Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2057

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
2,575,553	-	tRNA-Ser	BT_t34	0.47	-0.6
2,575,681	-				-3.3
2,575,681	-				+1.7
2,575,699	+				+2.4
2,575,818	+		BT2056	0.13	-2.5
2,575,819	-		BT2056	0.13	+2.0
2,576,079	+		BT2056	0.46	-0.9
2,576,082	-		BT2056	0.47	-0.2
2,576,083	+		BT2056	0.47	-1.5
2,576,083	+		BT2056	0.47	+0.1
2,576,083	+		BT2056	0.47	+0.4
2,576,085	+		BT2056	0.47	+1.2
2,576,087	+		BT2056	0.47	+1.4
2,576,127	+		BT2056	0.52	+0.1
2,576,127	+		BT2056	0.52	-0.1
2,576,227	+		BT2056	0.65	-1.5
2,576,235	+		BT2056	0.66	+0.6
2,576,236	-		BT2056	0.66	-1.6
2,576,301	+		BT2056	0.75	+0.1
2,576,394	+		BT2056	0.87	-0.5
2,576,400	+		BT2056	0.88	+0.4
2,576,484	+				-1.2
2,576,484	+				-0.3
2,576,488	+				+0.6
2,576,489	-				+0.1
2,576,539	+				-1.5
2,576,543	-				-2.4
2,576,719	+		BT2057	0.32	+2.8
2,576,719	+		BT2057	0.32	+1.5
2,576,740	+		BT2057	0.35	-1.9
2,576,752	-		BT2057	0.37	-0.1
2,576,773	+		BT2057	0.39	+1.1
2,576,893	+		BT2057	0.56	+0.4
2,576,947	-		BT2057	0.64	-0.4
2,576,947	-		BT2057	0.64	+0.3
2,576,966	+		BT2057	0.66	+1.3
2,576,968	+		BT2057	0.67	-1.9
2,576,968	+		BT2057	0.67	-0.5
2,576,968	+		BT2057	0.67	+1.3
2,576,969	-		BT2057	0.67	+1.9
2,577,038	+		BT2057	0.76	+0.2
2,577,125	+		BT2057	0.89	+1.4
2,577,128	-		BT2057	0.89	-1.3
2,577,165	+				+1.6
2,577,200	-				-0.3