Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS14285

Experiment: Fusidic 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS14280 and ABZR86_RS14285 are separated by 205 nucleotidesABZR86_RS14285 and ABZR86_RS14290 are separated by 94 nucleotides ABZR86_RS14280: ABZR86_RS14280 - methyltransferase, at 3,178,011 to 3,179,057 _RS14280 ABZR86_RS14285: ABZR86_RS14285 - antibiotic biosynthesis monooxygenase, at 3,179,263 to 3,179,592 _RS14285 ABZR86_RS14290: ABZR86_RS14290 - FAD-dependent monooxygenase, at 3,179,687 to 3,180,913 _RS14290 Position (kb) 3179 3180Strain fitness (log2 ratio) -2 -1 0 1at 3178.278 kb on + strand, within ABZR86_RS14280at 3178.366 kb on - strand, within ABZR86_RS14280at 3178.440 kb on + strand, within ABZR86_RS14280at 3178.441 kb on - strand, within ABZR86_RS14280at 3179.152 kb on - strandat 3179.456 kb on - strand, within ABZR86_RS14285at 3179.458 kb on - strand, within ABZR86_RS14285at 3180.038 kb on + strand, within ABZR86_RS14290at 3180.039 kb on - strand, within ABZR86_RS14290at 3180.353 kb on + strand, within ABZR86_RS14290

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 0.2 mg/ml
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3,178,278 + ABZR86_RS14280 0.26 +0.4
3,178,366 - ABZR86_RS14280 0.34 -0.2
3,178,440 + ABZR86_RS14280 0.41 -0.1
3,178,441 - ABZR86_RS14280 0.41 -0.1
3,179,152 - +0.5
3,179,456 - ABZR86_RS14285 0.58 +0.5
3,179,458 - ABZR86_RS14285 0.59 +0.2
3,180,038 + ABZR86_RS14290 0.29 -2.5
3,180,039 - ABZR86_RS14290 0.29 -0.8
3,180,353 + ABZR86_RS14290 0.54 +0.4

Or see this region's nucleotide sequence