Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2859

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
3,570,222	-		BT2858	0.50	-1.1
3,570,254	+		BT2858	0.51	+1.4
3,570,255	-		BT2858	0.51	+0.8
3,570,304	+		BT2858	0.54	+2.8
3,570,430	+		BT2858	0.60	-0.4
3,570,431	-		BT2858	0.60	+0.2
3,570,446	+		BT2858	0.61	+1.6
3,570,447	-		BT2858	0.61	+2.6
3,570,449	+		BT2858	0.61	+1.2
3,570,536	+		BT2858	0.66	+0.6
3,570,591	+		BT2858	0.69	+0.2
3,570,598	+		BT2858	0.69	-2.8
3,570,607	-		BT2858	0.69	+2.2
3,570,611	+		BT2858	0.70	-1.3
3,570,694	+		BT2858	0.74	+1.4
3,570,695	-		BT2858	0.74	-1.0
3,570,721	+		BT2858	0.75	+0.8
3,570,721	+		BT2858	0.75	-1.1
3,570,721	+		BT2858	0.75	-0.3
3,570,802	-		BT2858	0.79	+0.0
3,570,841	+		BT2858	0.82	-1.6
3,570,846	+		BT2858	0.82	-0.2
3,570,846	+		BT2858	0.82	+0.4
3,570,847	-		BT2858	0.82	+1.2
3,570,847	-		BT2858	0.82	+1.9
3,570,860	+		BT2858	0.82	-1.3
3,570,861	-		BT2858	0.83	-1.7
3,570,937	+		BT2858	0.86	-2.7
3,570,941	-		BT2858	0.87	-0.5
3,570,977	+		BT2858	0.89	-1.8
3,571,006	+				-1.3
3,571,019	+				+0.5
3,571,027	+				-1.2
3,571,089	+				-3.2
3,571,090	-				+0.2
3,571,099	+				-0.1
3,571,167	-				-1.5
3,571,182	+				-0.1
3,571,182	+				+0.2
3,571,183	-				-3.4
3,571,354	+				-2.1
3,571,355	-				+0.5
3,571,356	+				-0.2
3,571,357	-				-0.9
3,571,358	+				+0.1
3,571,358	+				-0.6
3,571,358	+				-2.5
3,571,497	+				+0.2
3,571,497	+				-3.1
3,571,497	+				+1.1
3,571,571	+		BT2859	0.11	+1.8
3,571,571	+		BT2859	0.11	+0.3
3,571,571	+		BT2859	0.11	+0.7
3,571,728	+		BT2859	0.16	-2.1
3,571,728	+		BT2859	0.16	-4.4
3,571,729	-		BT2859	0.16	+0.3
3,571,812	-		BT2859	0.19	-0.7
3,571,922	+		BT2859	0.23	+1.3
3,571,978	-		BT2859	0.24	-0.7
3,572,022	+		BT2859	0.26	-1.6
3,572,022	+		BT2859	0.26	-2.0
3,572,025	+		BT2859	0.26	-2.2
3,572,044	+		BT2859	0.27	+1.3
3,572,080	+		BT2859	0.28	-0.7
3,572,081	-		BT2859	0.28	-0.7
3,572,081	-		BT2859	0.28	+0.3
3,572,139	+		BT2859	0.30	-0.1
3,572,151	+		BT2859	0.30	-2.5
3,572,152	-		BT2859	0.30	-1.4
3,572,191	-		BT2859	0.31	+0.1
3,572,249	+		BT2859	0.33	-1.1
3,572,330	-		BT2859	0.36	+0.8
3,572,342	+		BT2859	0.36	-0.8
3,572,379	+		BT2859	0.37	+0.0
3,572,393	+		BT2859	0.38	-1.2
3,572,393	+		BT2859	0.38	-2.1
3,572,531	+		BT2859	0.42	-1.1
3,572,553	+		BT2859	0.43	+2.0
3,572,567	+		BT2859	0.43	+1.1
3,572,568	-		BT2859	0.43	+1.1
3,572,572	-		BT2859	0.43	-3.2
3,572,573	+		BT2859	0.43	-2.7
3,572,665	+		BT2859	0.46	-1.2
3,572,708	+		BT2859	0.48	+0.9
3,572,709	-		BT2859	0.48	-0.7
3,572,725	+		BT2859	0.48	+0.8
3,572,725	+		BT2859	0.48	+0.3
3,572,726	-		BT2859	0.48	-2.9
3,572,727	+		BT2859	0.48	-2.2
3,572,727	+		BT2859	0.48	-0.6
3,572,728	-		BT2859	0.48	+2.3
3,572,728	-		BT2859	0.48	+1.3
3,572,745	+		BT2859	0.49	+0.6
3,572,763	+		BT2859	0.50	-3.9
3,572,764	-		BT2859	0.50	+0.1
3,572,774	+		BT2859	0.50	-0.3
3,572,812	-		BT2859	0.51	-1.3
3,572,816	+		BT2859	0.51	+0.8
3,572,852	+		BT2859	0.52	-1.6
