Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2091

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
2,619,505	-		BT2090	0.64	-1.3
2,619,527	-		BT2090	0.65	+1.7
2,619,527	-		BT2090	0.65	-4.3
2,619,583	+		BT2090	0.67	-4.3
2,619,583	+		BT2090	0.67	-2.5
2,619,584	-		BT2090	0.67	-3.7
2,619,602	-		BT2090	0.68	+1.0
2,619,620	-		BT2090	0.69	-0.6
2,619,649	+		BT2090	0.70	+0.7
2,619,649	+		BT2090	0.70	-2.7
2,619,667	-		BT2090	0.71	-2.8
2,619,670	+		BT2090	0.71	-0.3
2,619,670	+		BT2090	0.71	-0.7
2,619,671	-		BT2090	0.72	+0.1
2,619,672	+		BT2090	0.72	-0.3
2,619,672	+		BT2090	0.72	-1.7
2,619,673	-		BT2090	0.72	-1.7
2,619,673	-		BT2090	0.72	-1.3
2,619,676	+		BT2090	0.72	-2.8
2,619,679	+		BT2090	0.72	-1.4
2,619,766	+		BT2090	0.76	+0.3
2,619,768	+		BT2090	0.76	+0.8
2,619,768	+		BT2090	0.76	-1.3
2,619,768	+		BT2090	0.76	-1.9
2,619,769	-		BT2090	0.76	-1.6
2,619,808	+		BT2090	0.78	-2.8
2,619,878	+		BT2090	0.81	-0.3
2,619,879	-		BT2090	0.81	+0.2
2,620,035	+		BT2090	0.88	-2.7
2,620,251	+				+0.7
2,620,253	+				-1.3
2,620,253	+				-2.2
2,620,254	-				-1.2
2,620,254	-				-1.9
2,620,254	-				-0.9
2,620,286	-				-2.7
2,620,326	+				-0.3
2,620,327	-				-1.2
2,620,406	+				-1.2
2,620,413	-				-3.0
2,620,485	+		BT2091	0.11	-3.1
2,620,485	+		BT2091	0.11	-1.9
2,620,486	-		BT2091	0.11	-1.3
2,620,594	+		BT2091	0.16	-4.0
2,620,625	+		BT2091	0.18	-3.0
2,620,683	+		BT2091	0.21	-2.2
2,620,684	-		BT2091	0.21	-0.7
2,621,004	-		BT2091	0.38	-1.0
2,621,186	+		BT2091	0.47	-3.3
2,621,220	-		BT2091	0.49	-2.8
2,621,352	-		BT2091	0.56	+0.7
2,621,352	-		BT2091	0.56	-0.9
2,621,445	-		BT2091	0.61	-2.7
2,621,470	+		BT2091	0.62	-0.3
2,621,557	-		BT2091	0.67	+0.1
2,621,564	-		BT2091	0.67	-0.7
2,621,759	+		BT2091	0.78	-0.9
2,621,760	-		BT2091	0.78	-2.8
2,621,760	-		BT2091	0.78	-3.5
2,621,776	-		BT2091	0.78	-2.2
2,621,776	-		BT2091	0.78	+0.7
2,621,841	+		BT2091	0.82	-2.3
2,622,272	+				-1.3
2,622,273	-				+1.2
2,622,277	-				+2.4
2,622,356	-				-0.4
2,622,387	-				+1.4
2,622,430	-				+1.9
2,622,449	-				+0.8
2,622,493	+				-1.4
2,622,499	+				-2.4
2,622,536	+				-0.4
2,622,557	-				+0.1
2,622,592	-				+0.5
2,622,658	+				-3.6
2,622,659	-				+1.0
2,622,697	+		BT2092	0.12	+1.4
2,622,823	+		BT2092	0.19	+0.4
2,622,823	+		BT2092	0.19	+1.1
2,622,855	+				+0.6
2,622,895	+		BT2092	0.23	+1.1
2,622,896	-		BT2092	0.24	-1.6
2,622,900	-		BT2092	0.24	-2.6
2,622,970	-		BT2092	0.28	+1.1
2,623,029	-		BT2092	0.32	+0.8
2,623,040	+		BT2092	0.32	-0.9
2,623,041	-		BT2092	0.32	+0.5
2,623,041	-		BT2092	0.32	+1.4
2,623,041	-		BT2092	0.32	+0.7
2,623,045	+		BT2092	0.32	+0.6
2,623,045	+		BT2092	0.32	-0.7
2,623,045	+		BT2092	0.32	-1.7
2,623,046	-		BT2092	0.33	+0.3
2,623,046	-		BT2092	0.33	+0.1