Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2693

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
3,354,956	-				-0.5
3,354,959	+		BT2692	0.30	+0.3
3,354,963	-		BT2692	0.30	-1.6
3,355,239	+		BT2692	0.52	-1.7
3,355,240	-		BT2692	0.52	+0.5
3,355,258	+		BT2692	0.54	+1.7
3,355,287	-		BT2692	0.56	-0.5
3,355,299	-		BT2692	0.57	-1.6
3,355,299	-		BT2692	0.57	+0.3
3,355,309	+		BT2692	0.58	+0.1
3,355,309	+		BT2692	0.58	+1.1
3,355,401	-		BT2692	0.65	-0.2
3,355,417	+		BT2692	0.66	-0.1
3,355,490	+		BT2692	0.72	+0.5
3,355,532	-		BT2692	0.76	-1.5
3,355,534	-		BT2692	0.76	-3.0
3,355,645	-		BT2692	0.85	-1.8
3,355,663	-		BT2692	0.86	+0.3
3,355,701	+		BT2692	0.89	-1.2
3,355,702	-		BT2692	0.89	-2.1
3,355,728	-				-1.4
3,355,743	-				-0.0
3,355,818	-				-2.6
3,355,819	+				+0.9
3,355,820	-				-1.4
3,355,839	+				+0.3
3,355,860	+				+1.1
3,355,916	+				+0.2
3,355,921	+				-2.7
3,355,922	-				+2.1
3,355,996	+				-1.4
3,356,010	+				-1.2
3,356,108	-		BT2693	0.19	-2.8
3,356,145	+		BT2693	0.23	-1.2
3,356,145	+		BT2693	0.23	-1.5
3,356,157	-		BT2693	0.25	-1.7
3,356,213	+		BT2693	0.31	-2.2
3,356,277	-		BT2693	0.38	-2.6
3,356,306	+		BT2693	0.41	+1.5
3,356,310	+		BT2693	0.42	+0.7
3,356,474	+		BT2693	0.60	+2.4
3,356,475	-		BT2693	0.60	-0.5
3,356,476	+		BT2693	0.60	-1.5
3,356,476	+		BT2693	0.60	-2.3
3,356,476	+		BT2693	0.60	-1.9
3,356,477	-		BT2693	0.60	+0.1
3,356,537	+		BT2693	0.67	-0.4
3,356,537	+		BT2693	0.67	-0.1
3,356,606	+		BT2693	0.74	+1.1
3,356,607	-		BT2693	0.74	-0.5
3,356,607	-		BT2693	0.74	-1.5
3,356,763	+				-1.2
3,356,763	+				+0.7
3,356,825	+				+0.2
3,356,864	+				-2.3
3,356,926	+				-3.4
3,356,928	+				+1.6
3,356,968	-				-0.5
3,357,049	+				+1.0
3,357,058	+				-0.7
3,357,142	+		BT2694	0.14	+1.8
3,357,207	+		BT2694	0.17	-0.1
3,357,385	+		BT2694	0.26	-0.8
3,357,385	+		BT2694	0.26	-1.6
3,357,425	+		BT2694	0.28	+1.3
3,357,507	+		BT2694	0.32	+0.9
3,357,582	-		BT2694	0.36	-1.6
3,357,593	-		BT2694	0.36	-0.9
3,357,595	-		BT2694	0.37	-1.6
3,357,825	-		BT2694	0.48	-0.2