3,572,855	+				+1.3
3,572,856	-		BT2859	0.53	+1.2
3,572,907	+		BT2859	0.54	-1.1
3,572,910	-		BT2859	0.54	-0.8
3,572,982	+		BT2859	0.57	-0.1
3,572,982	+		BT2859	0.57	-0.1
3,573,001	-		BT2859	0.57	-1.5
3,573,023	+		BT2859	0.58	-0.2
3,573,035	+		BT2859	0.58	-2.0
3,573,110	+		BT2859	0.61	-2.7
3,573,143	-		BT2859	0.62	-1.7
3,573,143	-		BT2859	0.62	+0.8
3,573,152	+		BT2859	0.62	+0.3
3,573,153	-		BT2859	0.62	-2.6
3,573,212	-		BT2859	0.64	-1.8
3,573,280	-		BT2859	0.66	-1.3
3,573,286	-		BT2859	0.66	-2.5
3,573,351	+		BT2859	0.68	+0.1
3,573,351	+		BT2859	0.68	-0.8
3,573,353	+		BT2859	0.68	-2.5
3,573,355	-		BT2859	0.68	-0.7
3,573,356	+		BT2859	0.68	-1.6
3,573,356	+		BT2859	0.68	-0.3
3,573,356	+		BT2859	0.68	+0.5
3,573,356	+		BT2859	0.68	-3.7
3,573,370	-		BT2859	0.69	+2.3
3,573,370	-		BT2859	0.69	-3.3
3,573,415	-		BT2859	0.70	-1.1
3,573,459	-		BT2859	0.72	-4.1
3,573,459	-		BT2859	0.72	-0.3
3,573,468	+		BT2859	0.72	+1.3
3,573,469	-		BT2859	0.72	+0.3
3,573,488	-		BT2859	0.73	-2.6
3,573,504	-		BT2859	0.73	+2.3
3,573,558	+		BT2859	0.75	-1.0
3,573,625	-		BT2859	0.77	-2.9
3,573,633	+		BT2859	0.77	-2.2
3,573,649	-		BT2859	0.78	-2.0
3,573,673	-		BT2859	0.79	-2.0
3,573,698	+		BT2859	0.79	-2.1
3,573,699	-		BT2859	0.79	-1.5
3,573,715	-		BT2859	0.80	-0.3
3,573,777	+		BT2859	0.82	+0.4
3,573,778	-		BT2859	0.82	-0.5
3,573,861	+		BT2859	0.85	-1.8
3,573,882	+		BT2859	0.85	-1.3
3,573,883	-		BT2859	0.85	+0.1
3,573,909	+		BT2859	0.86	-0.3
3,573,909	+		BT2859	0.86	-1.3
3,573,909	+		BT2859	0.86	+0.5
3,573,909	+		BT2859	0.86	-1.2
3,573,909	+		BT2859	0.86	-0.7
3,573,910	-		BT2859	0.86	-3.1
3,573,910	-		BT2859	0.86	+1.3
3,573,991	-		BT2859	0.89	+1.3
3,573,991	-		BT2859	0.89	-1.6
3,574,045	-				-0.6
3,574,045	-				+0.6
3,574,075	-				-1.5
3,574,075	-				+1.3
3,574,075	-				+1.6
3,574,098	-				+1.8
3,574,098	-				-1.7
3,574,098	-				+1.3
3,574,104	+				+0.5
3,574,104	+				-0.3
3,574,105	-				-1.5
3,574,105	-				+1.6
3,574,107	+				-0.3
3,574,108	-				-3.1
3,574,118	+				+0.6
3,574,183	-				-1.0
3,574,185	+				+0.4
3,574,210	+				-1.7
3,574,304	-				+1.6
3,574,323	+				-0.4
3,574,324	-				+0.6
3,574,343	+				+0.1
3,574,378	+				-0.7
3,574,384	+				+0.3
3,574,448	+				+1.3
3,574,448	+				+1.3
3,574,448	+				+0.3
3,574,449	-				+2.0
3,574,449	-				-2.2
3,574,452	+				-1.7
3,574,452	+				+1.0
3,574,452	+				-0.7
3,574,456	+				-1.9
3,574,456	+				+0.7
3,574,509	+				-0.2
3,574,562	+				+0.3
3,574,562	+				-1.1
3,574,594	-				+0.8
3,574,695	+				+1.6
3,574,701	-				+0.4
3,574,728	-				+1.4
3,574,864	+				+0.2
3,574,878	-				-0.9
3,574,881	+				+0.3
3,574,881	+				-1.1
3,575,006	+		BT2860	0.11	+0.8
3,575,009	-		BT2860	0.11	+1.0
3,575,020	-		BT2860	0.11	+0.3
3,575,020	-		BT2860	0.11	-0.7
3,575,061	+		BT2860	0.12	-0.7
3,575,062	-		BT2860	0.12	-0.5
3,575,066	-		BT2860	0.12	-2.1
3,575,166	+		BT2860	0.15	+0.6
3,575,174	+		BT2860	0.15	-3.2
3,575,316	-		BT2860	0.18	+0.4