Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2967

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
3,737,701	-		BT2966	0.22	+0.5
3,737,705	+		BT2966	0.23	+0.3
3,737,708	+		BT2966	0.23	-1.8
3,737,757	+		BT2966	0.27	-2.7
3,737,801	+		BT2966	0.30	-1.6
3,737,826	+		BT2966	0.32	-2.3
3,737,886	-		BT2966	0.37	-1.6
3,737,906	+		BT2966	0.39	+1.3
3,737,933	+		BT2966	0.41	-0.4
3,737,953	+		BT2966	0.43	-1.2
3,738,000	+		BT2966	0.46	-1.9
3,738,014	-		BT2966	0.48	+1.2
3,738,111	+		BT2966	0.55	-3.6
3,738,122	+		BT2966	0.56	-1.2
3,738,143	-		BT2966	0.58	+0.3
3,738,144	+		BT2966	0.58	+0.8
3,738,193	+		BT2966	0.62	-2.6
3,738,201	-		BT2966	0.62	+0.1
3,738,272	+		BT2966	0.68	-3.4
3,738,284	+		BT2966	0.69	-3.3
3,738,307	-		BT2966	0.71	-1.2
3,738,349	-		BT2966	0.74	-1.2
3,738,418	+		BT2966	0.80	+1.3
3,738,444	+		BT2966	0.82	-2.1
3,738,455	+		BT2966	0.83	+0.7
3,738,456	-		BT2966	0.83	+0.8
3,738,456	-		BT2966	0.83	-0.1
3,738,456	-		BT2966	0.83	+0.7
3,738,457	+		BT2966	0.83	-0.9
3,738,501	-		BT2966	0.87	-0.2
3,738,512	+		BT2966	0.87	-0.6
3,738,569	+				+0.8
3,738,590	+				+0.1
3,738,591	-				-0.8
3,738,591	-				-2.0
3,738,652	+				+0.8
3,738,652	+				-0.9
3,738,652	+				+1.3
3,738,653	-				-0.7
3,738,654	+				+1.0
3,738,713	+				-2.9
3,738,714	-				+1.8
3,738,804	+				-2.8
3,738,903	+		BT2967	0.11	-0.7
3,738,956	+		BT2967	0.14	+0.8
3,738,970	+		BT2967	0.14	-0.4
3,738,975	+		BT2967	0.15	-1.8
3,738,975	+		BT2967	0.15	-0.2
3,738,975	+		BT2967	0.15	+0.2
3,738,975	+		BT2967	0.15	+0.0
3,738,993	+		BT2967	0.15	+0.1
3,738,993	+		BT2967	0.15	-1.9
3,738,993	+		BT2967	0.15	-1.0
3,739,066	+		BT2967	0.19	-3.5
3,739,071	+		BT2967	0.19	-1.7
3,739,104	+		BT2967	0.21	+2.5
3,739,105	-		BT2967	0.21	-2.0
3,739,160	-		BT2967	0.24	-0.2
3,739,194	+		BT2967	0.26	-0.5
3,739,290	+		BT2967	0.31	-0.9
3,739,356	+		BT2967	0.34	-2.1
3,739,357	-		BT2967	0.34	+1.1
3,739,359	+		BT2967	0.34	-1.9
3,739,359	+		BT2967	0.34	-2.1
3,739,359	+		BT2967	0.34	-4.9
3,739,359	+		BT2967	0.34	-0.7
3,739,360	-		BT2967	0.34	+1.0
3,739,404	+		BT2967	0.37	-1.3
3,739,415	-		BT2967	0.37	+1.8
3,739,417	+		BT2967	0.37	-1.0
3,739,429	-		BT2967	0.38	-1.1
3,739,482	+		BT2967	0.41	-1.7
3,739,483	-		BT2967	0.41	-0.8
3,739,496	-		BT2967	0.41	+1.2
3,739,505	+		BT2967	0.42	-1.4
3,739,522	+		BT2967	0.43	+0.7
3,739,527	+		BT2967	0.43	-4.1
