Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1485

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
1,830,190	-		BT1484	0.81	+0.6
1,830,457	-				-0.5
1,830,565	-				+0.7
1,830,699	-				-1.0
1,830,737	+				-0.0
1,830,831	+		BT1485	0.12	-0.7
1,830,911	+		BT1485	0.21	-2.1
1,830,932	-		BT1485	0.23	-2.6
1,830,951	-		BT1485	0.25	+0.5
1,831,065	+		BT1485	0.37	-0.3
1,831,066	-		BT1485	0.38	-0.2
1,831,069	+		BT1485	0.38	-3.2
1,831,069	+		BT1485	0.38	-1.6
1,831,069	+		BT1485	0.38	-1.2
1,831,070	-		BT1485	0.38	-0.6
1,831,154	+		BT1485	0.47	-0.6
1,831,193	+		BT1485	0.51	-2.1
1,831,194	-		BT1485	0.51	-0.2
1,831,294	+		BT1485	0.62	-2.2
1,831,313	-		BT1485	0.64	-2.2
1,831,323	-		BT1485	0.65	+2.4
1,831,326	+		BT1485	0.65	-2.1
1,831,565	+				+1.9
1,831,567	+				-2.9
1,831,593	-				+0.4
1,831,837	+				-0.8
1,831,849	+				-0.1
1,831,882	+				-0.9
1,831,883	-				-0.6
1,831,944	-				+2.8
1,831,982	-				+1.0
1,831,994	+				+0.4
1,832,224	+				+1.3
1,832,229	+				+0.7
1,832,300	-				-1.9
1,832,324	+				-2.0
1,832,325	-				-3.0
1,832,334	-				-1.4
1,832,337	+				-3.2
1,832,403	+				-2.6
1,832,486	-				-4.0
1,832,520	-				+0.4
1,832,520	-				-2.0
1,832,524	-				-1.6
1,832,552	+				+0.4
1,832,600	-				-2.7
1,832,616	-				+1.0