Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3673

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
4,764,734	+		BT3672	0.12	-0.8
4,764,784	+		BT3672	0.17	-3.3
4,764,797	-		BT3672	0.18	-0.1
4,764,838	+		BT3672	0.23	+2.0
4,764,840	+		BT3672	0.23	+1.0
4,764,840	+		BT3672	0.23	+1.8
4,764,896	-		BT3672	0.29	+1.7
4,764,926	-		BT3672	0.32	-3.3
4,764,929	+		BT3672	0.32	-2.6
4,764,929	+		BT3672	0.32	-2.2
4,764,929	+		BT3672	0.32	+0.2
4,764,974	-		BT3672	0.37	+1.2
4,765,008	-		BT3672	0.40	-0.9
4,765,076	+		BT3672	0.47	+0.9
4,765,076	+		BT3672	0.47	-0.9
4,765,140	+		BT3672	0.54	-1.0
4,765,140	+		BT3672	0.54	-0.6
4,765,141	-		BT3672	0.54	-1.0
4,765,214	-		BT3672	0.62	-2.4
4,765,268	-		BT3672	0.68	+1.8
4,765,268	-		BT3672	0.68	-3.7
4,765,268	-		BT3672	0.68	-1.6
4,765,271	-		BT3672	0.68	-0.4
4,765,347	+		BT3672	0.76	-1.8
4,765,356	+		BT3672	0.77	-1.4
4,765,455	-		BT3672	0.87	-0.0
4,765,473	-		BT3672	0.89	-0.8
4,765,475	-		BT3672	0.89	+1.0
4,765,500	+				-2.4
4,765,570	-				-1.0
4,765,593	+				-1.8
4,765,594	-				-2.1
4,765,608	+				+0.7
4,765,630	+				-0.6
4,765,658	-				+0.2
4,765,659	+				-0.0
4,765,680	+				-1.6
4,765,685	+				-1.3
4,765,777	+				-1.3
4,765,778	-				-1.2
4,765,859	+		BT3673	0.19	-0.7
4,765,860	-		BT3673	0.19	+0.6
4,765,872	+		BT3673	0.21	-0.5
4,765,873	-		BT3673	0.21	+0.3
4,765,880	-		BT3673	0.22	-0.8
4,765,966	+		BT3673	0.32	+2.2
4,766,090	+		BT3673	0.46	-2.5
4,766,091	-		BT3673	0.46	-0.0
4,766,140	+		BT3673	0.52	-0.5
4,766,182	+		BT3673	0.57	-2.7
4,766,220	+		BT3673	0.62	-2.9
4,766,279	+		BT3673	0.69	-1.3
4,766,280	-		BT3673	0.69	-1.6
4,766,362	-		BT3673	0.78	-1.2
4,766,401	+		BT3673	0.83	+0.2
4,766,444	+		BT3673	0.88	-2.1
4,766,445	-		BT3673	0.88	+0.4
4,766,553	-				+0.1
4,766,553	-				-3.5
4,766,555	+				-1.6
4,766,584	-				+0.4
4,766,593	+				-1.1
4,766,671	+				-2.8
4,766,672	-				-0.3
4,766,760	+				-1.0
4,766,761	-				-2.4
4,766,797	+				+2.6
4,766,798	-				-0.2
4,766,798	-				-0.3
4,766,800	+				-0.9
4,766,801	-				+0.7
4,766,821	-				-2.3
4,766,829	-				-0.3
4,766,833	-				-1.3
4,766,859	+				+1.6
4,766,859	+				-1.4
4,766,860	-				-2.8
4,766,901	+		BT3674	0.11	+0.8
4,766,950	-		BT3674	0.14	-0.7
4,767,058	-		BT3674	0.19	-1.3
4,767,058	-		BT3674	0.19	-0.3
4,767,058	-		BT3674	0.19	-2.1
4,767,061	-		BT3674	0.19	-1.6
4,767,153	+		BT3674	0.24	-0.0
4,767,174	+		BT3674	0.25	-0.3
4,767,212	-		BT3674	0.27	-1.2
4,767,212	-		BT3674	0.27	+1.1
4,767,228	+		BT3674	0.28	+0.2
4,767,228	+		BT3674	0.28	-2.7
4,767,291	+		BT3674	0.31	+0.3
4,767,366	+		BT3674	0.34	-0.0
4,767,400	+		BT3674	0.36	-0.0
4,767,403	-		BT3674	0.36	+0.1
4,767,424	+		BT3674	0.37	-2.5
4,767,424	+		BT3674	0.37	+1.5