Experiment: Fusidic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14355 and ABZR86_RS14360 overlap by 4 nucleotides ABZR86_RS14360 and ABZR86_RS14365 are separated by 260 nucleotides
ABZR86_RS14355: ABZR86_RS14355 - serine/threonine-protein kinase, at 3,200,386 to 3,202,089
_RS14355
ABZR86_RS14360: ABZR86_RS14360 - FHA domain-containing protein, at 3,202,086 to 3,202,613
_RS14360
ABZR86_RS14365: ABZR86_RS14365 - XVIPCD domain-containing protein, at 3,202,874 to 3,204,259
_RS14365
Position (kb)
3202
3203 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3201.143 kb on + strand, within ABZR86_RS14355 at 3201.143 kb on + strand, within ABZR86_RS14355 at 3201.143 kb on + strand, within ABZR86_RS14355 at 3201.143 kb on + strand, within ABZR86_RS14355 at 3201.260 kb on + strand, within ABZR86_RS14355 at 3201.260 kb on + strand, within ABZR86_RS14355 at 3201.311 kb on + strand, within ABZR86_RS14355 at 3201.311 kb on + strand, within ABZR86_RS14355 at 3201.482 kb on + strand, within ABZR86_RS14355 at 3201.483 kb on - strand, within ABZR86_RS14355 at 3201.557 kb on + strand, within ABZR86_RS14355 at 3201.557 kb on + strand, within ABZR86_RS14355 at 3201.557 kb on + strand, within ABZR86_RS14355 at 3201.557 kb on + strand, within ABZR86_RS14355 at 3201.558 kb on - strand, within ABZR86_RS14355 at 3201.558 kb on - strand, within ABZR86_RS14355 at 3201.558 kb on - strand, within ABZR86_RS14355 at 3201.558 kb on - strand, within ABZR86_RS14355 at 3201.558 kb on - strand, within ABZR86_RS14355 at 3201.713 kb on + strand, within ABZR86_RS14355 at 3201.714 kb on - strand, within ABZR86_RS14355 at 3201.714 kb on - strand, within ABZR86_RS14355 at 3201.714 kb on - strand, within ABZR86_RS14355 at 3201.830 kb on + strand, within ABZR86_RS14355 at 3201.830 kb on + strand, within ABZR86_RS14355 at 3201.830 kb on + strand, within ABZR86_RS14355 at 3201.830 kb on + strand, within ABZR86_RS14355 at 3201.830 kb on + strand, within ABZR86_RS14355 at 3201.830 kb on + strand, within ABZR86_RS14355 at 3201.831 kb on - strand, within ABZR86_RS14355 at 3201.831 kb on - strand, within ABZR86_RS14355 at 3201.831 kb on - strand, within ABZR86_RS14355 at 3201.831 kb on - strand, within ABZR86_RS14355 at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.007 kb on + strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.008 kb on - strand at 3202.318 kb on + strand, within ABZR86_RS14360 at 3202.318 kb on + strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.319 kb on - strand, within ABZR86_RS14360 at 3202.388 kb on + strand, within ABZR86_RS14360 at 3202.388 kb on + strand, within ABZR86_RS14360 at 3202.388 kb on + strand, within ABZR86_RS14360 at 3202.389 kb on - strand, within ABZR86_RS14360 at 3202.559 kb on + strand, within ABZR86_RS14360 at 3202.559 kb on + strand, within ABZR86_RS14360 at 3202.560 kb on - strand, within ABZR86_RS14360 at 3202.646 kb on + strand at 3202.647 kb on - strand at 3202.647 kb on - strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.655 kb on + strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.656 kb on - strand at 3202.719 kb on - strand at 3202.719 kb on - strand at 3202.769 kb on + strand at 3202.770 kb on - strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.806 kb on + strand at 3202.807 kb on - strand at 3203.217 kb on + strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.218 kb on - strand, within ABZR86_RS14365 at 3203.394 kb on + strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.395 kb on - strand, within ABZR86_RS14365 at 3203.436 kb on + strand, within ABZR86_RS14365 at 3203.436 kb on + strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365 at 3203.437 kb on - strand, within ABZR86_RS14365
