Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1096

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
1,382,277	+		BT1094	0.16	-0.7
1,382,311	-		BT1094	0.31	-2.0
1,382,327	-		BT1094	0.38	-0.6
1,382,363	+		BT1094	0.53	+0.0
1,382,390	-		BT1094	0.64	-1.4
1,382,462	+				+0.5
1,382,700	-				+0.3
1,382,700	-				+0.3
1,382,921	-		BT1095	0.11	-0.9
1,382,923	-		BT1095	0.11	-0.8
1,382,923	-		BT1095	0.11	+0.7
1,382,982	-		BT1095	0.30	-2.0
1,382,982	-		BT1095	0.30	-0.2
1,382,986	-		BT1095	0.31	-1.2
1,382,986	-		BT1095	0.31	+0.9
1,383,073	-		BT1095	0.59	-1.5
1,383,202	+				+0.7
1,383,217	+				-2.8
1,383,219	+				+1.4
1,383,219	+				-1.0
1,383,339	+		BT1096	0.28	-2.4
1,383,346	+		BT1096	0.30	-0.9
1,383,346	+		BT1096	0.30	-1.9
1,383,411	+		BT1096	0.44	-1.1
1,383,411	+		BT1096	0.44	-1.3
1,383,448	+		BT1096	0.52	-2.6
1,383,501	+		BT1096	0.63	+0.9
1,383,501	+		BT1096	0.63	+0.6
1,383,502	-		BT1096	0.63	-3.1
1,383,502	-		BT1096	0.63	-0.5
1,383,566	+		BT1096	0.77	-0.4
1,383,607	+		BT1096	0.86	-3.5
1,383,608	-		BT1096	0.86	-0.1
1,383,616	-		BT1096	0.88	-2.0
1,383,649	-				+0.6
1,383,688	+				+0.6
1,383,897	-		BT1097	0.19	-2.0
1,383,897	-		BT1097	0.19	-2.4
1,383,902	+		BT1097	0.21	+1.5
1,383,951	-		BT1097	0.40	-2.0
1,383,951	-		BT1097	0.40	-1.4
1,383,966	-		BT1097	0.46	-1.4
1,383,989	-		BT1097	0.55	-1.7
1,384,147	+				+0.0
1,384,176	+				-2.4
1,384,331	+				+0.7
1,384,470	-				-1.3
1,384,553	-				-1.8
1,384,560	+				-1.0
1,384,656	+				+0.2