, within ABZR86_RS14690 at 3291.227 kb on + strand, within ABZR86_RS14690 at 3291.228 kb on - strand, within ABZR86_RS14690 at 3291.228 kb on - strand, within ABZR86_RS14690 at 3291.228 kb on - strand, within ABZR86_RS14690 at 3291.425 kb on + strand, within ABZR86_RS14690 at 3291.425 kb on + strand, within ABZR86_RS14690 at 3291.453 kb on + strand, within ABZR86_RS14690 at 3291.455 kb on + strand, within ABZR86_RS14690 at 3291.456 kb on - strand, within ABZR86_RS14690 at 3292.167 kb on + strand, within ABZR86_RS14695 at 3292.539 kb on - strand at 3292.599 kb on + strand at 3292.679 kb on - strand at 3292.680 kb on + strand at 3292.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.2 mg/ml remove 3,288,895 + -1.9 3,288,895 + -1.1 3,288,896 - +0.3 3,288,896 - +0.2 3,288,896 - -0.2 3,289,078 + +0.6 3,289,078 + -0.5 3,289,078 + -1.5 3,289,079 - +0.0 3,289,079 - +0.2 3,289,079 - -0.2 3,289,079 - -0.1 3,289,079 - +0.7 3,289,177 + +0.0 3,289,190 + -0.2 3,289,190 + -0.3 3,289,190 + +0.9 3,289,190 + +0.6 3,289,190 + -2.0 3,289,190 + -1.6 3,289,191 - +0.6 3,289,191 - -0.2 3,290,654 + ABZR86_RS14690 0.43 -1.2 3,290,667 - ABZR86_RS14690 0.44 -0.8 3,290,835 + ABZR86_RS14690 0.53 -2.9 3,290,835 + ABZR86_RS14690 0.53 -1.4 3,291,087 - ABZR86_RS14690 0.67 -1.9 3,291,227 + ABZR86_RS14690 0.75 -2.8 3,291,227 + ABZR86_RS14690 0.75 -1.8 3,291,227 + ABZR86_RS14690 0.75 -1.4 3,291,228 - ABZR86_RS14690 0.75 -1.3 3,291,228 - ABZR86_RS14690 0.75 -0.8 3,291,228 - ABZR86_RS14690 0.75 -0.2 3,291,425 + ABZR86_RS14690 0.86 -2.6 3,291,425 + ABZR86_RS14690 0.86 -2.2 3,291,453 + ABZR86_RS14690 0.87 -0.8 3,291,455 + ABZR86_RS14690 0.87 -0.9 3,291,456 - ABZR86_RS14690 0.87 -3.5 3,292,167 + ABZR86_RS14695 0.55 -0.4 3,292,539 - +0.4 3,292,599 + -0.2 3,292,679 - -0.6 3,292,680 + -0.6 3,292,681 - +1.0
Or see this region's nucleotide sequence