Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02832

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
2,985,019	+		CCNA_02830	0.30	+1.3
2,985,057	+		CCNA_02830	0.53	+0.6
2,985,057	+		CCNA_02830	0.53	-0.1
2,985,065	-		CCNA_02830	0.57	+0.8
2,985,091	-		CCNA_02830	0.73	-1.5
2,985,120	-		CCNA_02830	0.89	-0.9
2,985,126	+				-0.1
2,985,199	-				+1.4
2,985,263	-				-0.3
2,985,269	+				+0.5
2,985,282	+		CCNA_02831	0.12	+0.4
2,985,296	+		CCNA_02831	0.14	-0.3
2,985,296	+		CCNA_02831	0.14	-1.1
2,985,296	+		CCNA_02831	0.14	+0.2
2,985,304	-		CCNA_02831	0.16	-1.5
2,985,304	-		CCNA_02831	0.16	-1.8
2,985,306	+		CCNA_02831	0.16	-2.2
2,985,376	+		CCNA_02831	0.29	-0.7
2,985,449	-		CCNA_02831	0.42	+0.3
2,985,449	-		CCNA_02831	0.42	-0.1
2,985,473	+		CCNA_02831	0.46	+0.8
2,985,478	+		CCNA_02831	0.47	+0.6
2,985,497	+		CCNA_02831	0.50	-0.1
2,985,505	-		CCNA_02831	0.52	-0.8
2,985,549	+		CCNA_02831	0.60	-0.9
2,985,555	+		CCNA_02831	0.61	+1.3
2,985,556	+		CCNA_02831	0.61	+3.3
2,985,557	-		CCNA_02831	0.61	+1.1
2,985,557	-		CCNA_02831	0.61	+1.3
2,985,572	+		CCNA_02831	0.64	+0.5
2,985,572	+		CCNA_02831	0.64	-1.3
2,985,574	+		CCNA_02831	0.64	+0.5
2,985,578	+		CCNA_02831	0.65	-0.8
2,985,580	-		CCNA_02831	0.65	+0.5
2,985,588	+		CCNA_02831	0.67	-0.7
2,985,594	+		CCNA_02831	0.68	-0.7
2,985,594	+		CCNA_02831	0.68	-0.3
2,985,594	+		CCNA_02831	0.68	-1.9
2,985,594	+		CCNA_02831	0.68	-0.0
2,985,594	+		CCNA_02831	0.68	-0.3
2,985,595	-		CCNA_02831	0.68	-0.1
2,985,602	-		CCNA_02831	0.69	+2.0
2,985,602	-		CCNA_02831	0.69	+1.1
2,985,602	-		CCNA_02831	0.69	+0.5
2,985,602	-		CCNA_02831	0.69	+0.5
2,985,602	-		CCNA_02831	0.69	-0.8
2,985,602	-		CCNA_02831	0.69	+1.0
2,985,602	-		CCNA_02831	0.69	+1.6
2,985,639	+		CCNA_02831	0.76	-0.7
2,985,642	+		CCNA_02831	0.76	+0.3
2,985,649	+		CCNA_02831	0.78	-0.3
2,985,649	+		CCNA_02831	0.78	+0.8
2,985,649	+		CCNA_02831	0.78	-0.9
2,985,649	+		CCNA_02831	0.78	-0.1
2,985,649	+		CCNA_02831	0.78	-0.7
2,985,649	+		CCNA_02831	0.78	+0.6
2,985,649	+		CCNA_02831	0.78	-0.4
2,985,650	-		CCNA_02831	0.78	-1.5
2,985,650	-		CCNA_02831	0.78	+0.2
2,985,657	-		CCNA_02831	0.79	-0.1
2,985,657	-		CCNA_02831	0.79	+0.3
2,985,657	-		CCNA_02831	0.79	-0.5
2,985,657	-		CCNA_02831	0.79	+1.1
2,985,657	-		CCNA_02831	0.79	-1.1
2,985,657	-		CCNA_02831	0.79	-0.7