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.2 mg/ml remove 3,201,143 + ABZR86_RS14355 0.44 -1.7 3,201,143 + ABZR86_RS14355 0.44 +0.0 3,201,143 + ABZR86_RS14355 0.44 -0.3 3,201,143 + ABZR86_RS14355 0.44 -0.6 3,201,260 + ABZR86_RS14355 0.51 +0.5 3,201,260 + ABZR86_RS14355 0.51 +0.1 3,201,311 + ABZR86_RS14355 0.54 -1.1 3,201,311 + ABZR86_RS14355 0.54 -0.9 3,201,482 + ABZR86_RS14355 0.64 +0.3 3,201,483 - ABZR86_RS14355 0.64 -1.0 3,201,557 + ABZR86_RS14355 0.69 -0.6 3,201,557 + ABZR86_RS14355 0.69 +0.9 3,201,557 + ABZR86_RS14355 0.69 -0.6 3,201,557 + ABZR86_RS14355 0.69 +1.1 3,201,558 - ABZR86_RS14355 0.69 -0.3 3,201,558 - ABZR86_RS14355 0.69 -0.8 3,201,558 - ABZR86_RS14355 0.69 +1.6 3,201,558 - ABZR86_RS14355 0.69 +0.0 3,201,558 - ABZR86_RS14355 0.69 +0.4 3,201,713 + ABZR86_RS14355 0.78 +0.7 3,201,714 - ABZR86_RS14355 0.78 -0.1 3,201,714 - ABZR86_RS14355 0.78 -0.2 3,201,714 - ABZR86_RS14355 0.78 +1.1 3,201,830 + ABZR86_RS14355 0.85 +0.5 3,201,830 + ABZR86_RS14355 0.85 -1.1 3,201,830 + ABZR86_RS14355 0.85 -0.1 3,201,830 + ABZR86_RS14355 0.85 -0.3 3,201,830 + ABZR86_RS14355 0.85 -0.2 3,201,830 + ABZR86_RS14355 0.85 -0.3 3,201,831 - ABZR86_RS14355 0.85 -2.0 3,201,831 - ABZR86_RS14355 0.85 -0.1 3,201,831 - ABZR86_RS14355 0.85 +0.6 3,201,831 - ABZR86_RS14355 0.85 -0.0 3,202,007 + +0.2 3,202,007 + -0.3 3,202,007 + +2.3 3,202,007 + +0.2 3,202,007 + -1.0 3,202,008 - -0.7 3,202,008 - -0.3 3,202,008 - +0.0 3,202,008 - +0.5 3,202,008 - +0.1 3,202,008 - -0.2 3,202,318 + ABZR86_RS14360 0.44 -0.3 3,202,318 + ABZR86_RS14360 0.44 -1.4 3,202,319 - ABZR86_RS14360 0.44 -1.8 3,202,319 - ABZR86_RS14360 0.44 -0.4 3,202,319 - ABZR86_RS14360 0.44 +0.3 3,202,319 - ABZR86_RS14360 0.44 +0.3 3,202,319 - ABZR86_RS14360 0.44 +0.3 3,202,319 - ABZR86_RS14360 0.44 +0.0 3,202,388 + ABZR86_RS14360 0.57 -1.4 3,202,388 + ABZR86_RS14360 0.57 -0.1 3,202,388 + ABZR86_RS14360 0.57 +0.3 3,202,389 - ABZR86_RS14360 0.57 +0.7 3,202,559 + ABZR86_RS14360 0.90 -0.5 3,202,559 + ABZR86_RS14360 0.90 -1.8 3,202,560 - ABZR86_RS14360 0.90 +0.4 3,202,646 + +0.3 3,202,647 - +1.5 3,202,647 - -1.5 3,202,655 + +0.3 3,202,655 + +0.4 3,202,655 + +0.3 3,202,655 + +0.3 3,202,655 + -0.7 3,202,655 + +0.5 3,202,655 + +0.8 3,202,655 + -1.2 3,202,655 + -1.2 3,202,655 + +1.2 3,202,655 + -0.4 3,202,655 + -0.9 3,202,655 + +0.7 3,202,655 + -0.1 3,202,655 + +0.4 3,202,655 + +1.4 3,202,655 + +0.9 3,202,655 + -0.3 3,202,655 + +0.6 3,202,655 + -0.5 3,202,655 + +0.4 3,202,655 + -0.5 3,202,655 + +0.2 3,202,656 - +0.6 3,202,656 - -0.2 3,202,656 - -0.1 3,202,656 - +0.1 3,202,656 - +0.6 3,202,656 - +1.5 3,202,656 - -0.6 3,202,656 - +0.1 3,202,656 - -0.3 3,202,656 - +0.0 3,202,656 - -1.1 3,202,656 - +0.3 3,202,656 - -0.1 3,202,656 - +0.2 3,202,656 - -0.4 3,202,656 - -0.6 3,202,656 - +0.7 3,202,656 - +0.2 3,202,656 - -0.1 3,202,656 - -0.2 3,202,656 - -0.1 3,202,656 - -0.9 3,202,656 - -1.0 3,202,656 - +0.7 3,202,656 - -0.8 3,202,656 - +0.1 3,202,656 - +0.6 3,202,719 - -0.6 3,202,719 - +0.1 3,202,769 + -0.5 3,202,770 - +0.0 3,202,806 + -1.7 3,202,806 + -0.3 3,202,806 + +0.8 3,202,806 + +0.1 3,202,806 + -1.0 3,202,806 + +0.3 3,202,806 + -2.8 3,202,807 - -0.9 3,203,217 + ABZR86_RS14365 0.25 -0.4 3,203,218 - ABZR86_RS14365 0.25 +0.7 3,203,218 - ABZR86_RS14365 0.25 +0.1 3,203,218 - ABZR86_RS14365 0.25 +0.1 3,203,218 - ABZR86_RS14365 0.25 +0.2 3,203,218 - ABZR86_RS14365 0.25 +0.2 3,203,218 - ABZR86_RS14365 0.25 -2.5 3,203,394 + ABZR86_RS14365 0.38 -1.4 3,203,395 - ABZR86_RS14365 0.38 -1.8 3,203,395 - ABZR86_RS14365 0.38 -0.1 3,203,395 - ABZR86_RS14365 0.38 -0.2 3,203,395 - ABZR86_RS14365 0.38 -0.7 3,203,436 + ABZR86_RS14365 0.41 -0.6 3,203,436 + ABZR86_RS14365 0.41 -0.7 3,203,437 - ABZR86_RS14365 0.41 -0.3 3,203,437 - ABZR86_RS14365 0.41 -0.2 3,203,437 - ABZR86_RS14365 0.41 +0.1 3,203,437 - ABZR86_RS14365 0.41 +1.3 3,203,437 - ABZR86_RS14365 0.41 +0.1
Or see this region's nucleotide sequence