Experiment: Fusidic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00265 and ABZR86_RS00270 are separated by 95 nucleotides ABZR86_RS00270 and ABZR86_RS00275 are separated by 63 nucleotides
ABZR86_RS00265: ABZR86_RS00265 - PD40 domain-containing protein, at 47,231 to 48,214
_RS00265
ABZR86_RS00270: ABZR86_RS00270 - serine hydrolase, at 48,310 to 49,953
_RS00270
ABZR86_RS00275: ABZR86_RS00275 - alpha/beta hydrolase-fold protein, at 50,017 to 51,636
_RS00275
Position (kb) 48
49
50 Strain fitness (log2 ratio) -2
-1
0
1
2 at 47.712 kb on - strand, within ABZR86_RS00265 at 47.712 kb on - strand, within ABZR86_RS00265 at 47.810 kb on + strand, within ABZR86_RS00265 at 47.810 kb on + strand, within ABZR86_RS00265 at 47.939 kb on + strand, within ABZR86_RS00265 at 47.939 kb on + strand, within ABZR86_RS00265 at 47.940 kb on - strand, within ABZR86_RS00265 at 47.940 kb on - strand, within ABZR86_RS00265 at 48.051 kb on - strand, within ABZR86_RS00265 at 48.051 kb on - strand, within ABZR86_RS00265 at 48.051 kb on - strand, within ABZR86_RS00265 at 48.051 kb on - strand, within ABZR86_RS00265 at 48.084 kb on - strand, within ABZR86_RS00265 at 48.277 kb on + strand at 48.278 kb on - strand at 48.278 kb on - strand at 48.278 kb on - strand at 48.466 kb on + strand at 48.466 kb on + strand at 48.467 kb on - strand at 48.597 kb on + strand, within ABZR86_RS00270 at 48.597 kb on + strand, within ABZR86_RS00270 at 48.597 kb on + strand, within ABZR86_RS00270 at 48.598 kb on - strand, within ABZR86_RS00270 at 48.598 kb on - strand, within ABZR86_RS00270 at 48.598 kb on - strand, within ABZR86_RS00270 at 48.598 kb on - strand, within ABZR86_RS00270 at 48.730 kb on + strand, within ABZR86_RS00270 at 48.730 kb on + strand, within ABZR86_RS00270 at 48.731 kb on - strand, within ABZR86_RS00270 at 48.731 kb on - strand, within ABZR86_RS00270 at 48.731 kb on - strand, within ABZR86_RS00270 at 48.809 kb on - strand, within ABZR86_RS00270 at 48.826 kb on + strand, within ABZR86_RS00270 at 48.826 kb on + strand, within ABZR86_RS00270 at 48.827 kb on - strand, within ABZR86_RS00270 at 48.827 kb on - strand, within ABZR86_RS00270 at 48.893 kb on - strand, within ABZR86_RS00270 at 48.893 kb on - strand, within ABZR86_RS00270 at 48.959 kb on - strand, within ABZR86_RS00270 at 48.959 kb on - strand, within ABZR86_RS00270 at 49.028 kb on - strand, within ABZR86_RS00270 at 49.028 kb on - strand, within ABZR86_RS00270 at 49.028 kb on - strand, within ABZR86_RS00270 at 49.138 kb on + strand, within ABZR86_RS00270 at 49.138 kb on + strand, within ABZR86_RS00270 at 49.139 kb on - strand, within ABZR86_RS00270 at 49.489 kb on + strand, within ABZR86_RS00270 at 49.649 kb on - strand, within ABZR86_RS00270 at 50.110 kb on + strand at 50.110 kb on + strand at 50.369 kb on - strand, within ABZR86_RS00275 at 50.405 kb on - strand, within ABZR86_RS00275 at 50.405 kb on - strand, within ABZR86_RS00275 at 50.410 kb on + strand, within ABZR86_RS00275 at 50.410 kb on + strand, within ABZR86_RS00275 at 50.410 kb on + strand, within ABZR86_RS00275 at 50.410 kb on + strand, within ABZR86_RS00275 at 50.410 kb on + strand, within ABZR86_RS00275 at 50.411 kb on - strand, within ABZR86_RS00275 at 50.643 kb on + strand, within