Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02527

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
2,675,020	+		CCNA_02526	0.21	-0.7
2,675,040	+		CCNA_02526	0.23	-0.3
2,675,040	+		CCNA_02526	0.23	+0.7
2,675,048	-		CCNA_02526	0.24	+0.2
2,675,081	+		CCNA_02526	0.26	+0.8
2,675,081	+		CCNA_02526	0.26	-0.5
2,675,089	-		CCNA_02526	0.27	+0.9
2,675,142	+		CCNA_02526	0.31	-0.3
2,675,142	+		CCNA_02526	0.31	-0.1
2,675,143	+		CCNA_02526	0.31	+0.4
2,675,187	-		CCNA_02526	0.34	+2.3
2,675,240	+		CCNA_02526	0.38	+0.8
2,675,245	+		CCNA_02526	0.39	-0.5
2,675,265	-		CCNA_02526	0.40	-0.4
2,675,270	-		CCNA_02526	0.41	-0.5
2,675,274	+		CCNA_02526	0.41	+1.7
2,675,275	+		CCNA_02526	0.41	+0.7
2,675,275	-		CCNA_02526	0.41	+1.3
2,675,283	-		CCNA_02526	0.42	+0.9
2,675,304	+		CCNA_02526	0.43	+0.9
2,675,320	+		CCNA_02526	0.44	+0.3
2,675,345	-		CCNA_02526	0.46	-1.0
2,675,371	+		CCNA_02526	0.48	-0.3
2,675,401	+		CCNA_02526	0.51	+0.4
2,675,424	+		CCNA_02526	0.52	+1.4
2,675,455	+		CCNA_02526	0.55	-1.4
2,675,485	+		CCNA_02526	0.57	+0.9
2,675,485	+		CCNA_02526	0.57	+0.3
2,675,502	+		CCNA_02526	0.58	+1.7
2,675,502	+		CCNA_02526	0.58	-1.1
2,675,502	+		CCNA_02526	0.58	-1.0
2,675,502	+		CCNA_02526	0.58	+0.7
2,675,503	+		CCNA_02526	0.59	-0.1
2,675,510	-		CCNA_02526	0.59	+1.3
2,675,510	-		CCNA_02526	0.59	-0.2
2,675,510	-		CCNA_02526	0.59	+0.7
2,675,533	-		CCNA_02526	0.61	+0.9
2,675,582	+		CCNA_02526	0.65	+0.0
2,675,592	+		CCNA_02526	0.65	+1.0
2,675,634	+		CCNA_02526	0.69	+0.4
2,675,636	-		CCNA_02526	0.69	-1.1
2,675,642	-		CCNA_02526	0.69	-0.8
2,675,642	-		CCNA_02526	0.69	-0.7
2,675,654	-		CCNA_02526	0.70	+0.9
2,675,661	-		CCNA_02526	0.71	+0.5
2,675,666	-				+1.9
2,675,684	+		CCNA_02526	0.72	+1.3
2,675,692	-		CCNA_02526	0.73	+0.5
2,675,755	+		CCNA_02526	0.78	+1.5
2,675,777	-		CCNA_02526	0.80	+0.9
2,675,778	+		CCNA_02526	0.80	-0.9
2,675,786	-		CCNA_02526	0.80	+1.9
2,675,788	-		CCNA_02526	0.80	+0.0
2,675,841	+		CCNA_02526	0.84	+0.4
2,675,841	+		CCNA_02526	0.84	+1.0
2,675,848	+		CCNA_02526	0.85	+0.5
2,675,985	+				-0.5
2,675,992	+				-0.3
2,676,059	+				+0.9
2,676,059	+				+0.4
2,676,059	+				+0.4
2,676,067	-		CCNA_02527	0.11	+0.5
2,676,067	-		CCNA_02527	0.11	-0.8
2,676,067	-		CCNA_02527	0.11	+0.4
2,676,074	+		CCNA_02527	0.12	-0.7
2,676,082	-		CCNA_02527	0.13	-1.5
2,676,120	+		CCNA_02527	0.21	-0.5
2,676,189	+		CCNA_02527	0.34	-1.0
2,676,212	-		CCNA_02527	0.38	-1.1
2,676,215	+		CCNA_02527	0.38	-0.3
2,676,215	+		CCNA_02527	0.38	-0.9
2,676,215	+		CCNA_02527	0.38	-1.2
2,676,223	-		CCNA_02527	0.40	+0.2
2,676,245	-		CCNA_02527	0.44	+0.4
2,676,247	+		CCNA_02527	0.44	-0.1
2,676,290	+		CCNA_02527	0.53	+1.9
2,676,292	+		CCNA_02527	0.53	+0.2
2,676,308	-		CCNA_02527	0.56	+0.5
2,676,329	+		CCNA_02527	0.60	-0.7
2,676,357	-		CCNA_02527	0.65	-0.5
2,676,361	-		CCNA_02527	0.66	-1.1
2,676,393	+		CCNA_02527	0.72	-0.9
2,676,401	-		CCNA_02527	0.73	-1.2
2,676,485	-		CCNA_02527	0.89	-0.1
2,676,488	+		CCNA_02527	0.90	-0.3
2,676,496	-				-1.5
2,676,496	-				-1.7
2,676,519	+				-1.7
2,676,558	+				+0.9
2,677,169	+				-0.3
2,677,248	-				-0.6
2,677,257	-				-0.6
2,677,304	+				+0.0
2,677,316	+				+0.4
2,677,316	+				+0.4
2,677,324	-				-0.6
2,677,355	+		CCNA_02529	0.12	-0.2
2,677,355	+		CCNA_02529	0.12	-0.3
2,677,359	+		CCNA_02529	0.12	+0.3
2,677,367	-		CCNA_02529	0.13	+1.4
2,677,367	-		CCNA_02529	0.13	-1.0
2,677,380	-		CCNA_02529	0.14	-0.3
2,677,399	+		CCNA_02529	0.16	-0.5
2,677,440	-		CCNA_02529	0.19	+2.9
2,677,451	-		CCNA_02529	0.20	-1.4
2,677,460	+		CCNA_02529	0.21	+0.9
2,677,460	+		CCNA_02529	0.21	-0.7
2,677,468	-		CCNA_02529	0.22	+0.3
2,677,473	+		CCNA_02529	0.22	-0.1
2,677,498	-		CCNA_02529	0.25	-0.2
2,677,500	+		CCNA_02529	0.25	+0.7