Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4332

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
5,704,604	-		BT4331	0.23	-1.8
5,704,644	+		BT4331	0.26	-2.5
5,704,669	-		BT4331	0.28	-1.7
5,704,727	+		BT4331	0.33	+2.1
5,704,728	-		BT4331	0.33	-2.9
5,704,778	+		BT4331	0.38	+1.0
5,704,802	-		BT4331	0.40	+0.5
5,704,806	+				+0.5
5,704,806	+		BT4331	0.40	+0.7
5,704,806	+		BT4331	0.40	-3.2
5,704,807	-		BT4331	0.40	-0.0
5,704,807	-		BT4331	0.40	-2.5
5,704,807	-		BT4331	0.40	-3.1
5,704,807	-		BT4331	0.40	-0.5
5,704,827	+		BT4331	0.42	-1.0
5,704,828	-		BT4331	0.42	-0.8
5,704,837	+		BT4331	0.43	-2.9
5,704,837	+		BT4331	0.43	-2.5
5,704,838	-		BT4331	0.43	-2.1
5,704,863	+		BT4331	0.45	-3.1
5,704,864	-		BT4331	0.45	+2.3
5,704,934	+		BT4331	0.51	+2.0
5,704,935	-		BT4331	0.51	-3.1
5,704,966	+		BT4331	0.54	-2.3
5,704,967	-		BT4331	0.54	-1.2
5,704,969	+		BT4331	0.54	+0.6
5,704,970	-		BT4331	0.54	-0.4
5,705,033	-		BT4331	0.59	+1.3
5,705,033	-		BT4331	0.59	+0.9
5,705,033	-		BT4331	0.59	+1.5
5,705,044	+		BT4331	0.60	+0.8
5,705,047	-		BT4331	0.60	+0.5
5,705,049	+		BT4331	0.61	+2.5
5,705,053	+		BT4331	0.61	-2.2
5,705,054	-		BT4331	0.61	-1.5
5,705,054	-		BT4331	0.61	-2.5
5,705,111	+		BT4331	0.66	-2.6
5,705,111	+		BT4331	0.66	+0.9
5,705,112	-		BT4331	0.66	-2.0
5,705,201	+		BT4331	0.74	+0.5
5,705,201	+		BT4331	0.74	+3.0
5,705,202	-		BT4331	0.74	+0.8
5,705,202	-		BT4331	0.74	-2.5
5,705,202	-		BT4331	0.74	-1.7
5,705,202	-		BT4331	0.74	-3.4
5,705,211	+		BT4331	0.74	-1.5
5,705,211	+		BT4331	0.74	+0.7
5,705,212	-		BT4331	0.74	-0.8
5,705,212	-		BT4331	0.74	+0.0
5,705,258	-		BT4331	0.78	-1.8
5,705,258	-		BT4331	0.78	+0.6
5,705,258	-		BT4331	0.78	-2.0
5,705,258	-		BT4331	0.78	+3.1
5,705,263	-		BT4331	0.79	+0.5
5,705,278	+		BT4331	0.80	-2.8
5,705,279	-		BT4331	0.80	-2.2
5,705,279	-		BT4331	0.80	+0.9
5,705,279	-		BT4331	0.80	-1.4
5,705,331	-		BT4331	0.85	+0.1
5,705,331	-		BT4331	0.85	+0.2
5,705,368	+		BT4331	0.88	-2.9
5,705,388	+		BT4331	0.89	+0.6
5,705,388	+		BT4331	0.89	-2.9
5,705,391	-		BT4331	0.90	+0.5
5,705,391	-		BT4331	0.90	+0.9
5,705,391	-		BT4331	0.90	+1.8
5,705,506	+				-2.9
5,705,520	-				-4.7
5,705,527	+				-3.6
5,705,533	-				-1.3
5,705,539	+				+0.7
5,705,539	+				-3.0
5,705,540	-				-1.5
5,705,542	+				-0.7
5,705,543	-				-0.7
5,705,664	+		BT4332	0.15	-2.9
5,705,664	+		BT4332	0.15	+0.8
5,705,723	+		BT4332	0.24	+0.7
5,705,832	+		BT4332	0.41	+0.1
5,705,974	+		BT4332	0.63	-2.0
5,705,975	-		BT4332	0.63	-1.3
5,706,026	+		BT4332	0.71	+0.6
5,706,026	+		BT4332	0.71	-0.5
5,706,026	+		BT4332	0.71	-3.1
5,706,031	+		BT4332	0.71	-0.0
5,706,032	-		BT4332	0.71	+1.0
5,706,107	-		BT4332	0.83	-1.5
5,706,108	-		BT4332	0.83	-2.9
5,706,161	+				-1.7
5,706,182	+				+1.4
5,706,183	-				-1.0
5,706,209	+				-0.8
5,706,226	-				-1.3
5,706,309	+		BT4333	0.13	-0.5
5,706,332	-		BT4333	0.16	+0.9
5,706,376	+		BT4333	0.23	-1.7
5,706,410	+		BT4333	0.28	-4.0
5,706,505	+		BT4333	0.43	-1.0
5,706,517	+		BT4333	0.44	+0.2
5,706,576	+		BT4333	0.53	+1.4
5,706,583	+		BT4333	0.54	-2.0
5,706,606	+		BT4333	0.58	-2.7
5,706,606	+		BT4333	0.58	-0.3
5,706,606	+		BT4333	0.58	-1.5
5,706,606	+		BT4333	0.58	-2.9
5,706,837	-				+3.2
5,706,860	+				-2.8
5,706,910	+				-2.0
5,706,967	+				-2.2