Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5093

Experiment: Chloramphenicol 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.004 mg/ml
5,874,972	+				+0.9
5,874,972	+				+0.6
5,874,973	-				+0.5
5,874,973	-				+0.1
5,874,981	-				+1.5
5,875,064	-				+0.7
5,875,064	-				-0.2
5,875,064	-				-0.5
5,875,064	-				+0.2
5,875,064	-				+1.7
5,875,079	-				-0.7
5,875,079	-				-0.0
5,875,124	+		Pf6N2E2_5092	0.13	+0.5
5,875,124	+		Pf6N2E2_5092	0.13	+0.0
5,875,125	-		Pf6N2E2_5092	0.13	+0.1
5,875,125	-		Pf6N2E2_5092	0.13	+0.2
5,875,125	-		Pf6N2E2_5092	0.13	-0.1
5,875,125	-		Pf6N2E2_5092	0.13	-0.2
5,875,125	-		Pf6N2E2_5092	0.13	+0.1
5,875,237	+		Pf6N2E2_5092	0.36	+0.5
5,875,237	+		Pf6N2E2_5092	0.36	-0.7
5,875,238	-		Pf6N2E2_5092	0.36	-0.1
5,875,238	-		Pf6N2E2_5092	0.36	+0.6
5,875,238	-		Pf6N2E2_5092	0.36	-0.1
5,875,238	-		Pf6N2E2_5092	0.36	+0.6
5,875,238	-		Pf6N2E2_5092	0.36	+1.0
5,875,328	-		Pf6N2E2_5092	0.54	+0.4
5,875,382	+		Pf6N2E2_5092	0.65	+0.0
5,875,383	-		Pf6N2E2_5092	0.66	-0.0
5,875,383	-		Pf6N2E2_5092	0.66	-0.2
5,875,512	+				+0.7
5,875,550	+				-0.1
5,875,550	+				+0.8
5,875,550	+				+0.3
5,875,550	+				-1.6
5,875,551	-				+0.6
5,875,551	-				+0.6
5,875,551	-				+0.5
5,875,551	-				-0.5
5,875,551	-				-0.0
5,875,554	+				+0.1
5,875,554	+				+0.5
5,875,554	+				-0.1
5,875,554	+				+0.4
5,875,554	+				-0.1
5,875,554	+				-0.2
5,875,554	+				-0.2
5,875,554	+				+0.1
5,875,554	+				+0.3
5,875,554	+				+0.1
5,875,554	+				-0.4
5,875,554	+				-0.2
5,875,555	-				-0.2
5,875,555	-				-0.0
5,875,555	-				+0.3
5,875,555	-				-0.3
5,875,555	-				+0.7
5,875,555	-				+0.2
5,875,555	-				+0.5
5,875,555	-				+0.3
5,875,555	-				+0.7
5,875,555	-				+0.5
5,875,565	+				+0.2
5,875,565	+				+0.3
5,875,565	+				-0.0
5,875,566	-				+0.4
5,875,566	-				+0.2
5,875,566	-				+0.0
5,875,566	-				+0.1
5,875,566	-				+0.6
5,875,566	-				-0.2
5,875,566	-				-0.5
5,875,597	+				+1.0
5,875,598	-				+0.1
5,875,646	+				+0.3
5,875,646	+				-1.3
5,875,738	-				+1.4
5,875,738	-				+0.5
5,875,773	-				-0.2
5,875,796	-				-0.7
5,875,796	-				-0.5
5,875,813	+				+0.3
5,875,813	+				-0.1
5,875,813	+				-0.1
5,875,813	+				+0.6
5,875,813	+				-0.1
5,875,814	-				-0.2
5,875,814	-				+0.7
5,875,814	-				-1.6
5,875,814	-				-0.5
5,875,814	-				-0.8
5,875,814	-				-0.5
5,875,814	-				-0.1