3,739,527	+		BT2967	0.43	-1.4
3,739,537	+		BT2967	0.43	-1.4
3,739,585	+		BT2967	0.46	+0.6
3,739,641	+		BT2967	0.49	+1.3
3,739,773	+		BT2967	0.56	-3.7
3,739,778	+		BT2967	0.56	-1.1
3,739,897	+		BT2967	0.62	-1.8
3,739,898	-		BT2967	0.62	-0.7
3,739,911	-		BT2967	0.63	-2.0
3,739,924	+		BT2967	0.63	+0.5
3,739,991	+		BT2967	0.67	+1.2
3,739,992	-		BT2967	0.67	-0.1
3,739,992	-		BT2967	0.67	-0.7
3,740,028	-		BT2967	0.69	-1.5
3,740,131	+		BT2967	0.74	+2.0
3,740,131	+		BT2967	0.74	-1.2
3,740,132	-		BT2967	0.74	-0.0
3,740,135	-		BT2967	0.74	-1.2
3,740,141	+		BT2967	0.74	+0.8
3,740,161	+		BT2967	0.75	+1.7
3,740,205	+		BT2967	0.78	+0.6
3,740,272	+		BT2967	0.81	-0.7
3,740,272	+		BT2967	0.81	+0.5
3,740,272	+		BT2967	0.81	-2.0
3,740,276	+		BT2967	0.81	-0.5
3,740,276	+		BT2967	0.81	-3.4
3,740,278	+		BT2967	0.81	-2.8
3,740,297	-		BT2967	0.82	-0.7
3,740,301	+		BT2967	0.83	-2.4
3,740,301	+		BT2967	0.83	-0.7
3,740,302	-		BT2967	0.83	+1.2
3,740,318	+		BT2967	0.84	-1.5
3,740,318	+		BT2967	0.84	-1.8
3,740,340	+		BT2967	0.85	+0.3
3,740,340	+		BT2967	0.85	-1.9
3,740,341	-		BT2967	0.85	+2.0
3,740,372	+		BT2967	0.86	+0.5
3,740,374	+		BT2967	0.86	+1.3
3,740,375	-		BT2967	0.86	-0.3
3,740,376	+		BT2967	0.86	-2.7
3,740,398	-		BT2967	0.88	+0.3
3,740,398	-		BT2967	0.88	-2.9
3,740,452	+				+0.5
3,740,452	+				-0.6
3,740,481	+				-1.7
3,740,487	+				-1.2
3,740,553	-				-0.2
3,740,591	+				-2.2
3,740,593	+				+0.4
3,740,638	+				-0.5
3,740,665	+				-2.8
3,740,673	+				-2.9
3,740,673	+				-2.7
3,740,763	+				+1.3
3,740,763	+				+1.3
3,740,774	+				-1.9
3,740,774	+				-2.4
3,740,883	+				+0.8
3,740,966	+		BT2968	0.10	-1.7
3,740,970	+		BT2968	0.10	+0.3
3,740,971	-		BT2968	0.10	+1.1
3,740,971	-		BT2968	0.10	-1.3
3,741,051	+		BT2968	0.13	+0.6
3,741,113	+		BT2968	0.15	+0.8
3,741,137	+		BT2968	0.15	-2.1
3,741,190	-		BT2968	0.17	+0.1
3,741,193	+		BT2968	0.17	+0.3
3,741,237	+		BT2968	0.19	-3.0
3,741,237	+		BT2968	0.19	-0.2
3,741,239	+		BT2968	0.19	-1.2
3,741,254	-		BT2968	0.19	+0.2
3,741,305	+		BT2968	0.21	-1.6
3,741,334	+		BT2968	0.22	-1.5
3,741,334	+		BT2968	0.22	-0.1
3,741,362	+		BT2968	0.23	-1.7
3,741,393	+		BT2968	0.24	-0.2
3,741,506	+		BT2968	0.27	+2.6
3,741,506	+		BT2968	0.27	-3.2
3,741,507	-		BT2968	0.27	+0.5
3,741,508	+		BT2968	0.27	+2.3
3,741,508	+		BT2968	0.27	+0.2
3,741,508	+		BT2968	0.27	-0.0
3,741,633	+		BT2968	0.31	-0.2