Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1541

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
1,899,431	-		BT1539	0.83	-4.2
1,899,435	-		BT1539	0.84	-1.2
1,899,596	+		BT1540	0.11	-0.6
1,899,604	+		BT1540	0.12	-1.2
1,899,657	+		BT1540	0.18	+0.7
1,899,657	+		BT1540	0.18	-2.4
1,899,658	-		BT1540	0.18	+0.7
1,899,729	-		BT1540	0.27	-1.4
1,900,037	+		BT1540	0.64	-1.2
1,900,047	+		BT1540	0.65	+1.0
1,900,086	-		BT1540	0.69	-1.9
1,900,141	+		BT1540	0.76	-0.6
1,900,216	+		BT1540	0.85	+1.2
1,900,308	+				+0.7
1,900,343	+				-0.6
1,900,496	+		BT1541	0.11	+0.0
1,900,513	+		BT1541	0.14	-0.2
1,900,704	+		BT1541	0.47	+6.5
1,900,723	+		BT1541	0.50	-1.7
1,900,793	-		BT1541	0.62	+0.3
1,900,827	-		BT1541	0.68	+0.6
1,900,827	-		BT1541	0.68	+1.0
1,901,062	+				+0.8
1,901,063	-				+0.9
1,901,063	-				+1.3
1,901,084	-				-1.9
1,901,125	+				+0.3
1,901,125	+				+0.5
1,901,125	+				-2.6
1,901,136	+				+2.6
1,901,139	+				-2.7
1,901,252	+				-0.2
1,901,260	-		BT1542	0.10	-3.2
1,901,308	+		BT1542	0.14	-2.6
1,901,326	-		BT1542	0.15	-1.9
1,901,334	+		BT1542	0.16	-1.2
1,901,335	-		BT1542	0.16	-4.6
1,901,341	+		BT1542	0.16	-0.6
1,901,342	-		BT1542	0.16	+1.3
1,901,342	-		BT1542	0.16	-2.6
1,901,434	+		BT1542	0.23	+0.4
1,901,435	-		BT1542	0.23	-0.3
1,901,443	-		BT1542	0.24	-0.8
1,901,556	+		BT1542	0.32	+0.7
1,901,556	+		BT1542	0.32	-1.5
1,901,558	+		BT1542	0.32	-3.2
1,901,558	+		BT1542	0.32	-2.0
1,901,559	-		BT1542	0.32	-5.7
1,901,588	-		BT1542	0.34	-2.4
1,901,595	+		BT1542	0.35	+0.4
1,901,638	-		BT1542	0.38	-0.9
1,901,681	-		BT1542	0.41	-2.8
1,901,884	+		BT1542	0.56	-2.2
1,901,884	+		BT1542	0.56	-4.5
1,902,009	-		BT1542	0.65	+1.4
1,902,012	+		BT1542	0.65	-2.0