5,875,814	-				-1.3
5,875,814	-				-0.4
5,875,814	-				-0.7
5,875,814	-				-1.2
5,875,814	-				-0.1
5,875,908	+				-0.6
5,875,909	-				-0.7
5,876,002	+				-0.6
5,876,009	+				-0.4
5,876,009	+				-0.6
5,876,009	+				-0.5
5,876,009	+				-0.7
5,876,009	+				-1.1
5,876,009	+				-1.1
5,876,009	+				-0.0
5,876,010	-				-1.1
5,876,010	-				-0.6
5,876,010	-				-0.3
5,876,010	-				-0.7
5,876,059	+				-1.4
5,876,107	+		Pf6N2E2_5093	0.12	-0.5
5,876,108	-		Pf6N2E2_5093	0.12	-1.0
5,876,108	-		Pf6N2E2_5093	0.12	-0.8
5,876,164	-		Pf6N2E2_5093	0.14	-0.3
5,876,248	+		Pf6N2E2_5093	0.17	-1.4
5,876,249	-		Pf6N2E2_5093	0.17	-1.2
5,876,249	-		Pf6N2E2_5093	0.17	-0.8
5,876,249	-		Pf6N2E2_5093	0.17	-0.3
5,876,293	+		Pf6N2E2_5093	0.19	-0.7
5,876,294	-		Pf6N2E2_5093	0.19	-0.4
5,876,294	-		Pf6N2E2_5093	0.19	-0.9
5,876,294	-		Pf6N2E2_5093	0.19	-0.9
5,876,351	-		Pf6N2E2_5093	0.22	-0.5
5,876,351	-		Pf6N2E2_5093	0.22	-0.3
5,876,605	+		Pf6N2E2_5093	0.32	-1.3
5,876,606	-		Pf6N2E2_5093	0.32	-0.5
5,876,653	+		Pf6N2E2_5093	0.34	-0.9
5,876,653	+		Pf6N2E2_5093	0.34	-1.1
5,876,653	+		Pf6N2E2_5093	0.34	-0.6
5,876,654	-		Pf6N2E2_5093	0.34	-0.9
5,876,654	-		Pf6N2E2_5093	0.34	-1.6
5,876,654	-		Pf6N2E2_5093	0.34	+0.4
5,876,734	+		Pf6N2E2_5093	0.37	-0.4
5,876,735	-		Pf6N2E2_5093	0.37	-0.4
5,876,735	-		Pf6N2E2_5093	0.37	-0.6
5,876,735	-		Pf6N2E2_5093	0.37	-0.2
5,876,735	-		Pf6N2E2_5093	0.37	-0.4
5,876,833	+		Pf6N2E2_5093	0.41	-0.3
5,876,833	+		Pf6N2E2_5093	0.41	-0.9
5,876,833	+		Pf6N2E2_5093	0.41	-0.5
5,876,834	-		Pf6N2E2_5093	0.41	-1.2
5,876,857	+		Pf6N2E2_5093	0.42	-1.2
5,876,858	-		Pf6N2E2_5093	0.42	-0.8
5,876,858	-		Pf6N2E2_5093	0.42	-1.3
5,876,866	+		Pf6N2E2_5093	0.43	-1.1
5,876,867	-		Pf6N2E2_5093	0.43	-1.4
5,877,103	+		Pf6N2E2_5093	0.52	-1.1
5,877,103	+		Pf6N2E2_5093	0.52	-1.8
5,877,103	+		Pf6N2E2_5093	0.52	-1.8
5,877,103	+		Pf6N2E2_5093	0.52	-0.9
5,877,104	-		Pf6N2E2_5093	0.52	-1.4
5,877,104	-		Pf6N2E2_5093	0.52	-0.8
5,877,104	-		Pf6N2E2_5093	0.52	-0.2
5,877,104	-		Pf6N2E2_5093	0.52	-0.9
5,877,104	-		Pf6N2E2_5093	0.52	-1.2
5,877,106	+		Pf6N2E2_5093	0.53	-0.3
5,877,106	+		Pf6N2E2_5093	0.53	+0.1
5,877,106	+		Pf6N2E2_5093	0.53	-0.6
5,877,106	+		Pf6N2E2_5093	0.53	-0.7
5,877,107	-		Pf6N2E2_5093	0.53	-0.6
5,877,107	-		Pf6N2E2_5093	0.53	-1.2
5,877,107	-		Pf6N2E2_5093	0.53	-0.9
5,877,286	+		Pf6N2E2_5093	0.60	-1.1
