Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4715

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
6,189,693	+		BT4714	0.65	-1.5
6,189,728	+		BT4714	0.66	+0.9
6,189,729	-		BT4714	0.67	-1.2
6,189,806	-		BT4714	0.70	+0.9
6,189,881	+		BT4714	0.73	-0.4
6,189,882	-		BT4714	0.73	-2.1
6,189,971	+		BT4714	0.77	+0.1
6,189,972	-		BT4714	0.77	-3.6
6,190,054	-		BT4714	0.81	-0.8
6,190,066	+		BT4714	0.81	-3.6
6,190,095	-		BT4714	0.82	-0.0
6,190,148	-		BT4714	0.85	+1.3
6,190,277	+				-2.0
6,190,308	+				+1.5
6,190,308	+				-1.7
6,190,309	-				-1.3
6,190,464	+				-3.1
6,190,465	-				-2.2
6,190,465	-				+0.2
6,190,517	-				+2.1
6,190,536	-				+1.2
6,190,619	-				-3.1
6,190,621	-				-1.6
6,190,750	+		BT4715	0.30	-1.7
6,190,750	+		BT4715	0.30	+3.5
6,190,757	+		BT4715	0.31	-1.1
6,190,758	-		BT4715	0.32	-1.1
6,190,760	+		BT4715	0.32	-0.5
6,190,790	+		BT4715	0.38	+1.1
6,190,818	-		BT4715	0.44	-1.6
6,190,827	+		BT4715	0.46	-2.0
6,190,911	+		BT4715	0.64	-0.1
6,190,911	+		BT4715	0.64	+0.1
6,190,912	-		BT4715	0.64	-0.6
6,190,960	+		BT4715	0.74	-1.8
6,190,989	+		BT4715	0.80	-1.7
6,190,989	+		BT4715	0.80	+1.0
6,191,033	+		BT4715	0.89	-0.2
6,191,128	+				-0.5
6,191,129	-				-0.3
6,191,241	+				-3.4
6,191,246	-				+0.1
6,191,246	-				+0.1
6,191,246	-				+0.1
6,191,321	+		BT4716	0.11	-0.4
6,191,510	-		BT4716	0.31	-1.7
6,191,522	-		BT4716	0.33	+0.9
6,191,530	-		BT4716	0.33	-2.3
6,191,533	+		BT4716	0.34	+1.7
6,191,584	+		BT4716	0.39	-3.0
6,191,585	-		BT4716	0.39	+0.9
6,191,585	-		BT4716	0.39	-1.4
6,191,613	-		BT4716	0.42	-0.5
6,191,639	+		BT4716	0.45	-1.9
6,191,655	-		BT4716	0.47	-2.3
6,191,722	-		BT4716	0.54	-0.6
6,191,726	-		BT4716	0.55	+0.6
6,191,762	-		BT4716	0.58	-2.6
6,191,797	+		BT4716	0.62	-2.5
6,191,833	+		BT4716	0.66	-3.0
6,191,892	-		BT4716	0.72	-1.8
6,191,915	-		BT4716	0.75	-2.1
6,192,014	+		BT4716	0.86	-1.1
6,192,051	-		BT4716	0.90	+0.4
6,192,073	+				-0.4
6,192,073	+				-2.5