2,985,685	+		CCNA_02831	0.84	-0.4
2,985,709	+		CCNA_02831	0.88	-0.0
2,985,719	+				-0.2
2,985,719	+				-0.4
2,985,720	+				+1.3
2,985,720	+				+1.1
2,985,720	+				+1.3
2,985,728	-				-0.3
2,985,728	-				-1.2
2,985,748	-				-0.7
2,985,753	+				-0.5
2,985,753	-				+1.1
2,985,822	-				+1.5
2,985,851	-				+0.9
2,985,859	-				+1.5
2,985,878	+				+0.9
2,985,888	+				+0.8
2,985,932	+				-0.9
2,985,932	+				+0.4
2,985,940	-				+0.0
2,985,988	+				-0.8
2,985,988	+				+1.4
2,985,996	-		CCNA_02832	0.10	+0.9
2,985,996	-		CCNA_02832	0.10	+1.0
2,985,996	-		CCNA_02832	0.10	+1.5
2,985,996	-		CCNA_02832	0.10	+1.4
2,985,996	-		CCNA_02832	0.10	+1.9
2,985,996	-		CCNA_02832	0.10	+1.7
2,985,996	-		CCNA_02832	0.10	+1.6
2,985,996	-		CCNA_02832	0.10	+0.5
2,985,996	-		CCNA_02832	0.10	+2.5
2,985,996	-		CCNA_02832	0.10	+1.4
2,985,996	-		CCNA_02832	0.10	+3.7
2,986,002	-		CCNA_02832	0.11	+0.8
2,986,018	+		CCNA_02832	0.12	+0.4
2,986,026	-		CCNA_02832	0.13	+0.1
2,986,047	-		CCNA_02832	0.14	-0.2
2,986,055	-		CCNA_02832	0.15	-0.9
2,986,063	-		CCNA_02832	0.16	+0.8
2,986,064	-		CCNA_02832	0.16	+0.7
2,986,070	+		CCNA_02832	0.16	+0.1
2,986,078	-		CCNA_02832	0.17	-0.0
2,986,107	+		CCNA_02832	0.19	-0.2
2,986,107	+		CCNA_02832	0.19	-1.3
2,986,115	-		CCNA_02832	0.20	-0.8
2,986,125	-		CCNA_02832	0.20	+0.3
2,986,136	+		CCNA_02832	0.21	+0.4
2,986,144	-		CCNA_02832	0.22	-0.6
2,986,169	+		CCNA_02832	0.24	+1.1
2,986,178	+		CCNA_02832	0.25	+0.8
2,986,201	+		CCNA_02832	0.26	+2.2
2,986,202	+		CCNA_02832	0.26	-0.5
2,986,209	-		CCNA_02832	0.27	-0.5
2,986,209	-		CCNA_02832	0.27	-0.2
2,986,209	-		CCNA_02832	0.27	+0.8
2,986,209	-		CCNA_02832	0.27	+1.1
2,986,210	-		CCNA_02832	0.27	+0.6
2,986,210	-		CCNA_02832	0.27	-0.7
2,986,227	-		CCNA_02832	0.28	+3.1
2,986,229	-		CCNA_02832	0.29	-1.1
2,986,264	+		CCNA_02832	0.31	+0.2
2,986,289	+		CCNA_02832	0.33	-1.1
2,986,368	-		CCNA_02832	0.40	+1.1
2,986,390	+		CCNA_02832	0.41	-1.4
2,986,390	+		CCNA_02832	0.41	+0.1
2,986,390	+		CCNA_02832	0.41	+1.5
2,986,407	+		CCNA_02832	0.43	-0.0
2,986,420	-		CCNA_02832	0.44	-0.6
2,986,441	-		CCNA_02832	0.45	-0.7
2,986,486	+		CCNA_02832	0.49	-0.7
2,986,486	+		CCNA_02832	0.49	+0.4
2,986,486	+		CCNA_02832	0.49	+0.2
2,986,518	-		CCNA_02832	0.51	-0.4
2,986,526	+		CCNA_02832	0.52	+1.8
2,986,565	-		CCNA_02832	0.55	+0.4