ABZR86_RS00275 at 50.644 kb on - strand, within ABZR86_RS00275 at 50.644 kb on - strand, within ABZR86_RS00275 at 50.644 kb on - strand, within ABZR86_RS00275 at 50.710 kb on + strand, within ABZR86_RS00275 at 50.710 kb on + strand, within ABZR86_RS00275 at 50.711 kb on - strand, within ABZR86_RS00275 at 50.711 kb on - strand, within ABZR86_RS00275 at 50.749 kb on + strand, within ABZR86_RS00275 at 50.770 kb on + strand, within ABZR86_RS00275 at 50.770 kb on + strand, within ABZR86_RS00275 at 50.771 kb on - strand, within ABZR86_RS00275 at 50.771 kb on - strand, within ABZR86_RS00275 at 50.771 kb on - strand, within ABZR86_RS00275 at 50.771 kb on - strand, within ABZR86_RS00275 at 50.926 kb on + strand, within ABZR86_RS00275
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.2 mg/ml remove 47,712 - ABZR86_RS00265 0.49 -1.0 47,712 - ABZR86_RS00265 0.49 +0.1 47,810 + ABZR86_RS00265 0.59 +0.3 47,810 + ABZR86_RS00265 0.59 -0.8 47,939 + ABZR86_RS00265 0.72 +0.5 47,939 + ABZR86_RS00265 0.72 -0.9 47,940 - ABZR86_RS00265 0.72 +0.0 47,940 - ABZR86_RS00265 0.72 -0.5 48,051 - ABZR86_RS00265 0.83 +0.2 48,051 - ABZR86_RS00265 0.83 +0.6 48,051 - ABZR86_RS00265 0.83 +0.1 48,051 - ABZR86_RS00265 0.83 -0.2 48,084 - ABZR86_RS00265 0.87 -0.1 48,277 + -0.6 48,278 - +0.4 48,278 - +0.6 48,278 - -0.9 48,466 + -1.0 48,466 + -0.9 48,467 - -0.7 48,597 + ABZR86_RS00270 0.17 +0.3 48,597 + ABZR86_RS00270 0.17 +2.2 48,597 + ABZR86_RS00270 0.17 -0.3 48,598 - ABZR86_RS00270 0.18 +0.5 48,598 - ABZR86_RS00270 0.18 -0.4 48,598 - ABZR86_RS00270 0.18 +0.1 48,598 - ABZR86_RS00270 0.18 -1.2 48,730 + ABZR86_RS00270 0.26 +1.4 48,730 + ABZR86_RS00270 0.26 -0.0 48,731 - ABZR86_RS00270 0.26 -2.6 48,731 - ABZR86_RS00270 0.26 -1.4 48,731 - ABZR86_RS00270 0.26 +1.0 48,809 - ABZR86_RS00270 0.30 +0.1 48,826 + ABZR86_RS00270 0.31 -0.9 48,826 + ABZR86_RS00270 0.31 -1.0 48,827 - ABZR86_RS00270 0.31 +1.0 48,827 - ABZR86_RS00270 0.31 +0.3 48,893 - ABZR86_RS00270 0.35 +0.9 48,893 - ABZR86_RS00270 0.35 +0.7 48,959 - ABZR86_RS00270 0.39 +0.8 48,959 - ABZR86_RS00270 0.39 +0.9 49,028 - ABZR86_RS00270 0.44 +1.4 49,028 - ABZR86_RS00270 0.44 +0.9 49,028 - ABZR86_RS00270 0.44 +0.5 49,138 + ABZR86_RS00270 0.50 +1.2 49,138 + ABZR86_RS00270 0.50 -0.5 49,139 - ABZR86_RS00270 0.50 -0.1 49,489 + ABZR86_RS00270 0.72 -0.5 49,649 - ABZR86_RS00270 0.81 +0.5 50,110 + +0.6 50,110 + +0.2 50,369 - ABZR86_RS00275 0.22 -0.7 50,405 - ABZR86_RS00275 0.24 +0.5 50,405 - ABZR86_RS00275 0.24 +1.2 50,410 + ABZR86_RS00275 0.24 +0.8 50,410 + ABZR86_RS00275 0.24 +0.2 50,410 + ABZR86_RS00275 0.24 -1.1 50,410 + ABZR86_RS00275 0.24 -0.0 50,410 + ABZR86_RS00275 0.24 +0.9 50,411 - ABZR86_RS00275 0.24 +0.3 50,643 + ABZR86_RS00275 0.39 -0.1 50,644 - ABZR86_RS00275 0.39 +0.2 50,644 - ABZR86_RS00275 0.39 -0.0 50,644 - ABZR86_RS00275 0.39 -0.0 50,710 + ABZR86_RS00275 0.43 -0.8 50,710 + ABZR86_RS00275 0.43 -1.1 50,711 - ABZR86_RS00275 0.43 +1.2 50,711 - ABZR86_RS00275 0.43 -0.5 50,749 + ABZR86_RS00275 0.45 +0.5 50,770 + ABZR86_RS00275 0.46 +1.1 50,770 + ABZR86_RS00275 0.46 +1.4 50,771 - ABZR86_RS00275 0.47 +0.2 50,771 - ABZR86_RS00275 0.47 -0.5 50,771 - ABZR86_RS00275 0.47 +0.7 50,771 - ABZR86_RS00275 0.47 -0.3 50,926 + ABZR86_RS00275 0.56 -0.6
Or see this region's nucleotide sequence