Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3867

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
5,037,845	-		BT3866	0.69	-0.3
5,037,845	-		BT3866	0.69	+0.1
5,037,862	+		BT3866	0.70	-0.8
5,037,888	-		BT3866	0.70	+1.1
5,037,914	-		BT3866	0.71	-0.4
5,037,940	-		BT3866	0.72	-2.1
5,037,945	-				-2.2
5,037,958	+		BT3866	0.73	+0.8
5,037,973	+		BT3866	0.73	-1.9
5,037,989	+		BT3866	0.74	-2.5
5,037,989	+		BT3866	0.74	-1.8
5,038,065	-		BT3866	0.76	-2.2
5,038,077	-		BT3866	0.76	-0.5
5,038,130	-		BT3866	0.78	-1.8
5,038,130	-		BT3866	0.78	-1.1
5,038,130	-		BT3866	0.78	+0.8
5,038,176	-		BT3866	0.79	+0.5
5,038,208	+		BT3866	0.80	+0.1
5,038,233	+		BT3866	0.81	+0.1
5,038,233	+		BT3866	0.81	-3.1
5,038,341	-		BT3866	0.84	-4.1
5,038,361	-		BT3866	0.85	-0.2
5,038,361	-		BT3866	0.85	-0.7
5,038,460	+		BT3866	0.88	-1.2
5,038,460	+		BT3866	0.88	-1.2
5,038,461	-		BT3866	0.88	-1.9
5,038,461	-		BT3866	0.88	-2.6
5,038,497	-		BT3866	0.89	-1.2
5,038,524	+				-2.1
5,038,524	+				-1.7
5,038,524	+				-1.2
5,038,524	+				+1.8
5,038,525	-				-2.4
5,038,567	+				-2.3
5,038,568	-				-0.2
5,038,643	+				-1.1
5,038,733	+				-2.0
5,038,733	+				-1.6
5,038,834	-				-1.4
5,038,835	+				-3.0
5,038,849	+		BT3867	0.14	+0.8
5,038,855	+		BT3867	0.17	-3.0
5,038,856	-		BT3867	0.17	-0.6
5,038,856	-		BT3867	0.17	-1.5
5,038,856	-		BT3867	0.17	-1.2
5,038,858	-		BT3867	0.18	-1.6
5,038,859	+		BT3867	0.18	-1.8
5,038,859	+		BT3867	0.18	-2.9
5,038,860	-		BT3867	0.19	-0.7
5,038,860	-		BT3867	0.19	-1.0
5,038,912	+		BT3867	0.38	+0.6
5,038,917	-		BT3867	0.40	-1.6
5,038,949	+		BT3867	0.52	-2.9
5,038,959	+		BT3867	0.56	+1.7
5,038,970	+		BT3867	0.60	-3.0
5,038,971	-		BT3867	0.61	-2.2
5,038,971	-		BT3867	0.61	-2.4
5,038,994	+		BT3867	0.69	-2.8
5,039,190	+				-1.2
5,039,204	+				-2.0
5,039,205	-				+0.5
5,039,213	+				+0.2
5,039,214	-				+0.2
5,039,216	-				+0.3
5,039,216	-				-3.3
5,039,270	+				-1.9
5,039,277	-				-1.4
5,039,315	+				-3.1
5,039,323	-				+0.8
5,039,334	+				-3.3
5,039,335	-				-0.4
5,039,335	-				+0.3
5,039,349	-				+0.3
5,039,373	+				-2.0
5,039,382	-				-2.7
5,039,518	-				-2.4
5,039,554	+				-3.0
5,039,554	+				-0.6
5,039,555	-				-1.4
5,039,555	-				-3.5
5,039,555	-				-0.4
5,039,580	+				+0.8
5,039,623	+				-2.4
5,039,693	-				-1.3
5,039,699	+				-1.1
5,039,718	-				+0.5
5,039,741	-				+0.4
5,039,746	-				+0.8
5,039,749	-				+1.3
5,039,788	-				-2.4
5,039,791	+				-0.3
5,039,791	+				-0.1
5,039,792	-				+0.8
5,039,795	+				-0.0
5,039,820	+				+0.0
5,039,900	-		BT3868	0.10	-1.0
5,039,936	+		BT3868	0.12	-1.8
5,039,937	-		BT3868	0.12	-0.8
5,039,947	-		BT3868	0.13	-0.5
5,040,002	+		BT3868	0.15	-1.8