2,986,603	+		CCNA_02832	0.58	-0.2
2,986,603	+		CCNA_02832	0.58	+0.3
2,986,603	+		CCNA_02832	0.58	+1.0
2,986,603	+		CCNA_02832	0.58	-0.5
2,986,618	-		CCNA_02832	0.59	+2.7
2,986,634	+		CCNA_02832	0.61	+0.6
2,986,646	+		CCNA_02832	0.61	+0.5
2,986,646	+		CCNA_02832	0.61	+0.9
2,986,646	+		CCNA_02832	0.61	+0.2
2,986,654	-		CCNA_02832	0.62	+0.6
2,986,654	-		CCNA_02832	0.62	-0.7
2,986,689	-		CCNA_02832	0.65	-0.7
2,986,743	-		CCNA_02832	0.69	-1.4
2,986,747	+		CCNA_02832	0.69	-1.7
2,986,769	+		CCNA_02832	0.71	+1.3
2,986,769	+		CCNA_02832	0.71	+0.1
2,986,778	+		CCNA_02832	0.72	+0.1
2,986,786	-		CCNA_02832	0.72	-0.6
2,986,786	-		CCNA_02832	0.72	-0.0
2,986,828	+		CCNA_02832	0.76	+0.8
2,986,828	+		CCNA_02832	0.76	+0.1
2,986,828	+		CCNA_02832	0.76	+1.7
2,986,828	+		CCNA_02832	0.76	-0.2
2,986,835	+		CCNA_02832	0.76	-1.6
2,986,836	-		CCNA_02832	0.76	-1.6
2,986,836	-		CCNA_02832	0.76	+0.6
2,986,894	+		CCNA_02832	0.81	+0.4
2,986,907	+		CCNA_02832	0.82	-1.2
2,986,917	+		CCNA_02832	0.83	-0.2
2,986,917	+		CCNA_02832	0.83	-1.0
2,986,917	+		CCNA_02832	0.83	+0.8
2,986,917	+		CCNA_02832	0.83	-0.2
2,986,917	+		CCNA_02832	0.83	+2.1
2,986,917	+		CCNA_02832	0.83	+0.5
2,986,925	-		CCNA_02832	0.83	-1.7
2,986,925	-		CCNA_02832	0.83	+0.3
2,986,925	-		CCNA_02832	0.83	-0.7
2,986,925	-		CCNA_02832	0.83	-0.9
2,986,925	-		CCNA_02832	0.83	-1.8
2,986,933	+		CCNA_02832	0.84	+1.1
2,986,941	-		CCNA_02832	0.85	+0.3
2,986,941	-		CCNA_02832	0.85	+1.2
2,986,952	+		CCNA_02832	0.86	+0.0
2,986,986	+		CCNA_02832	0.88	+1.1
2,986,986	+		CCNA_02832	0.88	+1.1
2,986,986	+		CCNA_02832	0.88	+0.5
2,986,986	+		CCNA_02832	0.88	+1.4
2,986,994	-		CCNA_02832	0.89	+1.6
2,986,994	-		CCNA_02832	0.89	-0.1
2,986,994	-				+2.1
2,986,998	+		CCNA_02832	0.89	-0.2
2,987,006	-		CCNA_02832	0.90	-1.4
2,987,017	-				+4.1
2,987,026	+				-0.4
2,987,043	+				+1.1
2,987,051	-				-0.7
2,987,076	+				+1.0
2,987,076	+				+0.1
2,987,081	+				+1.3
2,987,081	+				-0.4
2,987,084	-				+1.2
2,987,084	-				-0.6
2,987,084	-				-0.4
2,987,102	+				-1.5
2,987,102	+				+0.2
2,987,102	+				-1.2
2,987,102	+				-0.5
2,987,102	+				+0.9
2,987,102	+				-1.2
2,987,102	+				+0.7
2,987,102	+				+0.3
2,987,102	+				+2.4
2,987,102	+				-0.4
2,987,110	-				-0.9
2,987,110	-				-0.3
2,987,110	-				+1.9
2,987,110	-				+1.8
2,987,110	-				+1.3