5,877,286	+		Pf6N2E2_5093	0.60	-1.1
5,877,286	+		Pf6N2E2_5093	0.60	-1.8
5,877,286	+		Pf6N2E2_5093	0.60	-0.6
5,877,286	+		Pf6N2E2_5093	0.60	-1.0
5,877,287	-		Pf6N2E2_5093	0.60	-0.5
5,877,287	-		Pf6N2E2_5093	0.60	-1.4
5,877,287	-		Pf6N2E2_5093	0.60	-0.4
5,877,287	-		Pf6N2E2_5093	0.60	-2.7
5,877,411	+		Pf6N2E2_5093	0.65	-0.2
5,877,545	+		Pf6N2E2_5093	0.71	-0.6
5,877,545	+		Pf6N2E2_5093	0.71	-1.8
5,877,545	+		Pf6N2E2_5093	0.71	-1.1
5,877,546	-		Pf6N2E2_5093	0.71	-1.1
5,877,684	+		Pf6N2E2_5093	0.76	-0.4
5,877,760	+		Pf6N2E2_5093	0.79	-1.3
5,877,760	+		Pf6N2E2_5093	0.79	+0.0
5,877,761	-		Pf6N2E2_5093	0.79	-0.1
5,877,761	-		Pf6N2E2_5093	0.79	-0.4
5,877,761	-		Pf6N2E2_5093	0.79	-1.0
5,877,766	+		Pf6N2E2_5093	0.80	-0.3
5,877,804	+		Pf6N2E2_5093	0.81	-2.1
5,877,805	-		Pf6N2E2_5093	0.81	-1.2
5,878,051	+				-0.8
5,878,051	+				-0.7
5,878,051	+				-0.5
5,878,051	+				+0.0
5,878,052	-				-1.1
5,878,379	-				-0.1
5,878,393	+				+0.8
5,878,492	+				-0.5
5,878,565	+				+0.1
5,878,566	-				+0.5
5,878,566	-				-0.5
5,878,566	-				+0.5
5,878,665	+				+1.6
5,878,666	-				+0.9
5,878,671	+				+0.2
5,878,776	+		Pf6N2E2_5094	0.41	+0.8
5,878,807	+		Pf6N2E2_5094	0.54	-0.2
5,878,832	+		Pf6N2E2_5094	0.63	+0.7
5,878,832	+		Pf6N2E2_5094	0.63	-0.5
5,878,832	+		Pf6N2E2_5094	0.63	+1.0
5,878,832	+		Pf6N2E2_5094	0.63	+0.2
5,878,832	+		Pf6N2E2_5094	0.63	+0.1
5,878,832	+		Pf6N2E2_5094	0.63	+0.6
5,878,833	-		Pf6N2E2_5094	0.64	+0.5
5,878,833	-		Pf6N2E2_5094	0.64	+0.1
5,878,833	-		Pf6N2E2_5094	0.64	+0.2
5,878,833	-		Pf6N2E2_5094	0.64	-0.1
5,878,833	-		Pf6N2E2_5094	0.64	-0.9
5,878,833	-		Pf6N2E2_5094	0.64	-0.7
5,878,951	+				+0.1
5,878,952	-				+0.3
5,879,017	+				+0.6
5,879,017	+				-0.5
5,879,017	+				-0.3
5,879,017	+				-0.8
5,879,018	-				-0.1
5,879,018	-				-0.3
5,879,018	-				+0.3
5,879,018	-				+0.0
5,879,019	+				+0.5
5,879,019	+				-0.2
5,879,019	+				+0.2
5,879,019	+				+0.2
5,879,019	+				-0.6
5,879,019	+				+0.2
5,879,020	-				+0.5
5,879,020	-				-1.1
5,879,020	-				-0.6
5,879,083	+				-0.0
5,879,083	+				-1.2
5,879,083	+				+0.1
5,879,083	+				+0.3
5,879,083	+				-1.3
5,879,083	+				+0.3
5,879,083	+				+0.2
5,879,083	+				-0.7
5,879,084	-				-0.7
5,879,084	-				+0.3
5,879,084	-				+0.8
5,879,084	-				-0.7
5,879,084	-				+0.1
5,879,084	-				+0.7
5,879,113	+		Pf6N2E2_5095	0.12	-0.3