Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1697

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
2,094,699	-		BT1696	0.19	-0.9
2,094,806	+		BT1696	0.28	-1.1
2,094,806	+		BT1696	0.28	-0.5
2,094,807	-		BT1696	0.28	-3.0
2,094,821	+		BT1696	0.29	-2.5
2,094,881	+		BT1696	0.34	-0.6
2,094,910	-		BT1696	0.36	-0.7
2,094,934	-		BT1696	0.38	-1.8
2,094,948	+		BT1696	0.39	+0.3
2,094,973	-		BT1696	0.41	-1.7
2,095,007	-		BT1696	0.44	+0.6
2,095,049	+		BT1696	0.47	-0.8
2,095,049	+		BT1696	0.47	-0.0
2,095,050	-		BT1696	0.48	-0.5
2,095,052	+		BT1696	0.48	+0.5
2,095,100	+		BT1696	0.52	-0.9
2,095,101	-		BT1696	0.52	-1.4
2,095,102	+		BT1696	0.52	-2.4
2,095,102	+		BT1696	0.52	-1.6
2,095,103	-		BT1696	0.52	-1.4
2,095,103	-		BT1696	0.52	-1.4
2,095,266	+		BT1696	0.65	-2.6
2,095,385	+		BT1696	0.75	-0.6
2,095,386	-		BT1696	0.75	-1.4
2,095,387	+		BT1696	0.75	-2.2
2,095,387	+		BT1696	0.75	+0.3
2,095,467	+		BT1696	0.81	+0.8
2,095,479	-		BT1696	0.82	-0.4
2,095,498	-		BT1696	0.84	-0.4
2,095,574	-				-0.2
2,095,583	+				+0.8
2,095,595	-				+1.0
2,095,618	+				-1.5
2,095,618	+				-1.7
2,095,619	-				+0.5
2,095,649	+				-1.9
2,095,674	+				-3.0
2,095,674	+				+1.3
2,095,675	-				-1.4
2,095,703	+				+0.4
2,095,703	+				-2.0
2,095,715	+				+0.6
2,095,757	-				+2.3
2,095,819	-				-3.6
2,095,980	+		BT1697	0.15	+0.3
2,096,018	+		BT1697	0.18	-2.1
2,096,124	+		BT1697	0.23	-1.7
2,096,254	+		BT1697	0.30	-2.3
2,096,254	+		BT1697	0.30	-3.0
2,096,269	+		BT1697	0.31	-2.6
2,096,356	+				+0.6
2,096,451	-		BT1697	0.41	-0.9
2,096,480	+		BT1697	0.43	-0.6
2,096,485	-		BT1697	0.43	-1.0
2,096,542	+		BT1697	0.46	-0.9
2,096,557	-		BT1697	0.47	-1.1
2,096,557	-		BT1697	0.47	-2.4
2,096,672	-				-1.6
2,096,674	-		BT1697	0.53	+0.0
2,096,674	-		BT1697	0.53	-0.4
2,096,674	-		BT1697	0.53	-2.4
2,096,674	-		BT1697	0.53	-2.7
2,096,784	-		BT1697	0.59	-0.8
2,096,844	+		BT1697	0.63	+0.1
2,096,845	-		BT1697	0.63	+1.0
2,096,908	+		BT1697	0.66	-2.1
2,096,913	+		BT1697	0.66	-1.5
2,096,947	+		BT1697	0.68	-2.2
2,097,031	+		BT1697	0.73	-0.4
2,097,036	+		BT1697	0.73	-3.0
2,097,057	+		BT1697	0.74	-1.7
2,097,058	-		BT1697	0.74	-0.1
2,097,155	+		BT1697	0.80	+0.3
2,097,155	+		BT1697	0.80	-1.6
2,097,178	+		BT1697	0.81	-1.4
2,097,293	+		BT1697	0.87	+0.4
2,097,462	-				-1.5
2,097,462	-				-1.8
2,097,465	+				-0.7
2,097,534	+				+1.2
2,097,534	+				-1.4
2,097,540	-				-2.6
2,097,542	-				-1.8
2,097,542	-				-1.3
2,097,575	+				-1.0
2,097,620	+		BT1698	0.25	-1.7
2,097,630	+		BT1698	0.29	+0.6
2,097,631	-		BT1698	0.29	+0.2
2,097,632	+		BT1698	0.30	-0.1
2,097,716	+		BT1698	0.62	-0.1
2,097,817	+				-1.8
2,097,825	+				+1.6
2,097,920	+				+0.4
2,097,961	+				-0.2
2,098,037	+				-0.2
2,098,073	-				-2.0
2,098,083	-				+0.7
2,098,235	-		BT1699	0.40	+1.2
2,098,273	+		BT1699	0.51	+0.6
2,098,307	-		BT1699	0.61	-1.4
2,098,326	+		BT1699	0.66	-1.2
2,098,327	-		BT1699	0.66	-0.3
2,098,352	-		BT1699	0.73	-0.0
2,098,381	-		BT1699	0.81	-2.1
2,098,404	-		BT1699	0.88	+0.2
2,098,520	-				-1.0