2,987,110	-				-0.1
2,987,110	-				+1.1
2,987,110	-				-0.4
2,987,110	-				+1.8
2,987,115	-				-1.2
2,987,119	-				+2.2
2,987,129	-				-0.5
2,987,140	+				-0.3
2,987,140	+				+0.3
2,987,148	-				-0.9
2,987,148	-				-1.6
2,987,150	-				+0.3
2,987,166	+				+0.5
2,987,168	+				-0.3
2,987,198	-				+0.9
2,987,198	-				-0.6
2,987,256	+		CCNA_02833	0.13	+0.6
2,987,256	+		CCNA_02833	0.13	-1.0
2,987,256	+		CCNA_02833	0.13	+0.7
2,987,264	-		CCNA_02833	0.14	+0.8
2,987,264	-		CCNA_02833	0.14	+0.2
2,987,264	-		CCNA_02833	0.14	+0.3
2,987,268	+		CCNA_02833	0.15	-0.3
2,987,309	-		CCNA_02833	0.20	+1.6
2,987,310	+		CCNA_02833	0.20	+1.8
2,987,310	+		CCNA_02833	0.20	-0.5
2,987,313	-		CCNA_02833	0.21	+0.7
2,987,315	+		CCNA_02833	0.21	-0.8
2,987,323	-				+1.8
2,987,324	+		CCNA_02833	0.22	-1.7
2,987,334	+		CCNA_02833	0.23	+0.0
2,987,357	+		CCNA_02833	0.26	-0.1
2,987,360	-		CCNA_02833	0.27	-0.5
2,987,365	-		CCNA_02833	0.27	+0.2
2,987,374	+		CCNA_02833	0.29	+1.8
2,987,392	+		CCNA_02833	0.31	+1.0
2,987,392	+		CCNA_02833	0.31	-0.6
2,987,400	-		CCNA_02833	0.32	-0.3
2,987,400	-		CCNA_02833	0.32	+0.1
2,987,400	-		CCNA_02833	0.32	+0.5
2,987,447	-		CCNA_02833	0.38	+1.0
2,987,447	-		CCNA_02833	0.38	+0.2
2,987,470	+		CCNA_02833	0.41	+0.6
2,987,473	-		CCNA_02833	0.42	+1.0
2,987,473	-		CCNA_02833	0.42	-2.2
2,987,510	+		CCNA_02833	0.46	-2.0
2,987,513	-		CCNA_02833	0.47	+0.3
2,987,532	-		CCNA_02833	0.49	+0.1
2,987,558	-		CCNA_02833	0.53	-0.9
2,987,591	-		CCNA_02833	0.57	+1.1
2,987,614	+		CCNA_02833	0.60	+0.3
2,987,627	-		CCNA_02833	0.62	+1.5
2,987,653	+		CCNA_02833	0.65	-0.6
2,987,696	+		CCNA_02833	0.71	-0.4
2,987,704	-		CCNA_02833	0.72	-1.6
2,987,709	+		CCNA_02833	0.73	-0.7
2,987,738	-		CCNA_02833	0.76	-1.1
2,987,752	+		CCNA_02833	0.78	+1.3
2,987,753	-		CCNA_02833	0.78	+1.5
2,987,780	-		CCNA_02833	0.82	+1.0
2,987,785	-		CCNA_02833	0.83	+0.4
2,987,803	-		CCNA_02833	0.85	+0.0
2,987,827	+		CCNA_02833	0.88	-0.2
2,987,832	+		CCNA_02833	0.89	+0.9
2,987,847	-				-1.6
2,987,858	-				+1.0
2,987,860	+				+1.1
2,987,886	-				+0.0
2,987,891	-				+0.7
2,987,904	-				-0.8
2,987,904	-				-0.7
2,987,904	-				+0.9
2,987,904	-				+0.3
2,987,949	+				-1.4
2,987,949	+				-0.3
2,987,957	-				+0.0
2,987,986	-				+0.9
2,988,006	-				-1.5
2,988,027	-				+1.7
2,988,124	+		CCNA_02834	0.19	+0.7