Experiment: Fusidic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02555 and ABZR86_RS02560 overlap by 4 nucleotides ABZR86_RS02560 and ABZR86_RS02565 are separated by 164 nucleotides ABZR86_RS02565 and ABZR86_RS02570 are separated by 164 nucleotides ABZR86_RS02570 and ABZR86_RS02575 are separated by 311 nucleotides
ABZR86_RS02555: ABZR86_RS02555 - hypothetical protein, at 520,732 to 520,923
_RS02555
ABZR86_RS02560: ABZR86_RS02560 - lysozyme, at 520,920 to 521,390
_RS02560
ABZR86_RS02565: ABZR86_RS02565 - lysis system i-spanin subunit Rz, at 521,555 to 521,875
_RS02565
ABZR86_RS02570: ABZR86_RS02570 - HNH endonuclease signature motif containing protein, at 522,040 to 522,324
_RS02570
ABZR86_RS02575: ABZR86_RS02575 - hypothetical protein, at 522,636 to 522,923
_RS02575
Position (kb) 521
522 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 520.659 kb on + strand at 520.659 kb on + strand at 520.659 kb on + strand at 520.667 kb on + strand at 520.710 kb on + strand at 520.711 kb on - strand at 520.843 kb on + strand, within ABZR86_RS02555 at 520.843 kb on + strand, within ABZR86_RS02555 at 520.844 kb on - strand, within ABZR86_RS02555 at 520.844 kb on - strand, within ABZR86_RS02555 at 520.844 kb on - strand, within ABZR86_RS02555 at 520.942 kb on + strand at 520.942 kb on + strand at 520.943 kb on - strand at 521.091 kb on + strand, within ABZR86_RS02560 at 521.092 kb on - strand, within ABZR86_RS02560 at 521.116 kb on + strand, within ABZR86_RS02560 at 521.116 kb on + strand, within ABZR86_RS02560 at 521.117 kb on - strand, within ABZR86_RS02560 at 521.117 kb on - strand, within ABZR86_RS02560 at 521.313 kb on + strand, within ABZR86_RS02560 at 521.313 kb on + strand, within ABZR86_RS02560 at 521.372 kb on - strand at 521.438 kb on + strand at 521.439 kb on - strand at 521.439 kb on - strand at 521.478 kb on + strand at 521.478 kb on + strand at 521.479 kb on - strand at 521.479 kb on - strand at 521.494 kb on + strand at 521.495 kb on - strand at 521.613 kb on - strand, within ABZR86_RS02565 at 521.869 kb on + strand at 521.869 kb on + strand at 521.870 kb on - strand at 521.870 kb on - strand at 521.952 kb on + strand at 521.952 kb on + strand at 521.953 kb on - strand at 521.953 kb on - strand at 521.953 kb on - strand at 521.994 kb on + strand at 521.995 kb on - strand at 522.194 kb on + strand, within ABZR86_RS02570 at 522.194 kb on + strand, within ABZR86_RS02570 at 522.195 kb on - strand, within ABZR86_RS02570 at 522.195 kb on - strand, within ABZR86_RS02570 at 522.344 kb on + strand at 522.376 kb on - strand at 522.376 kb on - strand at 522.401 kb on + strand at 522.402 kb on - strand at 522.467 kb on + strand at 522.729 kb on + strand, within ABZR86_RS02575 at 522.729 kb on + strand, within ABZR86_RS02575 at 522.729 kb on + strand, within ABZR86_RS02575 at 522.730 kb on - strand, within ABZR86_RS02575 at 522.749 kb on + strand, within ABZR86_RS02575 at 522.749 kb on + strand, within ABZR86_RS02575 at 522.834 kb on - strand, within ABZR86_RS02575
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.2 mg/ml remove 520,659 + -0.0 520,659 + -0.5 520,659 + -0.6 520,667 + -0.6 520,710 + -0.8 520,711 - -2.1 520,843 + ABZR86_RS02555 0.58 +0.1 520,843 + ABZR86_RS02555 0.58 -0.3 520,844 - ABZR86_RS02555 0.58 -0.4 520,844 - ABZR86_RS02555 0.58 -1.1 520,844 - ABZR86_RS02555 0.58 -0.5 520,942 + +0.1 520,942 + +0.0 520,943 - +1.0 521,091 + ABZR86_RS02560 0.36 -0.5 521,092 - ABZR86_RS02560 0.37 -0.8 521,116 + ABZR86_RS02560 0.42 +0.7 521,116 + ABZR86_RS02560 0.42 +0.2 521,117 - ABZR86_RS02560 0.42 -0.0 521,117 - ABZR86_RS02560 0.42 -0.8 521,313 + ABZR86_RS02560 0.83 +0.8 521,313 + ABZR86_RS02560 0.83 -0.6 521,372 - -0.9 521,438 + -0.1 521,439 - +0.6 521,439 - +0.1 521,478 + -0.7 521,478 + -1.4 521,479 - +0.7 521,479 - -0.7 521,494 + -0.6 521,495 - -0.1 521,613 - ABZR86_RS02565 0.18 -0.3 521,869 + +0.0 521,869 + -0.1 521,870 - -0.2 521,870 - +0.1 521,952 + -0.6 521,952 + -0.1 521,953 - -0.5 521,953 - +0.2 521,953 - -0.6 521,994 + +0.4 521,995 - +0.1 522,194 + ABZR86_RS02570 0.54 -0.1 522,194 + ABZR86_RS02570 0.54 -0.3 522,195 - ABZR86_RS02570 0.54 -0.1 522,195 - ABZR86_RS02570 0.54 +0.1 522,344 + -0.5 522,376 - +0.3 522,376 - +0.8 522,401 + -0.2 522,402 - +0.0 522,467 + +0.9 522,729 + ABZR86_RS02575 0.32 +0.1 522,729 + ABZR86_RS02575 0.32 -2.9 522,729 + ABZR86_RS02575 0.32 -0.4 522,730 - ABZR86_RS02575 0.33 -0.4 522,749 + ABZR86_RS02575 0.39 +0.8 522,749 + ABZR86_RS02575 0.39 +1.7 522,834 - ABZR86_RS02575 0.69 +0.2
Or see this region's nucleotide sequence