Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2468

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
3,088,501	+				+0.6
3,088,501	+				-1.9
3,088,502	-				+0.2
3,088,513	-				-1.7
3,088,546	+				+2.5
3,088,547	-				-1.4
3,088,547	-				-1.5
3,088,551	+				+1.0
3,088,568	+		BT2467	0.13	-0.6
3,088,577	+		BT2467	0.16	-0.3
3,088,578	-		BT2467	0.16	-0.5
3,088,578	-		BT2467	0.16	+0.5
3,088,598	-		BT2467	0.21	-1.0
3,088,598	-		BT2467	0.21	-2.0
3,088,669	-		BT2467	0.38	-1.6
3,088,702	+		BT2467	0.46	-1.0
3,088,772	-		BT2467	0.63	+0.1
3,088,779	+		BT2467	0.65	-0.0
3,088,835	+		BT2467	0.78	-1.9
3,088,944	-				-1.4
3,089,128	+				-2.4
3,089,128	+				+2.3
3,089,237	-				-2.2
3,089,301	-				+0.8
3,089,333	+				-1.6
3,089,391	+				-2.6
3,089,392	-				+0.2
3,089,416	+				-1.6
3,089,559	+		BT2468	0.52	-0.6
3,089,606	-		BT2468	0.68	-3.1
3,089,615	-		BT2468	0.71	-1.5
3,089,640	-		BT2468	0.80	-1.5
3,089,640	-		BT2468	0.80	+0.1
3,089,641	+		BT2468	0.80	-1.4
3,089,641	+		BT2468	0.80	-0.5
3,089,675	-				-0.9
3,089,675	-				-0.5
3,089,696	+				-1.8
3,089,696	+				-0.6
3,089,793	+				-0.9
3,089,858	+				+1.7
3,089,859	-				-2.9
3,089,859	-				-0.6
3,089,859	-				-2.7
3,089,864	+				-3.7
3,089,864	+				-0.9
3,089,865	-				-0.3
3,089,874	+				+1.5
3,090,003	+				-0.0
3,090,017	+		BT2469	0.61	+0.5
3,090,017	+		BT2469	0.61	-0.0
3,090,019	+		BT2469	0.62	-3.0
3,090,019	+		BT2469	0.62	+0.5
3,090,020	-		BT2469	0.62	-1.6
3,090,020	-		BT2469	0.62	-3.0
3,090,028	-		BT2469	0.66	-2.9
3,090,069	+		BT2469	0.81	-2.9
3,090,077	+		BT2469	0.84	-1.0
3,090,089	+		BT2469	0.89	-0.0
3,090,089	+		BT2469	0.89	+0.2
3,090,090	-		BT2469	0.89	-1.6
3,090,100	-				+0.2
3,090,136	+				-1.2
3,090,175	+				-3.5
3,090,176	-				-1.9
3,090,177	+				-1.3
3,090,183	+				+0.2
3,090,183	+				+0.3
3,090,183	+				-1.1
3,090,183	+				-3.3
3,090,184	-				+0.8
3,090,185	+				-3.2
3,090,186	-				+0.2
3,090,186	-				+0.5
3,090,187	+				+0.6
3,090,188	-				-2.5
3,090,191	+				+0.4
3,090,192	-				+0.1
3,090,193	+				-1.6
3,090,194	-				-0.0
3,090,194	-				-2.4
3,090,199	+				+1.0
3,090,200	-				+0.5
3,090,202	-				+0.6
3,090,307	-				-1.4
3,090,308	+				-0.9
3,090,309	-				+2.5
3,090,314	+				-0.9
3,090,314	+				+0.2
3,090,316	+				-2.9
3,090,316	+				-0.5
3,090,316	+				-1.2
3,090,450	-				-2.0
3,090,450	-				-0.1
3,090,455	+				+1.5
3,090,456	-				-0.4
3,090,456	-				-1.4
3,090,458	-				-2.1
3,090,458	-				-1.2
3,090,475	+				+1.9
3,090,476	-				-0.9
3,090,500	-				-1.3
3,090,590	-				-1.7
3,090,590	-				+0.9
3,090,592	-				-0.9
3,090,592	-				-0.0
3,090,619	+				-1.1
3,090,627	+				-0.4
3,090,642	+				+0.2
3,090,642	+				+0.8
3,090,642	+				+0.9
3,090,643	-				-4.6
3,090,698	-		BT2470	0.28	-2.2