Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1676

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
2,069,254	+		BT1675	0.67	-1.0
2,069,587	+		BT1675	0.82	-1.0
2,069,798	+				-2.2
2,070,030	-				-3.4
2,070,031	+				+1.6
2,070,034	+				+0.4
2,070,035	-				+1.8
2,070,035	-				-2.8
2,070,052	+		BT1676	0.12	-1.2
2,070,060	-		BT1676	0.14	-2.3
2,070,067	+		BT1676	0.15	-3.2
2,070,067	+		BT1676	0.15	-3.7
2,070,069	+		BT1676	0.15	-0.8
2,070,070	-		BT1676	0.15	-1.8
2,070,121	-		BT1676	0.24	-0.4
2,070,132	+		BT1676	0.26	-0.9
2,070,188	-		BT1676	0.36	-1.6
2,070,188	-		BT1676	0.36	-2.0
2,070,214	+		BT1676	0.40	+0.6
2,070,331	+		BT1676	0.60	-2.7
2,070,403	-		BT1676	0.73	-1.9
2,070,474	+		BT1676	0.85	-1.7
2,070,475	-		BT1676	0.85	-1.2
2,070,531	-				-2.3
2,070,531	-				-1.4
2,070,532	+				-1.0
2,070,533	-				-1.6
2,070,576	-				+0.4
2,070,587	+				-0.4