Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4354

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
5,737,149	-				-0.6
5,737,152	+				-0.9
5,737,162	+				-2.4
5,737,220	+				-1.4
5,737,276	-				+1.1
5,737,409	+				-2.3
5,737,415	+				-2.1
5,737,446	+		BT4354	0.10	-1.1
5,737,633	-		BT4354	0.20	-2.7
5,737,766	+		BT4354	0.27	-1.6
5,737,793	+		BT4354	0.28	-1.9
5,737,794	-		BT4354	0.28	-1.3
5,737,795	+		BT4354	0.28	-2.3
5,738,032	+		BT4354	0.41	-1.6
5,738,050	+		BT4354	0.42	+0.3
5,738,172	+		BT4354	0.48	-0.5
5,738,173	-		BT4354	0.48	-0.4
5,738,351	+		BT4354	0.58	-2.3
5,738,416	+		BT4354	0.61	-0.2
5,738,416	+		BT4354	0.61	-3.6
5,738,417	-		BT4354	0.61	-0.2
5,738,418	+		BT4354	0.61	-2.3
5,738,419	-		BT4354	0.61	-1.8
5,738,423	-		BT4354	0.62	-0.5
5,738,439	-		BT4354	0.62	-0.9
5,738,439	-		BT4354	0.62	-1.6
5,738,439	-		BT4354	0.62	-2.6
5,738,482	+		BT4354	0.65	-4.7
5,738,510	-		BT4354	0.66	-0.5
5,738,561	-		BT4354	0.69	-2.3
5,738,601	-		BT4354	0.71	-0.5
5,738,710	-		BT4354	0.77	-2.8
5,738,710	-		BT4354	0.77	-3.1
5,738,783	-		BT4354	0.81	+0.1
5,738,809	+		BT4354	0.82	-0.6
5,738,816	+		BT4354	0.82	-3.1
5,738,817	-		BT4354	0.82	-2.1
5,738,870	-		BT4354	0.85	-0.6
5,739,009	-				+1.0
5,739,116	-				+2.1
5,739,149	+				-0.7
5,739,150	-				-1.5
5,739,157	+				+1.0
5,739,158	-				-0.5
5,739,176	+				+0.6
5,739,177	-				-1.5
5,739,177	-				-3.7
5,739,185	+				-1.5
5,739,191	+				-0.7
5,739,191	+				+0.5
5,739,192	-				-1.5
5,739,195	+				-1.1
5,739,195	+				-2.9
5,739,226	-				-1.9
5,739,228	+				-3.7
5,739,385	+				-0.9
5,739,449	+				-3.7
5,739,479	-				-3.6
5,739,492	+				-1.7
5,739,493	-				-0.6
5,739,493	-				-1.5
5,739,494	+				-1.1
5,739,494	+				-1.5
5,739,494	+				-2.6
5,739,494	+				-1.1
5,739,495	-				-1.8
5,739,504	-				-1.4
5,739,537	+				-1.3
5,739,538	-				-2.3
5,739,538	-				+0.5
5,739,538	-				-1.6
5,739,542	+				-0.6
5,739,575	+				-0.0
5,739,576	-				+1.5
5,739,595	+				-1.8
5,739,671	+		BT4355	0.23	-0.5
5,739,672	-		BT4355	0.23	-0.5
5,739,790	+		BT4355	0.43	-0.7
5,739,791	-		BT4355	0.43	-1.5
5,739,791	-		BT4355	0.43	-3.3
5,739,791	-		BT4355	0.43	-3.1
5,739,791	-		BT4355	0.43	-0.6
5,739,812	+		BT4355	0.47	+1.4
5,739,862	+		BT4355	0.56	-1.0
5,739,947	-		BT4355	0.70	+0.5
5,740,004	+		BT4355	0.80	-2.9
5,740,013	-		BT4355	0.82	-3.2
5,740,013	-		BT4355	0.82	-1.4
5,740,022	+		BT4355	0.84	+1.6
5,740,026	-		BT4355	0.84	+0.5
5,740,026	-		BT4355	0.84	+0.3
5,740,055	-		BT4355	0.89	+0.1
5,740,100	-				-2.6