Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5592

Experiment: Chloramphenicol 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.004 mg/ml
6,408,825	+				-0.8
6,408,825	+				+0.5
6,408,825	+				-1.9
6,408,825	+				+0.1
6,408,826	-				+1.0
6,408,826	-				-0.2
6,408,826	-				-1.3
6,408,826	-				-0.3
6,408,826	-				+0.7
6,408,834	+		Pf6N2E2_5591	0.10	+0.5
6,408,834	+		Pf6N2E2_5591	0.10	+0.9
6,408,834	+		Pf6N2E2_5591	0.10	-0.3
6,408,834	+		Pf6N2E2_5591	0.10	-0.3
6,408,835	-		Pf6N2E2_5591	0.10	+0.5
6,408,835	-		Pf6N2E2_5591	0.10	+0.6
6,408,905	+		Pf6N2E2_5591	0.25	+0.8
6,408,905	+		Pf6N2E2_5591	0.25	+0.4
6,408,905	+		Pf6N2E2_5591	0.25	+0.0
6,408,905	+		Pf6N2E2_5591	0.25	+0.2
6,408,910	+		Pf6N2E2_5591	0.26	-0.4
6,408,910	+		Pf6N2E2_5591	0.26	-0.2
6,408,911	-		Pf6N2E2_5591	0.26	+0.5
6,408,920	-		Pf6N2E2_5591	0.28	-0.6
6,408,920	-		Pf6N2E2_5591	0.28	+0.7
6,408,950	+		Pf6N2E2_5591	0.34	+0.1
6,408,950	+		Pf6N2E2_5591	0.34	-0.2
6,408,951	-		Pf6N2E2_5591	0.34	+1.4
6,408,951	-		Pf6N2E2_5591	0.34	-0.5
6,408,951	-		Pf6N2E2_5591	0.34	+0.8
6,408,986	+		Pf6N2E2_5591	0.42	+0.6
6,408,987	-		Pf6N2E2_5591	0.42	-0.0
6,408,987	-		Pf6N2E2_5591	0.42	+0.4
6,408,987	-		Pf6N2E2_5591	0.42	+0.1
6,408,987	-		Pf6N2E2_5591	0.42	-1.0
6,408,987	-		Pf6N2E2_5591	0.42	-0.8
6,409,029	-		Pf6N2E2_5591	0.51	+0.5
6,409,149	+		Pf6N2E2_5591	0.75	+1.0
6,409,217	+		Pf6N2E2_5591	0.89	+1.3
6,409,217	+		Pf6N2E2_5591	0.89	-0.4
6,409,271	+				+0.0
6,409,385	+				-1.1
6,409,392	+				-0.7
6,409,396	+				-1.5
6,409,491	+				-1.8
6,409,619	+				-1.3
6,409,619	+				+0.0
6,409,626	+				-0.8
6,409,627	-				-0.6
6,409,677	-				-2.3
6,409,691	+				-2.7
6,409,786	+				+0.4
6,409,812	+		Pf6N2E2_5592	0.12	+0.7
6,409,871	+		Pf6N2E2_5592	0.21	+0.1
6,410,034	+		Pf6N2E2_5592	0.47	-0.6
6,410,035	-		Pf6N2E2_5592	0.48	-1.3
6,410,035	-		Pf6N2E2_5592	0.48	-1.5
6,410,035	-		Pf6N2E2_5592	0.48	-1.2
6,410,038	+		Pf6N2E2_5592	0.48	+0.5
6,410,038	+		Pf6N2E2_5592	0.48	+1.0
6,410,038	+		Pf6N2E2_5592	0.48	+0.5
6,410,038	+		Pf6N2E2_5592	0.48	-0.5
6,410,038	+		Pf6N2E2_5592	0.48	+0.5
6,410,038	+		Pf6N2E2_5592	0.48	-0.9
6,410,038	+		Pf6N2E2_5592	0.48	-0.2
6,410,039	-		Pf6N2E2_5592	0.48	-1.7
6,410,039	-		Pf6N2E2_5592	0.48	-0.9
6,410,039	-		Pf6N2E2_5592	0.48	-0.7
6,410,039	-		Pf6N2E2_5592	0.48	-0.8
6,410,039	-		Pf6N2E2_5592	0.48	-3.1
6,410,057	+		Pf6N2E2_5592	0.51	-0.5
6,410,068	+		Pf6N2E2_5592	0.53	-0.6
6,410,068	+		Pf6N2E2_5592	0.53	-0.1
6,410,068	+		Pf6N2E2_5592	0.53	-0.4
6,410,069	-		Pf6N2E2_5592	0.53	+0.6
6,410,126	+		Pf6N2E2_5592	0.62	+0.3
6,410,276	+		Pf6N2E2_5592	0.86	+0.1
6,410,280	+		Pf6N2E2_5592	0.87	+0.8
6,410,280	+		Pf6N2E2_5592	0.87	-1.1
6,410,280	+		Pf6N2E2_5592	0.87	+0.4
6,410,281	-		Pf6N2E2_5592	0.87	+0.4
6,410,380	+				-0.1
6,410,380	+				-0.0
6,410,387	+				-0.6
6,410,413	+				-0.2
6,410,572	+		Pf6N2E2_5593	0.84	-1.1
6,410,572	+		Pf6N2E2_5593	0.84	-1.1
6,410,572	+		Pf6N2E2_5593	0.84	-0.3
6,410,573	-		Pf6N2E2_5593	0.84	-0.1
6,410,573	-		Pf6N2E2_5593	0.84	+0.7
6,410,573	-		Pf6N2E2_5593	0.84	+0.2
6,410,573	-		Pf6N2E2_5593	0.84	-1.1
6,410,573	-		Pf6N2E2_5593	0.84	-0.5
6,410,618	+				-0.6
6,410,619	-				+1.8
6,410,640	+				-1.6
6,410,640	+				-0.2
6,410,640	+				-0.5
6,410,640	+				+0.0
6,410,641	-				-0.4
6,410,641	-				-1.4
6,410,641	-				-0.4
6,410,641	-				-2.0
6,410,641	-				+0.6
6,410,641	-				-0.5
6,410,641	-				-1.5
6,410,641	-				-1.1
6,410,641	-				+0.6
6,410,735	-				-0.0
6,410,742	+				-0.7
6,410,743	-				+0.7
6,411,124	+		Pf6N2E2_5594	0.65	+0.3
6,411,124	+		Pf6N2E2_5594	0.65	+0.7
6,411,124	+		Pf6N2E2_5594	0.65	-0.6
6,411,154	+		Pf6N2E2_5594	0.70	-0.9
6,411,154	+		Pf6N2E2_5594	0.70	-0.6
6,411,154	+		Pf6N2E2_5594	0.70	-0.2
6,411,154	+		Pf6N2E2_5594	0.70	+0.5
6,411,155	-		Pf6N2E2_5594	0.70	+0.4
6,411,155	-		Pf6N2E2_5594	0.70	+0.3
6,411,171	-		Pf6N2E2_5594	0.72	-0.5
6,411,171	-		Pf6N2E2_5594	0.72	+0.3
6,411,171	-		Pf6N2E2_5594	0.72	-0.0
6,411,272	-		Pf6N2E2_5594	0.88	-0.2
6,411,321	+				-1.6